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Moc09g28720 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g28720
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr9:21542848..21543123
RNA-Seq ExpressionMoc09g28720
SyntenyMoc09g28720
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147763.1 uncharacterized protein LOC111016620 [Momordica charantia]1.6e-1576.56Show/hide
Query:  MENLTVKLHIEEDNRKGDKEPRKVEANVHIAEASRRHPKKNQVKTKNVNLGPRNDANKRIRAIC
        +ENLTVKL I+E+N KGDKEP+K EA  HIAEASRRHPKKNQ KTK  NLGPRND NK I AIC
Subjt:  MENLTVKLHIEEDNRKGDKEPRKVEANVHIAEASRRHPKKNQVKTKNVNLGPRNDANKRIRAIC

XP_022148559.1 uncharacterized protein LOC111017193 [Momordica charantia]1.8e-3082.42Show/hide
Query:  MENLTVKLHIEEDNRKGDKEPRKVEANVHIAEASRRHPKKNQVKTKNVNLGPRNDANKRIRAICWVCGNSGHIAANCRHKKGQSSNNCHEN
        MENLTVKL IEEDNRK DKEP+K EA  HI EASRRHPKKNQ KTK  N GPRNDANKRIRAICWVCG SGHIAAN RHKKGQSSNN   N
Subjt:  MENLTVKLHIEEDNRKGDKEPRKVEANVHIAEASRRHPKKNQVKTKNVNLGPRNDANKRIRAICWVCGNSGHIAANCRHKKGQSSNNCHEN

XP_022150041.1 uncharacterized protein LOC111018314 [Momordica charantia]4.8e-44100Show/hide
Query:  MENLTVKLHIEEDNRKGDKEPRKVEANVHIAEASRRHPKKNQVKTKNVNLGPRNDANKRIRAICWVCGNSGHIAANCRHKKGQSSNNCHEN
        MENLTVKLHIEEDNRKGDKEPRKVEANVHIAEASRRHPKKNQVKTKNVNLGPRNDANKRIRAICWVCGNSGHIAANCRHKKGQSSNNCHEN
Subjt:  MENLTVKLHIEEDNRKGDKEPRKVEANVHIAEASRRHPKKNQVKTKNVNLGPRNDANKRIRAICWVCGNSGHIAANCRHKKGQSSNNCHEN

XP_022152118.1 uncharacterized protein LOC111019908 [Momordica charantia]2.2e-2881.61Show/hide
Query:  MENLTVKLHIEEDNRKGDKEPRKVEANVHIAEASRRHPKKNQVKTKNVNLGPRNDANKRIRAICWVCGNSGHIAANCRHKKGQSSNN
        M+NLTVKL IEEDNRKGDKEP+KVEA  HI EASR HPKK   KTKNVNLG RNDANKRIR I  VCG SGHIAAN RHKKGQSSNN
Subjt:  MENLTVKLHIEEDNRKGDKEPRKVEANVHIAEASRRHPKKNQVKTKNVNLGPRNDANKRIRAICWVCGNSGHIAANCRHKKGQSSNN

XP_022155402.1 uncharacterized protein LOC111022547 [Momordica charantia]1.6e-3488.51Show/hide
Query:  MENLTVKLHIEEDNRKGDKEPRKVEANVHIAEASRRHPKKNQVKTKNVNLGPRNDANKRIRAICWVCGNSGHIAANCRHKKGQSSNN
        +ENLTVK+ IEEDNRKGDKEPRKVEAN HIAEASRRHPKKNQ KTKNVNLGPRN+ANKRIRAI WVCG S HIAANCRHKKGQ+SNN
Subjt:  MENLTVKLHIEEDNRKGDKEPRKVEANVHIAEASRRHPKKNQVKTKNVNLGPRNDANKRIRAICWVCGNSGHIAANCRHKKGQSSNN

TrEMBL top hitse value%identityAlignment
A0A6J1D271 uncharacterized protein LOC1110166207.8e-1676.56Show/hide
Query:  MENLTVKLHIEEDNRKGDKEPRKVEANVHIAEASRRHPKKNQVKTKNVNLGPRNDANKRIRAIC
        +ENLTVKL I+E+N KGDKEP+K EA  HIAEASRRHPKKNQ KTK  NLGPRND NK I AIC
Subjt:  MENLTVKLHIEEDNRKGDKEPRKVEANVHIAEASRRHPKKNQVKTKNVNLGPRNDANKRIRAIC

A0A6J1D4C8 uncharacterized protein LOC1110171938.6e-3182.42Show/hide
Query:  MENLTVKLHIEEDNRKGDKEPRKVEANVHIAEASRRHPKKNQVKTKNVNLGPRNDANKRIRAICWVCGNSGHIAANCRHKKGQSSNNCHEN
        MENLTVKL IEEDNRK DKEP+K EA  HI EASRRHPKKNQ KTK  N GPRNDANKRIRAICWVCG SGHIAAN RHKKGQSSNN   N
Subjt:  MENLTVKLHIEEDNRKGDKEPRKVEANVHIAEASRRHPKKNQVKTKNVNLGPRNDANKRIRAICWVCGNSGHIAANCRHKKGQSSNNCHEN

A0A6J1DA93 uncharacterized protein LOC1110183142.3e-44100Show/hide
Query:  MENLTVKLHIEEDNRKGDKEPRKVEANVHIAEASRRHPKKNQVKTKNVNLGPRNDANKRIRAICWVCGNSGHIAANCRHKKGQSSNNCHEN
        MENLTVKLHIEEDNRKGDKEPRKVEANVHIAEASRRHPKKNQVKTKNVNLGPRNDANKRIRAICWVCGNSGHIAANCRHKKGQSSNNCHEN
Subjt:  MENLTVKLHIEEDNRKGDKEPRKVEANVHIAEASRRHPKKNQVKTKNVNLGPRNDANKRIRAICWVCGNSGHIAANCRHKKGQSSNNCHEN

A0A6J1DE03 uncharacterized protein LOC1110199081.1e-2881.61Show/hide
Query:  MENLTVKLHIEEDNRKGDKEPRKVEANVHIAEASRRHPKKNQVKTKNVNLGPRNDANKRIRAICWVCGNSGHIAANCRHKKGQSSNN
        M+NLTVKL IEEDNRKGDKEP+KVEA  HI EASR HPKK   KTKNVNLG RNDANKRIR I  VCG SGHIAAN RHKKGQSSNN
Subjt:  MENLTVKLHIEEDNRKGDKEPRKVEANVHIAEASRRHPKKNQVKTKNVNLGPRNDANKRIRAICWVCGNSGHIAANCRHKKGQSSNN

A0A6J1DP87 uncharacterized protein LOC1110225477.5e-3588.51Show/hide
Query:  MENLTVKLHIEEDNRKGDKEPRKVEANVHIAEASRRHPKKNQVKTKNVNLGPRNDANKRIRAICWVCGNSGHIAANCRHKKGQSSNN
        +ENLTVK+ IEEDNRKGDKEPRKVEAN HIAEASRRHPKKNQ KTKNVNLGPRN+ANKRIRAI WVCG S HIAANCRHKKGQ+SNN
Subjt:  MENLTVKLHIEEDNRKGDKEPRKVEANVHIAEASRRHPKKNQVKTKNVNLGPRNDANKRIRAICWVCGNSGHIAANCRHKKGQSSNN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAATCTTACTGTGAAACTCCACATTGAAGAGGACAACAGAAAGGGAGACAAAGAGCCACGTAAAGTTGAAGCTAATGTCCATATTGCTGAAGCTTCAAGGCGTCA
TCCCAAGAAGAATCAAGTCAAGACAAAGAATGTGAATCTTGGGCCAAGGAATGACGCTAACAAGCGTATTCGTGCAATCTGTTGGGTTTGTGGCAATAGTGGCCATATAG
CTGCAAATTGTAGACACAAGAAGGGACAAAGCTCCAACAACTGTCATGAAAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAATCTTACTGTGAAACTCCACATTGAAGAGGACAACAGAAAGGGAGACAAAGAGCCACGTAAAGTTGAAGCTAATGTCCATATTGCTGAAGCTTCAAGGCGTCA
TCCCAAGAAGAATCAAGTCAAGACAAAGAATGTGAATCTTGGGCCAAGGAATGACGCTAACAAGCGTATTCGTGCAATCTGTTGGGTTTGTGGCAATAGTGGCCATATAG
CTGCAAATTGTAGACACAAGAAGGGACAAAGCTCCAACAACTGTCATGAAAACTGA
Protein sequenceShow/hide protein sequence
MENLTVKLHIEEDNRKGDKEPRKVEANVHIAEASRRHPKKNQVKTKNVNLGPRNDANKRIRAICWVCGNSGHIAANCRHKKGQSSNNCHEN