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Moc09g28800 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g28800
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr9:21575888..21577341
RNA-Seq ExpressionMoc09g28800
SyntenyMoc09g28800
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU49029.1 hypothetical protein TSUD_406820 [Trifolium subterraneum]8.2e-0436.08Show/hide
Query:  VEEWSKLKLTS------TKEEVLVDVDAGATYKLVG----TRDCDRVLKTDPWSFDKALLILQKPSRLIKSSLLEFKFVSFWTHFLDLTLEYMNEAM
        ++ W +L L+       T EE ++  D      LVG     RD + VLK  PWSFD+ LLIL++ S   + + LE   VSFW    +L L+   +AM
Subjt:  VEEWSKLKLTS------TKEEVLVDVDAGATYKLVG----TRDCDRVLKTDPWSFDKALLILQKPSRLIKSSLLEFKFVSFWTHFLDLTLEYMNEAM

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]6.0e-0728.67Show/hide
Query:  DLVEEWSKLKLTSTKEEVLVDVDAGA-----------------------------TYKLVGTRDC-----------------------DRVLKTDPWSFD
        +L+EEW   KLTS ++++ VD+D+ A                             T K+    DC                       +R+L+  PW+FD
Subjt:  DLVEEWSKLKLTSTKEEVLVDVDAGA-----------------------------TYKLVGTRDC-----------------------DRVLKTDPWSFD

Query:  KALLILQKPSRLIKSSLLEFKFVSFWTHFLDLTLEYMNEAMTT
        +AL+I+  P  L K   ++F+ VS W HF DL+L  MN+ M T
Subjt:  KALLILQKPSRLIKSSLLEFKFVSFWTHFLDLTLEYMNEAMTT

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]1.4e-0832.86Show/hide
Query:  DLVEEWSKLKLTSTKEEVLVDVDA--------GATYKLVG-----------------------------------------TRDCD--RVLKTDPWSFDK
        +L+ +W K KLTS ++E+ +DVD         G  Y LVG                                          R+CD  RV+KT PW FDK
Subjt:  DLVEEWSKLKLTSTKEEVLVDVDA--------GATYKLVG-----------------------------------------TRDCD--RVLKTDPWSFDK

Query:  ALLILQKPSRLIKSSLLEFKFVSFWTHFLDLTLEYMNEAM
        AL++LQKP      S LEF  V+FW H  DL + ++N+ M
Subjt:  ALLILQKPSRLIKSSLLEFKFVSFWTHFLDLTLEYMNEAM

TrEMBL top hitse value%identityAlignment
A0A2Z6PPZ2 CCHC-type domain-containing protein3.9e-0436.08Show/hide
Query:  VEEWSKLKLTS------TKEEVLVDVDAGATYKLVG----TRDCDRVLKTDPWSFDKALLILQKPSRLIKSSLLEFKFVSFWTHFLDLTLEYMNEAM
        ++ W +L L+       T EE ++  D      LVG     RD + VLK  PWSFD+ LLIL++ S   + + LE   VSFW    +L L+   +AM
Subjt:  VEEWSKLKLTS------TKEEVLVDVDAGATYKLVG----TRDCDRVLKTDPWSFDKALLILQKPSRLIKSSLLEFKFVSFWTHFLDLTLEYMNEAM

A0A6J1BSZ1 uncharacterized protein LOC1110054812.9e-0728.67Show/hide
Query:  DLVEEWSKLKLTSTKEEVLVDVDAGA-----------------------------TYKLVGTRDC-----------------------DRVLKTDPWSFD
        +L+EEW   KLTS ++++ VD+D+ A                             T K+    DC                       +R+L+  PW+FD
Subjt:  DLVEEWSKLKLTSTKEEVLVDVDAGA-----------------------------TYKLVGTRDC-----------------------DRVLKTDPWSFD

Query:  KALLILQKPSRLIKSSLLEFKFVSFWTHFLDLTLEYMNEAMTT
        +AL+I+  P  L K   ++F+ VS W HF DL+L  MN+ M T
Subjt:  KALLILQKPSRLIKSSLLEFKFVSFWTHFLDLTLEYMNEAMTT

A0A6J1DU55 uncharacterized protein LOC1110231357.0e-0932.86Show/hide
Query:  DLVEEWSKLKLTSTKEEVLVDVDA--------GATYKLVG-----------------------------------------TRDCD--RVLKTDPWSFDK
        +L+ +W K KLTS ++E+ +DVD         G  Y LVG                                          R+CD  RV+KT PW FDK
Subjt:  DLVEEWSKLKLTSTKEEVLVDVDA--------GATYKLVG-----------------------------------------TRDCD--RVLKTDPWSFDK

Query:  ALLILQKPSRLIKSSLLEFKFVSFWTHFLDLTLEYMNEAM
        AL++LQKP      S LEF  V+FW H  DL + ++N+ M
Subjt:  ALLILQKPSRLIKSSLLEFKFVSFWTHFLDLTLEYMNEAM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCTTGTGGAAGAGTGGAGCAAGCTCAAACTAACATCCACTAAAGAAGAGGTCTTAGTGGATGTGGATGCTGGGGCGACTTACAAATTGGTTGGCACAAGAGATTG
TGATAGAGTTCTCAAGACAGACCCATGGTCTTTTGATAAAGCTTTGCTGATTTTGCAGAAACCTTCGAGGTTGATAAAATCGTCACTCTTAGAGTTCAAGTTTGTGTCGT
TCTGGACCCATTTTCTTGATCTTACTTTGGAATATATGAACGAGGCAATGACAACTTGGAAGATGGTGTTGTCGGAAGATGTGAAGGAGACGGTGGCCACGACGAAGATG
ATGACTGGAGAGGAGAATGTCGGCAGGCGGCCGGGGAAGGAAGCAGTTACGGAAAGTACTAAGGTATGTGACATAAATGTGATTGATACTATTCCCTTCTACGGAAGAGA
TTTGGAAAAAGAATTTGCTCAATCTCAGAATCTGGTGGGATCTATAGAAGGGATGGAATCTTTTTCCAAGAAAATGAATGTGCCTAAAACAGTTCAGGCGAGGGATCGGG
AGAATACTACAGATGCTATTTATGGTGAATCCAAAGGAGAAATGATGGAGGTTTTTGTAGAGGAAGGTACTCATGTTGGGCCAATTATAGGGGGGCTTGGGATGTCTAAT
TTGAAGGGGCGGAAGCGGGAGGGGGATGGCATGGTAGAATATAATAATGCAAAGAAGACAAAACTACTTACAGATGAAAGGTTTGAGGCGAATATTATATTGGCAGAGAC
TCTAATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATCTTGTGGAAGAGTGGAGCAAGCTCAAACTAACATCCACTAAAGAAGAGGTCTTAGTGGATGTGGATGCTGGGGCGACTTACAAATTGGTTGGCACAAGAGATTG
TGATAGAGTTCTCAAGACAGACCCATGGTCTTTTGATAAAGCTTTGCTGATTTTGCAGAAACCTTCGAGGTTGATAAAATCGTCACTCTTAGAGTTCAAGTTTGTGTCGT
TCTGGACCCATTTTCTTGATCTTACTTTGGAATATATGAACGAGGCAATGACAACTTGGAAGATGGTGTTGTCGGAAGATGTGAAGGAGACGGTGGCCACGACGAAGATG
ATGACTGGAGAGGAGAATGTCGGCAGGCGGCCGGGGAAGGAAGCAGTTACGGAAAGTACTAAGGTATGTGACATAAATGTGATTGATACTATTCCCTTCTACGGAAGAGA
TTTGGAAAAAGAATTTGCTCAATCTCAGAATCTGGTGGGATCTATAGAAGGGATGGAATCTTTTTCCAAGAAAATGAATGTGCCTAAAACAGTTCAGGCGAGGGATCGGG
AGAATACTACAGATGCTATTTATGGTGAATCCAAAGGAGAAATGATGGAGGTTTTTGTAGAGGAAGGTACTCATGTTGGGCCAATTATAGGGGGGCTTGGGATGTCTAAT
TTGAAGGGGCGGAAGCGGGAGGGGGATGGCATGGTAGAATATAATAATGCAAAGAAGACAAAACTACTTACAGATGAAAGGTTTGAGGCGAATATTATATTGGCAGAGAC
TCTAATGTAG
Protein sequenceShow/hide protein sequence
MDLVEEWSKLKLTSTKEEVLVDVDAGATYKLVGTRDCDRVLKTDPWSFDKALLILQKPSRLIKSSLLEFKFVSFWTHFLDLTLEYMNEAMTTWKMVLSEDVKETVATTKM
MTGEENVGRRPGKEAVTESTKVCDINVIDTIPFYGRDLEKEFAQSQNLVGSIEGMESFSKKMNVPKTVQARDRENTTDAIYGESKGEMMEVFVEEGTHVGPIIGGLGMSN
LKGRKREGDGMVEYNNAKKTKLLTDERFEANIILAETLM