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Moc09g29210 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g29210
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr9:21967359..21972045
RNA-Seq ExpressionMoc09g29210
SyntenyMoc09g29210
Gene Ontology termsGO:0005488 - binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7593230.1 Pentatricopeptide repeat [Arabidopsis thaliana x Arabidopsis arenosa]3.2e-2445.27Show/hide
Query:  MDEQAVANIRMTLSMGVCSLVSKETSAKELLKALQDRYEKPSANTKIFLWTKYFNIHIDEGTSVNSHINELTDILNKLEGMSVKIEEEVKAMRLLTSLPD
        +D Q +  IR+TLS  V   V+KE + + L+K L D YEKPSAN K+FL  K F++ ++EG  V +H+NE   I+N+L  + ++ ++EV+A+ LL SLP+
Subjt:  MDEQAVANIRMTLSMGVCSLVSKETSAKELLKALQDRYEKPSANTKIFLWTKYFNIHIDEGTSVNSHINELTDILNKLEGMSVKIEEEVKAMRLLTSLPD

Query:  SWEMMKTVVSNSLGENSLKFSAICDVTLSEEARRKLGKMYESTSGAEN
        SWE M+  VSNS+G   LKF  + D  L EE RR +     STS A N
Subjt:  SWEMMKTVVSNSLGENSLKFSAICDVTLSEEARRKLGKMYESTSGAEN

TKS02399.1 hypothetical protein D5086_0000163470 [Populus alba]3.2e-2441.36Show/hide
Query:  GGKTSGYDRQSLEEMDEQAVANIRMTLSMGVCSLVSKETSAKELLKALQDRYEKPSANTKIFLWTKYFNIHIDEGTSVNSHINELTDILNKLEGMSVKIE
        G K    + +  + +D Q +  IR++LS  V   V+KE S  +L++AL   YEKPSAN K+ L  K FN+ + E TSV  H+N    I N+L  + ++ +
Subjt:  GGKTSGYDRQSLEEMDEQAVANIRMTLSMGVCSLVSKETSAKELLKALQDRYEKPSANTKIFLWTKYFNIHIDEGTSVNSHINELTDILNKLEGMSVKIE

Query:  EEVKAMRLLTSLPDSWEMMKTVVSNSLGENSLKFSAICDVTLSEEARRKLGKMYESTSGAEN
        +E++A+ LL SLP SWE M+T VSNS G++ LK+  I D+ L+EE RRK      S+  A N
Subjt:  EEVKAMRLLTSLPDSWEMMKTVVSNSLGENSLKFSAICDVTLSEEARRKLGKMYESTSGAEN

TKS02608.1 hypothetical protein D5086_0000161380 [Populus alba]3.2e-2441.36Show/hide
Query:  GGKTSGYDRQSLEEMDEQAVANIRMTLSMGVCSLVSKETSAKELLKALQDRYEKPSANTKIFLWTKYFNIHIDEGTSVNSHINELTDILNKLEGMSVKIE
        G K    + +  + +D Q +  IR++LS  V   V+KE S  +L++AL   YEKPSAN K+ L  K FN+ + E TSV  H+N    I N+L  + ++ +
Subjt:  GGKTSGYDRQSLEEMDEQAVANIRMTLSMGVCSLVSKETSAKELLKALQDRYEKPSANTKIFLWTKYFNIHIDEGTSVNSHINELTDILNKLEGMSVKIE

Query:  EEVKAMRLLTSLPDSWEMMKTVVSNSLGENSLKFSAICDVTLSEEARRKLGKMYESTSGAEN
        +E++A+ LL SLP SWE M+T VSNS G++ LK+  I D+ L+EE RRK      S+  A N
Subjt:  EEVKAMRLLTSLPDSWEMMKTVVSNSLGENSLKFSAICDVTLSEEARRKLGKMYESTSGAEN

TKS13843.1 hypothetical protein D5086_0000049350 [Populus alba]3.2e-2441.36Show/hide
Query:  GGKTSGYDRQSLEEMDEQAVANIRMTLSMGVCSLVSKETSAKELLKALQDRYEKPSANTKIFLWTKYFNIHIDEGTSVNSHINELTDILNKLEGMSVKIE
        G K    + +  + +D Q +  IR++LS  V   V+KE S  +L++AL   YEKPSAN K+ L  K FN+ + E TSV  H+N    I N+L  + ++ +
Subjt:  GGKTSGYDRQSLEEMDEQAVANIRMTLSMGVCSLVSKETSAKELLKALQDRYEKPSANTKIFLWTKYFNIHIDEGTSVNSHINELTDILNKLEGMSVKIE

Query:  EEVKAMRLLTSLPDSWEMMKTVVSNSLGENSLKFSAICDVTLSEEARRKLGKMYESTSGAEN
        +E++A+ LL SLP SWE M+T VSNS G++ LK+  I D+ L+EE RRK      S+  A N
Subjt:  EEVKAMRLLTSLPDSWEMMKTVVSNSLGENSLKFSAICDVTLSEEARRKLGKMYESTSGAEN

VDD56318.1 unnamed protein product [Brassica oleracea]9.8e-2642.69Show/hide
Query:  YVQEDTQDFGGKTSGYDRQSLEEMDEQAVANIRMTLSMGVCSLVSKETSAKELLKALQDRYEKPSANTKIFLWTKYFNIHIDEGTSVNSHINELTDILNK
        YV++  Q    K    D+   E +D Q +  IR+TLS  V   V+KE + + L+K L D YEKPSAN K+FL  K F++ ++EG  V +H+NE   I+N+
Subjt:  YVQEDTQDFGGKTSGYDRQSLEEMDEQAVANIRMTLSMGVCSLVSKETSAKELLKALQDRYEKPSANTKIFLWTKYFNIHIDEGTSVNSHINELTDILNK

Query:  LEGMSVKIEEEVKAMRLLTSLPDSWEMMKTVVSNSLGENSLKFSAICDVTLSEEARRKLGKMYESTSGAEN
        L  + ++ E+EV+A+ LL SLP+SWE M+  VSN +G   LKF+ + D  L+EE RR +     STS A N
Subjt:  LEGMSVKIEEEVKAMRLLTSLPDSWEMMKTVVSNSLGENSLKFSAICDVTLSEEARRKLGKMYESTSGAEN

TrEMBL top hitse value%identityAlignment
A0A0D3AEM1 CCHC-type domain-containing protein2.8e-2644.24Show/hide
Query:  QDFGGKTSGYDRQSLEEMDEQAVANIRMTLSMGVCSLVSKETSAKELLKALQDRYEKPSANTKIFLWTKYFNIHIDEGTSVNSHINELTDILNKLEGMSV
        Q    K    D+   E +D Q +  IR+TLS  V   V KE + + L+K L D YEKPSAN+K+FL  K F++ ++EG  V +HINE   I+N+L  + +
Subjt:  QDFGGKTSGYDRQSLEEMDEQAVANIRMTLSMGVCSLVSKETSAKELLKALQDRYEKPSANTKIFLWTKYFNIHIDEGTSVNSHINELTDILNKLEGMSV

Query:  KIEEEVKAMRLLTSLPDSWEMMKTVVSNSLGENSLKFSAICDVTLSEEARRKLGKMYESTSGAEN
        + E+EV+A+ LL SLP+SWE M+  VSNS+G   LKF+ + D  L+EE RR +     STS A N
Subjt:  KIEEEVKAMRLLTSLPDSWEMMKTVVSNSLGENSLKFSAICDVTLSEEARRKLGKMYESTSGAEN

A0A0D3BM55 Uncharacterized protein1.1e-2543.03Show/hide
Query:  QDFGGKTSGYDRQSLEEMDEQAVANIRMTLSMGVCSLVSKETSAKELLKALQDRYEKPSANTKIFLWTKYFNIHIDEGTSVNSHINELTDILNKLEGMSV
        Q    K    D+   E +D Q +  IR+TLS  V   V+KE + + L+K L D YEKPSAN K+FL  K F++ ++EG  V +H+NE   I+N+L  + +
Subjt:  QDFGGKTSGYDRQSLEEMDEQAVANIRMTLSMGVCSLVSKETSAKELLKALQDRYEKPSANTKIFLWTKYFNIHIDEGTSVNSHINELTDILNKLEGMSV

Query:  KIEEEVKAMRLLTSLPDSWEMMKTVVSNSLGENSLKFSAICDVTLSEEARRKLGKMYESTSGAEN
        + ++EV+A+ LL SLP+SWE M+  VSNS+G   LKF+ + D  L+EE RR +     STS A N
Subjt:  KIEEEVKAMRLLTSLPDSWEMMKTVVSNSLGENSLKFSAICDVTLSEEARRKLGKMYESTSGAEN

A0A0D3CS45 Uncharacterized protein1.1e-2543.64Show/hide
Query:  QDFGGKTSGYDRQSLEEMDEQAVANIRMTLSMGVCSLVSKETSAKELLKALQDRYEKPSANTKIFLWTKYFNIHIDEGTSVNSHINELTDILNKLEGMSV
        Q    K    D+   E +D Q +  IR+TLS  V   V+KE   + L+K L D YEKPSAN K+FL  K F++ ++EG  V +H+NE   I+N+L  + +
Subjt:  QDFGGKTSGYDRQSLEEMDEQAVANIRMTLSMGVCSLVSKETSAKELLKALQDRYEKPSANTKIFLWTKYFNIHIDEGTSVNSHINELTDILNKLEGMSV

Query:  KIEEEVKAMRLLTSLPDSWEMMKTVVSNSLGENSLKFSAICDVTLSEEARRKLGKMYESTSGAEN
        + E+EV+A+ LL SLP+SWE M+  VSNS+G   LKF+ + D  L+EE RR +     STS A N
Subjt:  KIEEEVKAMRLLTSLPDSWEMMKTVVSNSLGENSLKFSAICDVTLSEEARRKLGKMYESTSGAEN

A0A3P6FTI2 Abhydrolase_3 domain-containing protein4.8e-2642.69Show/hide
Query:  YVQEDTQDFGGKTSGYDRQSLEEMDEQAVANIRMTLSMGVCSLVSKETSAKELLKALQDRYEKPSANTKIFLWTKYFNIHIDEGTSVNSHINELTDILNK
        YV++  Q    K    D+   E +D Q +  IR+TLS  V   V+KE + + L+K L D YEKPSAN K+FL  K F++ ++EG  V +H+NE   I+N+
Subjt:  YVQEDTQDFGGKTSGYDRQSLEEMDEQAVANIRMTLSMGVCSLVSKETSAKELLKALQDRYEKPSANTKIFLWTKYFNIHIDEGTSVNSHINELTDILNK

Query:  LEGMSVKIEEEVKAMRLLTSLPDSWEMMKTVVSNSLGENSLKFSAICDVTLSEEARRKLGKMYESTSGAEN
        L  + ++ E+EV+A+ LL SLP+SWE M+  VSN +G   LKF+ + D  L+EE RR +     STS A N
Subjt:  LEGMSVKIEEEVKAMRLLTSLPDSWEMMKTVVSNSLGENSLKFSAICDVTLSEEARRKLGKMYESTSGAEN

A0A803NDX7 Uncharacterized protein3.1e-2546.67Show/hide
Query:  MDEQAVANIRMTLSMGVCSLVSKETSAKELLKALQDRYEKPSANTKIFLWTKYFNIHIDEGTSVNSHINELTDILNKLEGMSVKIEEEVKAMRLLTSLPD
        +D QA+  IR+TLS  V   ++KET+   L+KAL + YEKPSA+ K+ L  + F++ + EG SV  H+NEL  +  +L  + +K ++EV A+ LL+SLPD
Subjt:  MDEQAVANIRMTLSMGVCSLVSKETSAKELLKALQDRYEKPSANTKIFLWTKYFNIHIDEGTSVNSHINELTDILNKLEGMSVKIEEEVKAMRLLTSLPD

Query:  SWEMMKTVVSNSLGENSLKFSAICDVTLSEEARRK
        SW    T VS+S G N LKF  +CD+ LSEE RR+
Subjt:  SWEMMKTVVSNSLGENSLKFSAICDVTLSEEARRK

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.9e-1230.88Show/hide
Query:  EMDEQAVANIRMTLSMGVCSLVSKETSAKELLKALQDRYEKPSANTKIFLWTKYFNIHIDEGTSVNSHINELTDILNKLEGMSVKIEEEVKAMRLLTSLP
        ++DE+A + IR+ LS  V + +  E +A+ +   L+  Y   +   K++L  + + +H+ EGT+  SH+N    ++ +L  + VKIEEE KA+ LL SLP
Subjt:  EMDEQAVANIRMTLSMGVCSLVSKETSAKELLKALQDRYEKPSANTKIFLWTKYFNIHIDEGTSVNSHINELTDILNKLEGMSVKIEEEVKAMRLLTSLP

Query:  DSWEMMKTVVSNSLGENSLKFSAICDVTLSEEARRK
         S++ + T + +  G+ +++   +    L  E  RK
Subjt:  DSWEMMKTVVSNSLGENSLKFSAICDVTLSEEARRK

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTTTTCTGGTTGTGAGGGAGAGACCGGAATGAAGACTGGGATGGACAACGAGATAGTGAATGAGGGAGGGGAAGGACTGAGACAAGGACGGAAAGGAGGGGAGGG
TTGGGTTTTGTGTTGGTGCACAAACGTGGCAGTGGCGGCAAGTAGAGTTGGCAGAGAACAAAACGAGAACTTAATCTGTATTGTGTTGTCGGCAGCCCGTTCTCGTGAGT
TTTTGGAAGATGCAAGTAAAAGATCTTCTTACGTGCAAGAAGATACACAAGACTTTGGGGGAAAGACCAGCGGATATGACAGACAAAGCTTGGAAGAGATGGATGAGCAG
GCTGTTGCAAATATCAGAATGACACTATCAATGGGGGTATGTAGTCTTGTGTCAAAAGAGACGTCTGCAAAAGAGTTGTTGAAGGCCTTGCAAGACAGGTATGAAAAACC
TTCTGCCAATACAAAAATATTTCTATGGACGAAGTATTTTAATATCCACATAGATGAGGGAACCTCGGTGAATTCCCACATTAATGAGCTTACCGATATCTTGAACAAGT
TAGAAGGGATGAGTGTCAAGATTGAAGAGGAGGTAAAAGCTATGAGACTGTTGACATCTTTGCCTGACAGTTGGGAGATGATGAAGACCGTGGTATCGAATTCGCTAGGA
GAAAATAGCTTGAAATTTTCAGCTATTTGTGATGTCACCTTATCTGAGGAAGCCCGGAGAAAATTAGGGAAAATGTATGAATCTACTTCAGGGGCAGAAAATAGGGTTGA
ATAA
mRNA sequenceShow/hide mRNA sequence
ATGAACTTTTCTGGTTGTGAGGGAGAGACCGGAATGAAGACTGGGATGGACAACGAGATAGTGAATGAGGGAGGGGAAGGACTGAGACAAGGACGGAAAGGAGGGGAGGG
TTGGGTTTTGTGTTGGTGCACAAACGTGGCAGTGGCGGCAAGTAGAGTTGGCAGAGAACAAAACGAGAACTTAATCTGTATTGTGTTGTCGGCAGCCCGTTCTCGTGAGT
TTTTGGAAGATGCAAGTAAAAGATCTTCTTACGTGCAAGAAGATACACAAGACTTTGGGGGAAAGACCAGCGGATATGACAGACAAAGCTTGGAAGAGATGGATGAGCAG
GCTGTTGCAAATATCAGAATGACACTATCAATGGGGGTATGTAGTCTTGTGTCAAAAGAGACGTCTGCAAAAGAGTTGTTGAAGGCCTTGCAAGACAGGTATGAAAAACC
TTCTGCCAATACAAAAATATTTCTATGGACGAAGTATTTTAATATCCACATAGATGAGGGAACCTCGGTGAATTCCCACATTAATGAGCTTACCGATATCTTGAACAAGT
TAGAAGGGATGAGTGTCAAGATTGAAGAGGAGGTAAAAGCTATGAGACTGTTGACATCTTTGCCTGACAGTTGGGAGATGATGAAGACCGTGGTATCGAATTCGCTAGGA
GAAAATAGCTTGAAATTTTCAGCTATTTGTGATGTCACCTTATCTGAGGAAGCCCGGAGAAAATTAGGGAAAATGTATGAATCTACTTCAGGGGCAGAAAATAGGGTTGA
ATAA
Protein sequenceShow/hide protein sequence
MNFSGCEGETGMKTGMDNEIVNEGGEGLRQGRKGGEGWVLCWCTNVAVAASRVGREQNENLICIVLSAARSREFLEDASKRSSYVQEDTQDFGGKTSGYDRQSLEEMDEQ
AVANIRMTLSMGVCSLVSKETSAKELLKALQDRYEKPSANTKIFLWTKYFNIHIDEGTSVNSHINELTDILNKLEGMSVKIEEEVKAMRLLTSLPDSWEMMKTVVSNSLG
ENSLKFSAICDVTLSEEARRKLGKMYESTSGAENRVE