; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g29450 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g29450
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr9:22209821..22210323
RNA-Seq ExpressionMoc09g29450
SyntenyMoc09g29450
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156989.1 uncharacterized protein LOC111023818 [Momordica charantia]2.7e-2248.25Show/hide
Query:  MRFLAESEECSVLKILDKALIEELEEEAMLEHLENVDSRSDVDDIEE--DPDVIYLKKEPPVLELKALPQHLKYAYLGSSKKLSIIIAAGLPQEKEQMLL
        +++  + EECS L+I D  + +E++ E +L  LE+  +R   D ++    P V+    + P LELK LP HLKYAYLG  + L + IAA L +EKE  L+
Subjt:  MRFLAESEECSVLKILDKALIEELEEEAMLEHLENVDSRSDVDDIEE--DPDVIYLKKEPPVLELKALPQHLKYAYLGSSKKLSIIIAAGLPQEKEQMLL

Query:  SMLR----AIRWTIADIRGISPDFCMHKIVLEEASKNSIELQR
         MLR    AI WT+ADI+GISP +CMHKI LEE  KNSIE QR
Subjt:  SMLR----AIRWTIADIRGISPDFCMHKIVLEEASKNSIELQR

XP_022158578.1 uncharacterized protein LOC111025032 [Momordica charantia]7.3e-2046.95Show/hide
Query:  ECSVLKILDKALIEELEEEAMLE-HLENVDSRSD-VDDIEEDPDVIYLK------------------------------KEPPVLELKALPQHLKYAYLG
        E  VL++LD+A++E L  E MLE H   VD+  D VD+I +  +++YL                                EPP LELKALPQHLKYAYL 
Subjt:  ECSVLKILDKALIEELEEEAMLE-HLENVDSRSD-VDDIEEDPDVIYLK------------------------------KEPPVLELKALPQHLKYAYLG

Query:  SSKKLSIIIAAGLPQEKEQMLLSML----RAIRWTIADIRGISPDFCMHKIVLEEASKNSIELQ
        +S  L IIIAA L  EKE  LL++L    +AI WTIA I  ISP +CMHKIVLEE  KNS+E Q
Subjt:  SSKKLSIIIAAGLPQEKEQMLLSML----RAIRWTIADIRGISPDFCMHKIVLEEASKNSIELQ

XP_024017688.1 uncharacterized protein K02A2.6-like [Morus notabilis]6.0e-2246.54Show/hide
Query:  MRFLAESEECSVLKILDKALIEELEE-------EAMLEHLENVDSR----------SDVDDIE-EDPDVIYLKKEPPVLELKALPQHLKYAYLGSSKKLS
        MRF +E EECS + ++D  + E LE        E  +E +E V +             +D IE E      L KEPP+L+LK LP HL+YAYLG S  L 
Subjt:  MRFLAESEECSVLKILDKALIEELEE-------EAMLEHLENVDSR----------SDVDDIE-EDPDVIYLKKEPPVLELKALPQHLKYAYLGSSKKLS

Query:  IIIAAGLPQEKEQMLLSMLR----AIRWTIADIRGISPDFCMHKIVLEEASKNSIELQR
        +II+A L Q++E  L+ +LR    AI WTIADI+GISP FCMHKI+LE+  K SIE QR
Subjt:  IIIAAGLPQEKEQMLLSMLR----AIRWTIADIRGISPDFCMHKIVLEEASKNSIELQR

XP_024028757.1 uncharacterized protein LOC112093792 [Morus notabilis]1.6e-1939.88Show/hide
Query:  MRFLAESEECSVLKILDKALIEELEE---EAMLEHLENVDSRSDVDDIEEDPDVIYLK-----------------------------KEPPVLELKALPQ
        MRF  E EECS + +LD  +  E E+   E ++   + +D  S++++   D  V  L+                             +EPP+LEL+ LP 
Subjt:  MRFLAESEECSVLKILDKALIEELEE---EAMLEHLENVDSRSDVDDIEEDPDVIYLK-----------------------------KEPPVLELKALPQ

Query:  HLKYAYLGSSKKLSIIIAAGLPQEKEQMLLSML----RAIRWTIADIRGISPDFCMHKIVLEEASKNSIELQR
        HL+YAYLG S  L +IIA+GL   +E  LL +L    RAI WTIADI+GISP  CMHKI+L+E   NS+E QR
Subjt:  HLKYAYLGSSKKLSIIIAAGLPQEKEQMLLSML----RAIRWTIADIRGISPDFCMHKIVLEEASKNSIELQR

XP_030505517.1 uncharacterized protein LOC115720508 [Cannabis sativa]2.8e-1940.7Show/hide
Query:  MRFLAESEECSVLKILDKALIEELEEEAMLEHLENVDSRSDVDDIEEDPD--------------------VIYLK-----------KEPPVLELKALPQH
        MRFL E EECS + ++D  ++E   +EA  +  + + S  +++D+ ED D                     + LK           +EPP LELK LP H
Subjt:  MRFLAESEECSVLKILDKALIEELEEEAMLEHLENVDSRSDVDDIEEDPD--------------------VIYLK-----------KEPPVLELKALPQH

Query:  LKYAYLGSSKKLSIIIAAGLPQEKEQMLLSML----RAIRWTIADIRGISPDFCMHKIVLEEASKNSIELQR
        LKYAYLG +  L +IIAA L  E E  LL +L    + I WT+ADIRGISP  C HKI+LE    NS+E QR
Subjt:  LKYAYLGSSKKLSIIIAAGLPQEKEQMLLSML----RAIRWTIADIRGISPDFCMHKIVLEEASKNSIELQR

TrEMBL top hitse value%identityAlignment
A0A2G9HC16 Reverse transcriptase8.7e-1944.08Show/hide
Query:  MRFLAESEECSVLKILDKALIEELEEE--------AMLEHLENVDSRSDVDDIEEDPDVIYLK---KEPPVLELKALPQHLKYAYLGSSKKLSIIIAAGL
        M+F  ES+EC  +  L++AL++ ++E+         +L+ L+   SR  V+ +E       LK   +EPP LELK L  HL YAYLG S  L +II++ L
Subjt:  MRFLAESEECSVLKILDKALIEELEEE--------AMLEHLENVDSRSDVDDIEEDPDVIYLK---KEPPVLELKALPQHLKYAYLGSSKKLSIIIAAGL

Query:  PQEKEQMLLSMLR----AIRWTIADIRGISPDFCMHKIVLEEASKNSIELQR
           + + LL +LR    AI WTIADI+GISP FCMHKI+LE+  K S+E QR
Subjt:  PQEKEQMLLSMLR----AIRWTIADIRGISPDFCMHKIVLEEASKNSIELQR

A0A4Y1QWW9 Reverse transcriptase4.3e-1839.73Show/hide
Query:  AESEECSVLKILDKALIEELEEEAMLEHLENVDS--------RSDVDDIEEDPDVIY-LKKEPPVLELKALPQHLKYAYLGSSKKLSIIIAAGLPQEKEQ
        AE ++C  + ++D+ L  + E+E +LE++  ++S        R+  + + E    +   +++PP LELK LP+HLKYAYLG+++ L +IIAA L   +E 
Subjt:  AESEECSVLKILDKALIEELEEEAMLEHLENVDS--------RSDVDDIEEDPDVIY-LKKEPPVLELKALPQHLKYAYLGSSKKLSIIIAAGLPQEKEQ

Query:  MLLSMLR----AIRWTIADIRGISPDFCMHKIVLEEASKNSIELQR
         LL +LR    A+ WTIADI+GISP  CMH+I++E+  K +++ QR
Subjt:  MLLSMLR----AIRWTIADIRGISPDFCMHKIVLEEASKNSIELQR

A0A6J1DV77 uncharacterized protein LOC1110238181.3e-2248.25Show/hide
Query:  MRFLAESEECSVLKILDKALIEELEEEAMLEHLENVDSRSDVDDIEE--DPDVIYLKKEPPVLELKALPQHLKYAYLGSSKKLSIIIAAGLPQEKEQMLL
        +++  + EECS L+I D  + +E++ E +L  LE+  +R   D ++    P V+    + P LELK LP HLKYAYLG  + L + IAA L +EKE  L+
Subjt:  MRFLAESEECSVLKILDKALIEELEEEAMLEHLENVDSRSDVDDIEE--DPDVIYLKKEPPVLELKALPQHLKYAYLGSSKKLSIIIAAGLPQEKEQMLL

Query:  SMLR----AIRWTIADIRGISPDFCMHKIVLEEASKNSIELQR
         MLR    AI WT+ADI+GISP +CMHKI LEE  KNSIE QR
Subjt:  SMLR----AIRWTIADIRGISPDFCMHKIVLEEASKNSIELQR

A0A6J1DWH3 uncharacterized protein LOC1110250323.5e-2046.95Show/hide
Query:  ECSVLKILDKALIEELEEEAMLE-HLENVDSRSD-VDDIEEDPDVIYLK------------------------------KEPPVLELKALPQHLKYAYLG
        E  VL++LD+A++E L  E MLE H   VD+  D VD+I +  +++YL                                EPP LELKALPQHLKYAYL 
Subjt:  ECSVLKILDKALIEELEEEAMLE-HLENVDSRSD-VDDIEEDPDVIYLK------------------------------KEPPVLELKALPQHLKYAYLG

Query:  SSKKLSIIIAAGLPQEKEQMLLSML----RAIRWTIADIRGISPDFCMHKIVLEEASKNSIELQ
        +S  L IIIAA L  EKE  LL++L    +AI WTIA I  ISP +CMHKIVLEE  KNS+E Q
Subjt:  SSKKLSIIIAAGLPQEKEQMLLSML----RAIRWTIADIRGISPDFCMHKIVLEEASKNSIELQ

A0A6J1E110 uncharacterized protein LOC1110254245.7e-1854.9Show/hide
Query:  SDVDDIEEDPDVIYLKKEPPVLELKALPQHLKYAYLGSSKKLSIIIAAGLPQEKEQMLLSML----RAIRWTIADIRGISPDFCMHKIVLEEASKNSIEL
        +DV     +P ++    EPP LE K LP HLKYAYLG +  L +IIA+ L    E  LL +L    +AI WTIADIRGIS  FCMHKI+LEE +KNSIE 
Subjt:  SDVDDIEEDPDVIYLKKEPPVLELKALPQHLKYAYLGSSKKLSIIIAAGLPQEKEQMLLSML----RAIRWTIADIRGISPDFCMHKIVLEEASKNSIEL

Query:  QR
        QR
Subjt:  QR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTTCCTTGCTGAATCAGAAGAATGCTCAGTGCTTAAAATTCTAGATAAAGCATTAATAGAAGAGTTGGAAGAAGAAGCAATGCTAGAGCATCTAGAAAATGTTGA
CTCTAGAAGTGATGTTGATGATATAGAAGAAGACCCAGATGTTATTTACCTGAAAAAAGAACCACCAGTCCTGGAGCTTAAGGCACTACCGCAACATTTGAAGTATGCCT
ACTTAGGTTCGTCAAAGAAATTGTCGATCATTATTGCAGCGGGCCTGCCCCAAGAGAAAGAGCAGATGTTGCTGAGTATGCTGAGAGCAATTAGGTGGACCATTGCAGAT
ATAAGGGGAATAAGCCCCGACTTTTGTATGCATAAGATCGTGTTGGAGGAAGCAAGCAAGAACTCTATCGAGCTCCAGCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGTTCCTTGCTGAATCAGAAGAATGCTCAGTGCTTAAAATTCTAGATAAAGCATTAATAGAAGAGTTGGAAGAAGAAGCAATGCTAGAGCATCTAGAAAATGTTGA
CTCTAGAAGTGATGTTGATGATATAGAAGAAGACCCAGATGTTATTTACCTGAAAAAAGAACCACCAGTCCTGGAGCTTAAGGCACTACCGCAACATTTGAAGTATGCCT
ACTTAGGTTCGTCAAAGAAATTGTCGATCATTATTGCAGCGGGCCTGCCCCAAGAGAAAGAGCAGATGTTGCTGAGTATGCTGAGAGCAATTAGGTGGACCATTGCAGAT
ATAAGGGGAATAAGCCCCGACTTTTGTATGCATAAGATCGTGTTGGAGGAAGCAAGCAAGAACTCTATCGAGCTCCAGCGTTGA
Protein sequenceShow/hide protein sequence
MRFLAESEECSVLKILDKALIEELEEEAMLEHLENVDSRSDVDDIEEDPDVIYLKKEPPVLELKALPQHLKYAYLGSSKKLSIIIAAGLPQEKEQMLLSMLRAIRWTIAD
IRGISPDFCMHKIVLEEASKNSIELQR