CuGenDBv2

Gene ID	Moc09g29030
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	CCHC-type domain-containing protein
Genome location	chr9:21775400..21777137
RNA-Seq Expression	Moc09g29030
Synteny	Moc09g29030
Gene Ontology terms	GO:0003824 - catalytic activity (molecular function) GO:0097159 - organic cyclic compound binding (molecular function) GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7561662.1 Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa]

1.1e-36

42.13

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Query:  GVLKFNGENFSFWKMQVNDLLTCKKIHKTLRERPAGMVDKDWNEMDEQAVANIRMALLMNVCSLVAKETTTKDLLKALQDRYQKSSVNTKILLWTRYFNI
        G+ KF+G +F+FW+MQ+ D L  KK+H+ L  +P  M  ++W+ +D Q +  IR+ L  NV   VAKE TT+ L+K L D Y+K S N K+ L  + F++
Subjt:  GVLKFNGENFSFWKMQVNDLLTCKKIHKTLRERPAGMVDKDWNEMDEQAVANIRMALLMNVCSLVAKETTTKDLLKALQDRYQKSSVNTKILLWTRYFNI

Query:  HMEEGTSVNSHINELTDILNKLERMGVKIDEKVKAMRLLTSLPDSWETMKTAVPNSLGENSLKFTAICDAALSEEARR-KLGKMSASTP-GAENEG-ESA
         MEEG  V +H+NE   I+N+L  + ++ D++V+A+ L+ SLP+SWE M+ AV NS+G   LKF  + D  L EE RR   G+ S S+    EN G +  
Subjt:  HMEEGTSVNSHINELTDILNKLERMGVKIDEKVKAMRLLTSLPDSWETMKTAVPNSLGENSLKFTAICDAALSEEARR-KLGKMSASTP-GAENEG-ESA

Query:  LVAQNKGKTNMSYNGK
           QN+G++  S NGK
Subjt:  LVAQNKGKTNMSYNGK

KAG7584790.1 Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa]

8.6e-37

42.59

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Query:  GVLKFNGENFSFWKMQVNDLLTCKKIHKTLRERPAGMVDKDWNEMDEQAVANIRMALLMNVCSLVAKETTTKDLLKALQDRYQKSSVNTKILLWTRYFNI
        G+ KF+G +F+FW+MQ+ D L  KK+H+ L  +P  M  ++W+ +D Q +  IR+ L  NV   VAKE TT+ L+K L D Y+K S N K+ L  + F++
Subjt:  GVLKFNGENFSFWKMQVNDLLTCKKIHKTLRERPAGMVDKDWNEMDEQAVANIRMALLMNVCSLVAKETTTKDLLKALQDRYQKSSVNTKILLWTRYFNI

Query:  HMEEGTSVNSHINELTDILNKLERMGVKIDEKVKAMRLLTSLPDSWETMKTAVPNSLGENSLKFTAICDAALSEEARR-KLGKMSASTP-GAENEG-ESA
         MEEG  V +H+NE   I+N+L  + ++ D++V+A+ LL SLP+SWE M+ AV NS+G   LKF  + D  L EE RR   G+ S S+    EN G +  
Subjt:  HMEEGTSVNSHINELTDILNKLERMGVKIDEKVKAMRLLTSLPDSWETMKTAVPNSLGENSLKFTAICDAALSEEARR-KLGKMSASTP-GAENEG-ESA

Query:  LVAQNKGKTNMSYNGK
           QN+G++  S NGK
Subjt:  LVAQNKGKTNMSYNGK

KAG7593230.1 Pentatricopeptide repeat [Arabidopsis thaliana x Arabidopsis arenosa]

8.6e-37

38.62

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Query:  GVLKFNGENFSFWKMQVNDLLTCKKIHKTLRERPAGMVDKDWNEMDEQAVANIRMALLMNVCSLVAKETTTKDLLKALQDRYQKSSVNTKILLWTRYFNI
        G+ KF+G +F+FW+MQ+ D L  KK+H+ L  +P  M  ++W+ +D Q +  IR+ L  NV   VAKE TT+ L+K L D Y+K S N K+ L  + F++
Subjt:  GVLKFNGENFSFWKMQVNDLLTCKKIHKTLRERPAGMVDKDWNEMDEQAVANIRMALLMNVCSLVAKETTTKDLLKALQDRYQKSSVNTKILLWTRYFNI

Query:  HMEEGTSVNSHINELTDILNKLERMGVKIDEKVKAMRLLTSLPDSWETMKTAVPNSLGENSLKFTAICDAALSEEARR-KLGKMSASTP-GAENEG-ESA
         MEEG  V +H+NE   I+N+L  + ++ D++V+A+ LL SLP+SWE M+ AV NS+G   LKF  + D  L EE RR   G+ S S+    EN G +  
Subjt:  HMEEGTSVNSHINELTDILNKLERMGVKIDEKVKAMRLLTSLPDSWETMKTAVPNSLGENSLKFTAICDAALSEEARR-KLGKMSASTP-GAENEG-ESA

Query:  LVAQNKGKTNMSYNGKQHG------GCWKVKRESRVVATSHKRSSV
           QN+G++  S NGK          CW   +       +  ++S+
Subjt:  LVAQNKGKTNMSYNGKQHG------GCWKVKRESRVVATSHKRSSV

XP_022152155.1 cinnamoyl-CoA reductase-like SNL6 [Momordica charantia]

5.2e-42

77.95

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Query:  VVATSHKRSSVYVSEFGVAKGSLRQTMHIVAADGSGRDLRGPVTLMAKTDQKNLPSAQVKQLRSTEKGNQNLIGHRVHTSVVRRSGELMKSHRQISALKG
        VVAT HKRS VYVSEF VAKGSLRQTMH V A GS R LR P  LMAKTDQKNLPS QVKQLRST+KGN+NLIGHRVHTS VR  GEL+KSHR+ISALKG
Subjt:  VVATSHKRSSVYVSEFGVAKGSLRQTMHIVAADGSGRDLRGPVTLMAKTDQKNLPSAQVKQLRSTEKGNQNLIGHRVHTSVVRRSGELMKSHRQISALKG

Query:  TGYVPSVVTDLSRSAKSSGKSSFRGRW
        TG + SV T LS SAKSSG+SSFR  W
Subjt:  TGYVPSVVTDLSRSAKSSGKSSFRGRW

XP_022157059.1 uncharacterized protein LOC111023870 [Momordica charantia]

4.9e-40

82.24

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Query:  GSLRQTMHIVAADGSGRDLRGPVTLMAKTDQKNLPSAQVKQLRSTEKGNQNLIGHRVHTSVVRRSGELMKSHRQISALKGTGYVPSVVTDLSRSAKSSGK
        GSLRQTMH VA D SGRDL+GP TLMA+TDQKNLPSA VKQLRSTEKGN+NLIGH+VHTS VRRSGEL+KSHR+ISA KGTG+V SVVTDL  SAKSSG+
Subjt:  GSLRQTMHIVAADGSGRDLRGPVTLMAKTDQKNLPSAQVKQLRSTEKGNQNLIGHRVHTSVVRRSGELMKSHRQISALKGTGYVPSVVTDLSRSAKSSGK

Query:  SSFRGRW
        SSF+GRW
Subjt:  SSFRGRW

TrEMBL top hits

e value

%identity

Alignment

A0A4Y1R0B6 Disease resistance family protein / LRR family protein

1.0e-35

39.15

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Query:  KFNGENFSFWKMQVNDLLTCKKIHKTLRE-RPAGMVDKDWNEMDEQAVANIRMALLMNVCSLVAKETTTKDLLKALQDRYQKSSVNTKILLWTRYFNIHM
        KF+G +F FWKMQ+ D L  KK+++ L E +P GM D+DW  +D QA+  IR+ L  NV   +AKE TT  L+ AL   Y+K S + K+ L  R FN+ M
Subjt:  KFNGENFSFWKMQVNDLLTCKKIHKTLRE-RPAGMVDKDWNEMDEQAVANIRMALLMNVCSLVAKETTTKDLLKALQDRYQKSSVNTKILLWTRYFNIHM

Query:  EEGTSVNSHINELTDILNKLERMGVKIDEKVKAMRLLTSLPDSWETMKTAVPNSLGENSLKFTAICDAALSEEARRKLGKMSASTPGAENEGESALVAQN
         EG SV  H+NEL  +  +L  +G++ DE+V+A+ LL+SLP+SW    TAV +S G N L F  + D  LSEE RR+    S+++     E       + 
Subjt:  EEGTSVNSHINELTDILNKLERMGVKIDEKVKAMRLLTSLPDSWETMKTAVPNSLGENSLKFTAICDAALSEEARRKLGKMSASTPGAENEGESALVAQN

Query:  KGKTNMSYNGKQHGGCWKVKRESRVVATSHKRSSV
         G+   +Y G+        + +SR    SH   +V
Subjt:  KGKTNMSYNGKQHGGCWKVKRESRVVATSHKRSSV

A0A4Y1RCM7 CCHC-type domain-containing protein

1.0e-35

39.15

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Query:  KFNGENFSFWKMQVNDLLTCKKIHKTLRE-RPAGMVDKDWNEMDEQAVANIRMALLMNVCSLVAKETTTKDLLKALQDRYQKSSVNTKILLWTRYFNIHM
        KF+G +F FWKMQ+ D L  KK+++ L E +P GM D+DW  +D QA+  IR+ L  NV   +AKE TT  L+ AL   Y+K S + K+ L  R FN+ M
Subjt:  KFNGENFSFWKMQVNDLLTCKKIHKTLRE-RPAGMVDKDWNEMDEQAVANIRMALLMNVCSLVAKETTTKDLLKALQDRYQKSSVNTKILLWTRYFNIHM

Query:  EEGTSVNSHINELTDILNKLERMGVKIDEKVKAMRLLTSLPDSWETMKTAVPNSLGENSLKFTAICDAALSEEARRKLGKMSASTPGAENEGESALVAQN
         EG SV  H+NEL  +  +L  +G++ DE+V+A+ LL+SLP+SW    TAV +S G N L F  + D  LSEE RR+    S+++     E       + 
Subjt:  EEGTSVNSHINELTDILNKLERMGVKIDEKVKAMRLLTSLPDSWETMKTAVPNSLGENSLKFTAICDAALSEEARRKLGKMSASTPGAENEGESALVAQN

Query:  KGKTNMSYNGKQHGGCWKVKRESRVVATSHKRSSV
         G+   +Y G+        + +SR    SH   +V
Subjt:  KGKTNMSYNGKQHGGCWKVKRESRVVATSHKRSSV

A0A6J1DD48 cinnamoyl-CoA reductase-like SNL6

2.5e-42

77.95

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Query:  VVATSHKRSSVYVSEFGVAKGSLRQTMHIVAADGSGRDLRGPVTLMAKTDQKNLPSAQVKQLRSTEKGNQNLIGHRVHTSVVRRSGELMKSHRQISALKG
        VVAT HKRS VYVSEF VAKGSLRQTMH V A GS R LR P  LMAKTDQKNLPS QVKQLRST+KGN+NLIGHRVHTS VR  GEL+KSHR+ISALKG
Subjt:  VVATSHKRSSVYVSEFGVAKGSLRQTMHIVAADGSGRDLRGPVTLMAKTDQKNLPSAQVKQLRSTEKGNQNLIGHRVHTSVVRRSGELMKSHRQISALKG

Query:  TGYVPSVVTDLSRSAKSSGKSSFRGRW
        TG + SV T LS SAKSSG+SSFR  W
Subjt:  TGYVPSVVTDLSRSAKSSGKSSFRGRW

A0A6J1DVE9 uncharacterized protein LOC111023870

2.4e-40

82.24

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Query:  GSLRQTMHIVAADGSGRDLRGPVTLMAKTDQKNLPSAQVKQLRSTEKGNQNLIGHRVHTSVVRRSGELMKSHRQISALKGTGYVPSVVTDLSRSAKSSGK
        GSLRQTMH VA D SGRDL+GP TLMA+TDQKNLPSA VKQLRSTEKGN+NLIGH+VHTS VRRSGEL+KSHR+ISA KGTG+V SVVTDL  SAKSSG+
Subjt:  GSLRQTMHIVAADGSGRDLRGPVTLMAKTDQKNLPSAQVKQLRSTEKGNQNLIGHRVHTSVVRRSGELMKSHRQISALKGTGYVPSVVTDLSRSAKSSGK

Query:  SSFRGRW
        SSF+GRW
Subjt:  SSFRGRW

A0A803MU96 Uncharacterized protein

6.0e-36

42.72

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Query:  KFNGENFSFWKMQVNDLLTCKKIHKTLRE-RPAGMVDKDWNEMDEQAVANIRMALLMNVCSLVAKETTTKDLLKALQDRYQKSSVNTKILLWTRYFNIHM
        KF+G++F FWKMQ+ D L  KK+++ L E +P GM + +W  +D QA+  IR+ L  NV   +AKETTT  L+KAL + Y+K S + K+ L  R F++ M
Subjt:  KFNGENFSFWKMQVNDLLTCKKIHKTLRE-RPAGMVDKDWNEMDEQAVANIRMALLMNVCSLVAKETTTKDLLKALQDRYQKSSVNTKILLWTRYFNIHM

Query:  EEGTSVNSHINELTDILNKLERMGVKIDEKVKAMRLLTSLPDSWETMKTAVPNSLGENSLKFTAICDAALSEEARRKLG--KMSASTPGAENEGESALVA
         EG SV  H+NEL  +  +L  + +K D+KV A+ LL+SLPDSW    TAV +S G N LKF  + D  LSEE RR+      S+S    E+ G + +  
Subjt:  EEGTSVNSHINELTDILNKLERMGVKIDEKVKAMRLLTSLPDSWETMKTAVPNSLGENSLKFTAICDAALSEEARRKLG--KMSASTPGAENEGESALVA

Query:  QNKGKTNMSYNGK
          +G++N  Y G+
Subjt:  QNKGKTNMSYNGK

SwissProt top hits

e value

%identity

Alignment

P04146 Copia protein

3.2e-10

Show/hide

Query:  FNGENFSFWKMQVNDLLTCKKIHKTLRERPAGMVDKDWNEMDEQAVANIRMALLMNVCSLVAKETTTKDLLKALQDRYQKSSVNTKILLWTRYFNIHMEE
        F+GE ++ WK ++  LL  + + K +       VD  W + +  A + I   L  +  +    + T + +L+ L   Y++ S+ +++ L  R  ++ +  
Subjt:  FNGENFSFWKMQVNDLLTCKKIHKTLRERPAGMVDKDWNEMDEQAVANIRMALLMNVCSLVAKETTTKDLLKALQDRYQKSSVNTKILLWTRYFNIHMEE

Query:  GTSVNSHINELTDILNKLERMGVKIDEKVKAMRLLTSLPDSWETMKTAVPNSLGENSLKFTAICDAALSEEARRK
          S+ SH +   +++++L   G KI+E  K   LL +LP  ++ + TA+  +L E +L    + +  L +E + K
Subjt:  GTSVNSHINELTDILNKLERMGVKIDEKVKAMRLLTSLPDSWETMKTAVPNSLGENSLKFTAICDAALSEEARRK

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94

5.6e-23

31.6

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Query:  VLKFNGEN-FSFWKMQVNDLLTCKKIHKTL---RERPAGMVDKDWNEMDEQAVANIRMALLMNVCSLVAKETTTKDLLKALQDRYQKSSVNTKILLWTRY
        V KFNG+N FS W+ ++ DLL  + +HK L    ++P  M  +DW ++DE+A + IR+ L  +V + +  E T + +   L+  Y   ++  K+ L  + 
Subjt:  VLKFNGEN-FSFWKMQVNDLLTCKKIHKTL---RERPAGMVDKDWNEMDEQAVANIRMALLMNVCSLVAKETTTKDLLKALQDRYQKSSVNTKILLWTRY

Query:  FNIHMEEGTSVNSHINELTDILNKLERMGVKIDEKVKAMRLLTSLPDSWETMKTAVPNSLGENSLKFTAICDAALSEEARRKLGKMSASTPGAENEGESA
        + +HM EGT+  SH+N    ++ +L  +GVKI+E+ KA+ LL SLP S++ + T + +  G+ +++   +  A L  E  RK           EN+G+ A
Subjt:  FNIHMEEGTSVNSHINELTDILNKLERMGVKIDEKVKAMRLLTSLPDSWETMKTAVPNSLGENSLKFTAICDAALSEEARRKLGKMSASTPGAENEGESA

Query:  LVAQNKGKT--NMSYNGKQHGGCWKVKRESR
        L+ + +G++    S N  + G   K K  S+
Subjt:  LVAQNKGKT--NMSYNGKQHGGCWKVKRESR

Arabidopsis top hits

e value

%identity

Alignment

AT3G29785.1 unknown protein

7.3e-10

34.83

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Query:  KFNGENFSFWKMQVNDLLTCKKIHKTLRERPAGMVDKDWNEMDEQAVANIRMALLMNVCSLVAKETTTKDLLKALQDRYQKSSVNTKIL
        K +G ++SF +M++ D L  KK+H+ L ++   M   DWN +  Q +  IR+ +  N+   VAKE +   L+K L D Y+K S N  ++
Subjt:  KFNGENFSFWKMQVNDLLTCKKIHKTLRERPAGMVDKDWNEMDEQAVANIRMALLMNVCSLVAKETTTKDLLKALQDRYQKSSVNTKIL

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGTGACAGATATCAAGCACACCATTATTATGAAGGAGTCCTGAAGTTCAATGGGGAGAATTTCAGTTTTTGGAAGATGCAGGTAAATGATCTTCTTACGTGCAAGAA
GATACACAAGACTTTAAGGGAGAGACCAGCAGGGATGGTAGACAAGGATTGGAATGAGATGGATGAACAGGCCGTTGCGAACATCCGAATGGCGTTATTAATGAATGTTT
GTAGTCTGGTGGCGAAAGAGACTACAACGAAAGATTTGTTGAAGGCCTTGCAAGACAGGTATCAAAAATCTTCTGTCAATACAAAAATACTTCTATGGACGAGGTATTTT
AATATCCACATGGAGGAGGGAACCTCGGTGAATTCCCACATTAATGAACTCACCGATATCTTGAACAAGTTAGAAAGGATGGGTGTCAAGATTGACGAGAAAGTGAAAGC
TATGAGGTTGTTGACGTCTTTGCCTGACAGTTGGGAGACTATGAAGACCGCAGTGCCAAATTCGCTAGGGGAAAATAGCTTGAAATTTACAGCTATTTGTGATGCCGCCT
TATCTGAGGAAGCCCGGAGAAAATTGGGGAAAATGTCTGCATCTACTCCAGGGGCAGAAAATGAGGGTGAATCAGCTTTGGTAGCTCAGAACAAAGGGAAGACAAATATG
AGTTACAATGGGAAGCAGCATGGGGGTTGCTGGAAGGTCAAGAGGGAATCCAGGGTGGTGGCAACAAGCCACAAGAGATCTTCTGTTTATGTGTCAGAATTTGGGGTTGC
CAAAGGTTCACTGAGACAGACTATGCACATAGTAGCTGCAGATGGTTCAGGGCGAGACCTTAGAGGACCAGTAACATTGATGGCTAAAACAGATCAGAAGAACCTGCCAT
CAGCTCAAGTAAAACAGTTGAGAAGTACAGAAAAGGGAAACCAAAATTTGATAGGCCATCGAGTTCATACCTCAGTTGTCAGACGTTCAGGCGAGCTGATGAAGTCGCAT
AGGCAAATTAGTGCATTGAAGGGTACAGGTTATGTTCCTAGTGTGGTGACAGACTTGAGTAGGAGTGCCAAGTCATCAGGGAAATCTTCCTTCAGAGGTCGTTGGGACCA
CGTAGAGCTGCCCAGTCTCGGGGCAGAGTCAGACGATGCTTGGGTAGGGCCAAACAGTATTGATCAGTTTATTGATGGAGGAGTCAGAACTGTGCCTTGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MGDRYQAHHYYEGVLKFNGENFSFWKMQVNDLLTCKKIHKTLRERPAGMVDKDWNEMDEQAVANIRMALLMNVCSLVAKETTTKDLLKALQDRYQKSSVNTKILLWTRYF
NIHMEEGTSVNSHINELTDILNKLERMGVKIDEKVKAMRLLTSLPDSWETMKTAVPNSLGENSLKFTAICDAALSEEARRKLGKMSASTPGAENEGESALVAQNKGKTNM
SYNGKQHGGCWKVKRESRVVATSHKRSSVYVSEFGVAKGSLRQTMHIVAADGSGRDLRGPVTLMAKTDQKNLPSAQVKQLRSTEKGNQNLIGHRVHTSVVRRSGELMKSH
RQISALKGTGYVPSVVTDLSRSAKSSGKSSFRGRWDHVELPSLGAESDDAWVGPNSIDQFIDGGVRTVP

Moc09g29030 (gene) of Bitter gourd (OHB3-1) v2 genome