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Moc09g29230 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g29230
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr9:21986645..21989363
RNA-Seq ExpressionMoc09g29230
SyntenyMoc09g29230
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAG1857269.1 unnamed protein product, partial [Musa acuminata subsp. malaccensis]3.6e-0666.67Show/hide
Query:  DLALRIEQPPSPLVKSYSDKRRFLEKCDCSNRMCLTIIKHGIPEAFRG
        DLALR +QP S    S  D+RR  EK D SNRM L IIKHGIPEAFRG
Subjt:  DLALRIEQPPSPLVKSYSDKRRFLEKCDCSNRMCLTIIKHGIPEAFRG

KAF1866837.1 hypothetical protein Lal_00018223 [Lupinus albus]1.6e-0640.19Show/hide
Query:  LLVSFRVVFVLHNTMQ---ISKFLNSSPDLSTFVLSHLRGLSFVRTSNNMGSHM-LHGSDLALRIEQPPSPLVKSYSDKRRFLEKCDCSNRMCLTIIKHG
        L+++ RV   ++ T+Q   I+    +S   +   +S L G +F     NM   +     D ALR+EQPP PL  S S++ +  EK + SNRMCL IIK G
Subjt:  LLVSFRVVFVLHNTMQ---ISKFLNSSPDLSTFVLSHLRGLSFVRTSNNMGSHM-LHGSDLALRIEQPPSPLVKSYSDKRRFLEKCDCSNRMCLTIIKHG

Query:  IPEAFRG
        IPE FRG
Subjt:  IPEAFRG

KAF1867862.1 hypothetical protein Lal_00012758 [Lupinus albus]4.3e-0762.5Show/hide
Query:  DLALRIEQPPSPLVKSYSDKRRFLEKCDCSNRMCLTIIKHGIPEAFRG
        D ALR+EQPP PL  S S++R+  E+ + SNRMCL IIK GIPE FRG
Subjt:  DLALRIEQPPSPLVKSYSDKRRFLEKCDCSNRMCLTIIKHGIPEAFRG

PNX82777.1 hypothetical protein L195_g038812, partial [Trifolium pratense]9.6e-0764.58Show/hide
Query:  DLALRIEQPPSPLVKSYSDKRRFLEKCDCSNRMCLTIIKHGIPEAFRG
        DLALR EQP SP   + S++R + EK D SNRMCL IIK GIPE FRG
Subjt:  DLALRIEQPPSPLVKSYSDKRRFLEKCDCSNRMCLTIIKHGIPEAFRG

XP_014515594.1 uncharacterized protein LOC106773413 [Vigna radiata var. radiata]7.3e-0764.58Show/hide
Query:  DLALRIEQPPSPLVKSYSDKRRFLEKCDCSNRMCLTIIKHGIPEAFRG
        DLALRIE+PPS    S SD+R+  EK D SNRMCL +IKH IPE +RG
Subjt:  DLALRIEQPPSPLVKSYSDKRRFLEKCDCSNRMCLTIIKHGIPEAFRG

TrEMBL top hitse value%identityAlignment
A0A1S3VBT2 uncharacterized protein LOC1067734133.5e-0764.58Show/hide
Query:  DLALRIEQPPSPLVKSYSDKRRFLEKCDCSNRMCLTIIKHGIPEAFRG
        DLALRIE+PPS    S SD+R+  EK D SNRMCL +IKH IPE +RG
Subjt:  DLALRIEQPPSPLVKSYSDKRRFLEKCDCSNRMCLTIIKHGIPEAFRG

A0A2K3LW71 CCHC-type domain-containing protein (Fragment)4.6e-0764.58Show/hide
Query:  DLALRIEQPPSPLVKSYSDKRRFLEKCDCSNRMCLTIIKHGIPEAFRG
        DLALR EQP SP   + S++R + EK D SNRMCL IIK GIPE FRG
Subjt:  DLALRIEQPPSPLVKSYSDKRRFLEKCDCSNRMCLTIIKHGIPEAFRG

A0A6A5M0Z6 Uncharacterized protein7.9e-0740.19Show/hide
Query:  LLVSFRVVFVLHNTMQ---ISKFLNSSPDLSTFVLSHLRGLSFVRTSNNMGSHM-LHGSDLALRIEQPPSPLVKSYSDKRRFLEKCDCSNRMCLTIIKHG
        L+++ RV   ++ T+Q   I+    +S   +   +S L G +F     NM   +     D ALR+EQPP PL  S S++ +  EK + SNRMCL IIK G
Subjt:  LLVSFRVVFVLHNTMQ---ISKFLNSSPDLSTFVLSHLRGLSFVRTSNNMGSHM-LHGSDLALRIEQPPSPLVKSYSDKRRFLEKCDCSNRMCLTIIKHG

Query:  IPEAFRG
        IPE FRG
Subjt:  IPEAFRG

A0A6A5MB07 CCHC-type domain-containing protein2.1e-0762.5Show/hide
Query:  DLALRIEQPPSPLVKSYSDKRRFLEKCDCSNRMCLTIIKHGIPEAFRG
        D ALR+EQPP PL  S S++R+  E+ + SNRMCL IIK GIPE FRG
Subjt:  DLALRIEQPPSPLVKSYSDKRRFLEKCDCSNRMCLTIIKHGIPEAFRG

A0A6A5MJS6 Uncharacterized protein5.1e-0660.42Show/hide
Query:  DLALRIEQPPSPLVKSYSDKRRFLEKCDCSNRMCLTIIKHGIPEAFRG
        D ALR+EQPPS +  S S++R+  EK + SNR+ L IIKHGIPEAF G
Subjt:  DLALRIEQPPSPLVKSYSDKRRFLEKCDCSNRMCLTIIKHGIPEAFRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGATCACTGGCTGGGCTGTGGGCCGAGCACGGCTCGGGACCGAGCCCCGGGTCGGGGCCGAGCACCGGGTCGGGACCGAGCACCGGGTCGGGACCGAGCCCTTCG
TGGCTCAGTGGGCTTCCCTCCGGTTGCTTTCCTCGTTCTCTACCCCGGCGTTAGGTCCTTCTTTGGGCCGGCCCGTTATGTCACGGGCCGGTCTTCCCCAATCAGACTTC
AACTTCTTGTCTCGTTTCGGGTCGTTTTTGTTCTCCATAACACCATGCAAATCAGTAAGTTTCTTAATAGCTCACCAGATTTGTCAACGTTTGTATTGAGTCATTTGAGA
GGTCTCTCTTTTGTTAGAACTTCTAATAACATGGGGTCACACATGTTGCATGGATCCGACCTTGCACTTAGGATAGAGCAACCTCCTTCTCCTTTAGTCAAGAGTTATTC
TGATAAAAGGAGATTTCTTGAGAAGTGTGATTGCTCAAACCGCATGTGTCTAACGATCATAAAGCACGGCATTCCAGAGGCATTTAGGGGGTACAATATTCGAAGGGATA
ACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGATCACTGGCTGGGCTGTGGGCCGAGCACGGCTCGGGACCGAGCCCCGGGTCGGGGCCGAGCACCGGGTCGGGACCGAGCACCGGGTCGGGACCGAGCCCTTCG
TGGCTCAGTGGGCTTCCCTCCGGTTGCTTTCCTCGTTCTCTACCCCGGCGTTAGGTCCTTCTTTGGGCCGGCCCGTTATGTCACGGGCCGGTCTTCCCCAATCAGACTTC
AACTTCTTGTCTCGTTTCGGGTCGTTTTTGTTCTCCATAACACCATGCAAATCAGTAAGTTTCTTAATAGCTCACCAGATTTGTCAACGTTTGTATTGAGTCATTTGAGA
GGTCTCTCTTTTGTTAGAACTTCTAATAACATGGGGTCACACATGTTGCATGGATCCGACCTTGCACTTAGGATAGAGCAACCTCCTTCTCCTTTAGTCAAGAGTTATTC
TGATAAAAGGAGATTTCTTGAGAAGTGTGATTGCTCAAACCGCATGTGTCTAACGATCATAAAGCACGGCATTCCAGAGGCATTTAGGGGGTACAATATTCGAAGGGATA
ACTAA
Protein sequenceShow/hide protein sequence
MGDHWLGCGPSTARDRAPGRGRAPGRDRAPGRDRALRGSVGFPPVAFLVLYPGVRSFFGPARYVTGRSSPIRLQLLVSFRVVFVLHNTMQISKFLNSSPDLSTFVLSHLR
GLSFVRTSNNMGSHMLHGSDLALRIEQPPSPLVKSYSDKRRFLEKCDCSNRMCLTIIKHGIPEAFRGYNIRRDN