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Moc09g29010 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g29010
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr9:21771254..21771529
RNA-Seq ExpressionMoc09g29010
SyntenyMoc09g29010
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142768.1 uncharacterized protein LOC111012806 [Momordica charantia]1.5e-2983.15Show/hide
Query:  MCYFLTGLADETLTIKLVEEAPATFAEMLQKAKKVIDGQELLRTKTGRPEKQVDQKKLRQERRRTDVKSKDKGPSSSSGRTEYRRSEDG
        MCYFLTGLADETLT+KL EEAPATF E+LQKAKKVIDGQELLRTKTGRPEKQ+DQKKL QE+R+ D KSKDKG SSS  RTEYRR E G
Subjt:  MCYFLTGLADETLTIKLVEEAPATFAEMLQKAKKVIDGQELLRTKTGRPEKQVDQKKLRQERRRTDVKSKDKGPSSSSGRTEYRRSEDG

XP_022151292.1 uncharacterized protein LOC111019256 [Momordica charantia]4.4e-2983.15Show/hide
Query:  MCYFLTGLADETLTIKLVEEAPATFAEMLQKAKKVIDGQELLRTKTGRPEKQVDQKKLRQERRRTDVKSKDKGPSSSSGRTEYRRSEDG
        MCYFLTGLADETLT+KL EEAPATF E+LQKAKKVIDGQEL RTKTGRPEKQ+DQKKL QE RR DVKSKDKG SSS  R EYRRS+ G
Subjt:  MCYFLTGLADETLTIKLVEEAPATFAEMLQKAKKVIDGQELLRTKTGRPEKQVDQKKLRQERRRTDVKSKDKGPSSSSGRTEYRRSEDG

XP_022153957.1 uncharacterized protein LOC111021344 [Momordica charantia]1.2e-2983.15Show/hide
Query:  MCYFLTGLADETLTIKLVEEAPATFAEMLQKAKKVIDGQELLRTKTGRPEKQVDQKKLRQERRRTDVKSKDKGPSSSSGRTEYRRSEDG
        MCYFLTGLADETLT+KL EEAPATFAE+L+KAKKVIDGQELLRTKTGRPE+Q+DQKKL QE+R+ D KSKDKG SSS  RTEYRRSE G
Subjt:  MCYFLTGLADETLTIKLVEEAPATFAEMLQKAKKVIDGQELLRTKTGRPEKQVDQKKLRQERRRTDVKSKDKGPSSSSGRTEYRRSEDG

XP_022154405.1 uncharacterized protein LOC111021682 [Momordica charantia]5.7e-2980.9Show/hide
Query:  MCYFLTGLADETLTIKLVEEAPATFAEMLQKAKKVIDGQELLRTKTGRPEKQVDQKKLRQERRRTDVKSKDKGPSSSSGRTEYRRSEDG
        MCYFLTGLADETLT+KL EEAPATFAE+LQKAKKVIDGQEL+RTKTGRPEKQ+DQ+K  QE+R+ D KSKDKGPSSSS R +YRRS+ G
Subjt:  MCYFLTGLADETLTIKLVEEAPATFAEMLQKAKKVIDGQELLRTKTGRPEKQVDQKKLRQERRRTDVKSKDKGPSSSSGRTEYRRSEDG

XP_022158303.1 uncharacterized protein LOC111024817 [Momordica charantia]1.2e-2988.24Show/hide
Query:  MCYFLTGLADETLTIKLVEEAPATFAEMLQKAKKVIDGQELLRTKTGRPEKQVDQKKLRQERRRTDVKSKDKGPSSSSGRTEYRR
        MCYFLTGLADETLTIKL EEAPATFAE+LQKAKKVIDGQELLRTKT RPEKQ+DQKKL QE+RRTDV+SKDK PSSSS R EYRR
Subjt:  MCYFLTGLADETLTIKLVEEAPATFAEMLQKAKKVIDGQELLRTKTGRPEKQVDQKKLRQERRRTDVKSKDKGPSSSSGRTEYRR

TrEMBL top hitse value%identityAlignment
A0A6J1CP40 uncharacterized protein LOC1110128067.3e-3083.15Show/hide
Query:  MCYFLTGLADETLTIKLVEEAPATFAEMLQKAKKVIDGQELLRTKTGRPEKQVDQKKLRQERRRTDVKSKDKGPSSSSGRTEYRRSEDG
        MCYFLTGLADETLT+KL EEAPATF E+LQKAKKVIDGQELLRTKTGRPEKQ+DQKKL QE+R+ D KSKDKG SSS  RTEYRR E G
Subjt:  MCYFLTGLADETLTIKLVEEAPATFAEMLQKAKKVIDGQELLRTKTGRPEKQVDQKKLRQERRRTDVKSKDKGPSSSSGRTEYRRSEDG

A0A6J1DD31 uncharacterized protein LOC1110192562.1e-2983.15Show/hide
Query:  MCYFLTGLADETLTIKLVEEAPATFAEMLQKAKKVIDGQELLRTKTGRPEKQVDQKKLRQERRRTDVKSKDKGPSSSSGRTEYRRSEDG
        MCYFLTGLADETLT+KL EEAPATF E+LQKAKKVIDGQEL RTKTGRPEKQ+DQKKL QE RR DVKSKDKG SSS  R EYRRS+ G
Subjt:  MCYFLTGLADETLTIKLVEEAPATFAEMLQKAKKVIDGQELLRTKTGRPEKQVDQKKLRQERRRTDVKSKDKGPSSSSGRTEYRRSEDG

A0A6J1DJI4 uncharacterized protein LOC1110216822.8e-2980.9Show/hide
Query:  MCYFLTGLADETLTIKLVEEAPATFAEMLQKAKKVIDGQELLRTKTGRPEKQVDQKKLRQERRRTDVKSKDKGPSSSSGRTEYRRSEDG
        MCYFLTGLADETLT+KL EEAPATFAE+LQKAKKVIDGQEL+RTKTGRPEKQ+DQ+K  QE+R+ D KSKDKGPSSSS R +YRRS+ G
Subjt:  MCYFLTGLADETLTIKLVEEAPATFAEMLQKAKKVIDGQELLRTKTGRPEKQVDQKKLRQERRRTDVKSKDKGPSSSSGRTEYRRSEDG

A0A6J1DKD3 uncharacterized protein LOC1110213445.6e-3083.15Show/hide
Query:  MCYFLTGLADETLTIKLVEEAPATFAEMLQKAKKVIDGQELLRTKTGRPEKQVDQKKLRQERRRTDVKSKDKGPSSSSGRTEYRRSEDG
        MCYFLTGLADETLT+KL EEAPATFAE+L+KAKKVIDGQELLRTKTGRPE+Q+DQKKL QE+R+ D KSKDKG SSS  RTEYRRSE G
Subjt:  MCYFLTGLADETLTIKLVEEAPATFAEMLQKAKKVIDGQELLRTKTGRPEKQVDQKKLRQERRRTDVKSKDKGPSSSSGRTEYRRSEDG

A0A6J1DVQ3 uncharacterized protein LOC1110248175.6e-3088.24Show/hide
Query:  MCYFLTGLADETLTIKLVEEAPATFAEMLQKAKKVIDGQELLRTKTGRPEKQVDQKKLRQERRRTDVKSKDKGPSSSSGRTEYRR
        MCYFLTGLADETLTIKL EEAPATFAE+LQKAKKVIDGQELLRTKT RPEKQ+DQKKL QE+RRTDV+SKDK PSSSS R EYRR
Subjt:  MCYFLTGLADETLTIKLVEEAPATFAEMLQKAKKVIDGQELLRTKTGRPEKQVDQKKLRQERRRTDVKSKDKGPSSSSGRTEYRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCTACTTCCTCACCGGCCTGGCCGATGAGACCTTAACCATAAAACTTGTAGAGGAAGCTCCAGCCACCTTCGCCGAAATGTTACAGAAGGCGAAGAAAGTCATTGA
TGGGCAGGAGCTCCTCCGAACCAAGACTGGCCGACCTGAAAAGCAGGTCGATCAGAAGAAACTTAGGCAGGAGAGGAGGAGGACCGATGTCAAGTCCAAAGATAAGGGAC
CATCCTCCTCCAGTGGCAGAACAGAGTACCGAAGGTCGGAGGACGGCTCCATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGCTACTTCCTCACCGGCCTGGCCGATGAGACCTTAACCATAAAACTTGTAGAGGAAGCTCCAGCCACCTTCGCCGAAATGTTACAGAAGGCGAAGAAAGTCATTGA
TGGGCAGGAGCTCCTCCGAACCAAGACTGGCCGACCTGAAAAGCAGGTCGATCAGAAGAAACTTAGGCAGGAGAGGAGGAGGACCGATGTCAAGTCCAAAGATAAGGGAC
CATCCTCCTCCAGTGGCAGAACAGAGTACCGAAGGTCGGAGGACGGCTCCATCTAG
Protein sequenceShow/hide protein sequence
MCYFLTGLADETLTIKLVEEAPATFAEMLQKAKKVIDGQELLRTKTGRPEKQVDQKKLRQERRRTDVKSKDKGPSSSSGRTEYRRSEDGSI