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Moc09g29540 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g29540
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag-pro-like protein
Genome locationchr9:22310000..22311147
RNA-Seq ExpressionMoc09g29540
SyntenyMoc09g29540
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147189.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]3.3e-5669.33Show/hide
Query:  TSSNPVHD---PQETPPYPLGAQQVLTNIIFQEPEQVVAPPTVPNLGDTPAEKYPEGQNAPNNEKLKVLEERLRTVEGTDVYGNIDASQLCLVSGLGIPP
        T+ NP++D    Q   P+  GAQQ+ TNIIF+EPEQ+++PPTV NLGD  A+  P GQNAP+NEK +VL+ERLR +E TDV+GNIDASQLC VSGL IPP
Subjt:  TSSNPVHD---PQETPPYPLGAQQVLTNIIFQEPEQVVAPPTVPNLGDTPAEKYPEGQNAPNNEKLKVLEERLRTVEGTDVYGNIDASQLCLVSGLGIPP

Query:  KFMVPKFEKYDGSYCPKNHLIMYRRKMAAYIQNDKLLIHCFQNSFFGPASHWYMQLDSSHVDS
        K  VP+FEKY+GS CPKNHL MY RKMAAY+QNDKLLIHCFQ+S  GPAS WYMQLDSSHV S
Subjt:  KFMVPKFEKYDGSYCPKNHLIMYRRKMAAYIQNDKLLIHCFQNSFFGPASHWYMQLDSSHVDS

XP_022149382.1 uncharacterized protein LOC111017812 [Momordica charantia]1.0e-4956.93Show/hide
Query:  DASLENVIAPKGIEELREKLDVIFLALEKGKIVADLATSSNPVHDPQETPPYPL-------------------------------------GAQQVLTNI
        D   E     K IEELREKLDVI LALEKGK VAD  TSSNPVHD QE PPYPL                                     G QQ+ TNI
Subjt:  DASLENVIAPKGIEELREKLDVIFLALEKGKIVADLATSSNPVHDPQETPPYPL-------------------------------------GAQQVLTNI

Query:  IFQEPEQVVAPPTVPNLGDTPAEKYPEGQNAPNNEKLKVLEERLRTVEGTDVYGNIDASQLCLVSGLGIPPKFMVPKFEKYDGSYCPKNHLIMYRRKMAA
        IF+EPEQ++ PPTV NLG    +  P GQ+ P+NEK +VLEERL  VEGTDV+GNIDASQLCL+SGL I  KF VP+FEKYDGS CPKNHLIMY + MAA
Subjt:  IFQEPEQVVAPPTVPNLGDTPAEKYPEGQNAPNNEKLKVLEERLRTVEGTDVYGNIDASQLCLVSGLGIPPKFMVPKFEKYDGSYCPKNHLIMYRRKMAA

Query:  YI
        Y+
Subjt:  YI

XP_022155098.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica charantia]9.1e-6256.67Show/hide
Query:  DASLENVIAPKGIEELREKLDVIFLALEKGKIVADLATSSNPVHDP-------------------------------------------QETPPYPLGAQ
        D   E     K IEELREKLD I LALEKGK +A+   +SNP+H+P                                           Q  PP   G  
Subjt:  DASLENVIAPKGIEELREKLDVIFLALEKGKIVADLATSSNPVHDP-------------------------------------------QETPPYPLGAQ

Query:  QVLTNIIFQEPEQVVAPPTVPNLGDTPAEKYPEGQNAPNNEKLKVLEERLRTVEGTDVYGNIDASQLCLVSGLGIPPKFMVPKFEKYDGSYCPKNHLIMY
        Q    IIFQEPEQV+APPTV NLG   A K PE Q AP++EKL+VLEERLR VEGTDV+GNIDASQLCL SGL IPPKF +P+FEKY+GS CPKNHLIMY
Subjt:  QVLTNIIFQEPEQVVAPPTVPNLGDTPAEKYPEGQNAPNNEKLKVLEERLRTVEGTDVYGNIDASQLCLVSGLGIPPKFMVPKFEKYDGSYCPKNHLIMY

Query:  RRKMAAYIQNDKLLIHCFQNSFFGPASHWYMQLDSSHVDS
         RKMAAYIQNDKLLIHCFQ+S  GP S WYM LDS HV S
Subjt:  RRKMAAYIQNDKLLIHCFQNSFFGPASHWYMQLDSSHVDS

XP_022157796.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]7.7e-6961.11Show/hide
Query:  DASLENVIAPKGIEELREKLDVIFLALEKGKIVADLATSSNPVHDPQETPPYP-------------------------------------LGAQQVLTNI
        D   E     K IEELREKLD I L LEKGK  AD ATSSNP+H+PQETPPYP                                      GAQQ+ TNI
Subjt:  DASLENVIAPKGIEELREKLDVIFLALEKGKIVADLATSSNPVHDPQETPPYP-------------------------------------LGAQQVLTNI

Query:  IFQEPEQVVAPPTVPNLGDTPAEKYPEGQNAPNNEKLKVLEERLRTVEGTDVYGNIDASQLCLVSGLGIPPKFMVPKFEKYDGSYCPKNHLIMYRRKMAA
        IF+EPEQ+++PPTV NLG  PA+  P  QNA + EK +VLEERLR +EGTDV+GNIDASQLCLVSGL IPPKF VP+FEKYDGS CPKNHLIMY RKM A
Subjt:  IFQEPEQVVAPPTVPNLGDTPAEKYPEGQNAPNNEKLKVLEERLRTVEGTDVYGNIDASQLCLVSGLGIPPKFMVPKFEKYDGSYCPKNHLIMYRRKMAA

Query:  YIQNDKLLIHCFQNSFFGPASHWYMQLDSSHVDS
        Y+QN KLLIHCFQ+S  G AS WYMQLDSSHV S
Subjt:  YIQNDKLLIHCFQNSFFGPASHWYMQLDSSHVDS

XP_022158986.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia]9.7e-4876.38Show/hide
Query:  VVAPPTVPNLGDTPAEKYPEGQNAPNNEKLKVLEERLRTVEGTDVYGNIDASQLCLVSGLGIPPKFMVPKFEKYDGSYCPKNHLIMYRRKMAAYIQNDKL
        +++PPTV NLG  PA+    GQNAP+NEK +VLEERLR +EGT V+GNIDASQLCLVSGL IPPKF VP+FEKYDGS CPKNHLIMY RKMAAY+QNDKL
Subjt:  VVAPPTVPNLGDTPAEKYPEGQNAPNNEKLKVLEERLRTVEGTDVYGNIDASQLCLVSGLGIPPKFMVPKFEKYDGSYCPKNHLIMYRRKMAAYIQNDKL

Query:  LIHCFQNSFFGPASHWYMQLDSSHVDS
        LIHCFQ+S  GPAS WYMQLDSS+V S
Subjt:  LIHCFQNSFFGPASHWYMQLDSSHVDS

TrEMBL top hitse value%identityAlignment
A0A6J1D099 Ribonuclease H1.6e-5669.33Show/hide
Query:  TSSNPVHD---PQETPPYPLGAQQVLTNIIFQEPEQVVAPPTVPNLGDTPAEKYPEGQNAPNNEKLKVLEERLRTVEGTDVYGNIDASQLCLVSGLGIPP
        T+ NP++D    Q   P+  GAQQ+ TNIIF+EPEQ+++PPTV NLGD  A+  P GQNAP+NEK +VL+ERLR +E TDV+GNIDASQLC VSGL IPP
Subjt:  TSSNPVHD---PQETPPYPLGAQQVLTNIIFQEPEQVVAPPTVPNLGDTPAEKYPEGQNAPNNEKLKVLEERLRTVEGTDVYGNIDASQLCLVSGLGIPP

Query:  KFMVPKFEKYDGSYCPKNHLIMYRRKMAAYIQNDKLLIHCFQNSFFGPASHWYMQLDSSHVDS
        K  VP+FEKY+GS CPKNHL MY RKMAAY+QNDKLLIHCFQ+S  GPAS WYMQLDSSHV S
Subjt:  KFMVPKFEKYDGSYCPKNHLIMYRRKMAAYIQNDKLLIHCFQNSFFGPASHWYMQLDSSHVDS

A0A6J1D7T3 uncharacterized protein LOC1110178125.0e-5056.93Show/hide
Query:  DASLENVIAPKGIEELREKLDVIFLALEKGKIVADLATSSNPVHDPQETPPYPL-------------------------------------GAQQVLTNI
        D   E     K IEELREKLDVI LALEKGK VAD  TSSNPVHD QE PPYPL                                     G QQ+ TNI
Subjt:  DASLENVIAPKGIEELREKLDVIFLALEKGKIVADLATSSNPVHDPQETPPYPL-------------------------------------GAQQVLTNI

Query:  IFQEPEQVVAPPTVPNLGDTPAEKYPEGQNAPNNEKLKVLEERLRTVEGTDVYGNIDASQLCLVSGLGIPPKFMVPKFEKYDGSYCPKNHLIMYRRKMAA
        IF+EPEQ++ PPTV NLG    +  P GQ+ P+NEK +VLEERL  VEGTDV+GNIDASQLCL+SGL I  KF VP+FEKYDGS CPKNHLIMY + MAA
Subjt:  IFQEPEQVVAPPTVPNLGDTPAEKYPEGQNAPNNEKLKVLEERLRTVEGTDVYGNIDASQLCLVSGLGIPPKFMVPKFEKYDGSYCPKNHLIMYRRKMAA

Query:  YI
        Y+
Subjt:  YI

A0A6J1DM29 LOW QUALITY PROTEIN: uncharacterized protein LOC1110222312.6e-6257.08Show/hide
Query:  DASLENVIAPKGIEELREKLDVIFLALEKGKIVADLATSSNPVHDP-------------------------------------------QETPPYPLGAQ
        D   E     K IEELREKLD I LALEKGK +A+   +SNP+H+P                                           Q  PP   G  
Subjt:  DASLENVIAPKGIEELREKLDVIFLALEKGKIVADLATSSNPVHDP-------------------------------------------QETPPYPLGAQ

Query:  QVLTNIIFQEPEQVVAPPTVPNLGDTPAEKYPEGQNAPNNEKLKVLEERLRTVEGTDVYGNIDASQLCLVSGLGIPPKFMVPKFEKYDGSYCPKNHLIMY
        Q    IIFQEPEQV+APPTV NLG   A K PE Q AP++EKL+VLEERLR VEGTDV+GNIDASQLCL SGL IPPKF +P+FEKYDGS CPKNHLIMY
Subjt:  QVLTNIIFQEPEQVVAPPTVPNLGDTPAEKYPEGQNAPNNEKLKVLEERLRTVEGTDVYGNIDASQLCLVSGLGIPPKFMVPKFEKYDGSYCPKNHLIMY

Query:  RRKMAAYIQNDKLLIHCFQNSFFGPASHWYMQLDSSHVDS
         RKMAAYIQNDKLLIHCFQ+S  GP S WYM LDS HV S
Subjt:  RRKMAAYIQNDKLLIHCFQNSFFGPASHWYMQLDSSHVDS

A0A6J1DZ90 Ribonuclease H3.7e-6961.11Show/hide
Query:  DASLENVIAPKGIEELREKLDVIFLALEKGKIVADLATSSNPVHDPQETPPYP-------------------------------------LGAQQVLTNI
        D   E     K IEELREKLD I L LEKGK  AD ATSSNP+H+PQETPPYP                                      GAQQ+ TNI
Subjt:  DASLENVIAPKGIEELREKLDVIFLALEKGKIVADLATSSNPVHDPQETPPYP-------------------------------------LGAQQVLTNI

Query:  IFQEPEQVVAPPTVPNLGDTPAEKYPEGQNAPNNEKLKVLEERLRTVEGTDVYGNIDASQLCLVSGLGIPPKFMVPKFEKYDGSYCPKNHLIMYRRKMAA
        IF+EPEQ+++PPTV NLG  PA+  P  QNA + EK +VLEERLR +EGTDV+GNIDASQLCLVSGL IPPKF VP+FEKYDGS CPKNHLIMY RKM A
Subjt:  IFQEPEQVVAPPTVPNLGDTPAEKYPEGQNAPNNEKLKVLEERLRTVEGTDVYGNIDASQLCLVSGLGIPPKFMVPKFEKYDGSYCPKNHLIMYRRKMAA

Query:  YIQNDKLLIHCFQNSFFGPASHWYMQLDSSHVDS
        Y+QN KLLIHCFQ+S  G AS WYMQLDSSHV S
Subjt:  YIQNDKLLIHCFQNSFFGPASHWYMQLDSSHVDS

A0A6J1E2J7 Ribonuclease H4.7e-4876.38Show/hide
Query:  VVAPPTVPNLGDTPAEKYPEGQNAPNNEKLKVLEERLRTVEGTDVYGNIDASQLCLVSGLGIPPKFMVPKFEKYDGSYCPKNHLIMYRRKMAAYIQNDKL
        +++PPTV NLG  PA+    GQNAP+NEK +VLEERLR +EGT V+GNIDASQLCLVSGL IPPKF VP+FEKYDGS CPKNHLIMY RKMAAY+QNDKL
Subjt:  VVAPPTVPNLGDTPAEKYPEGQNAPNNEKLKVLEERLRTVEGTDVYGNIDASQLCLVSGLGIPPKFMVPKFEKYDGSYCPKNHLIMYRRKMAAYIQNDKL

Query:  LIHCFQNSFFGPASHWYMQLDSSHVDS
        LIHCFQ+S  GPAS WYMQLDSS+V S
Subjt:  LIHCFQNSFFGPASHWYMQLDSSHVDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAGAAAGCTGCAATGTATTCATGGCGACGCCTCATTGGAGAATGTTATAGCACCGAAAGGCATTGAGGAACTACGAGAAAAGTTAGATGTAATCTTCCTCGCGCT
AGAAAAAGGCAAGATAGTTGCGGATCTCGCTACATCTAGCAATCCCGTCCATGACCCGCAAGAAACCCCGCCTTATCCACTGGGAGCTCAGCAAGTCCTAACCAACATCA
TCTTTCAAGAGCCCGAGCAGGTCGTGGCACCACCTACAGTTCCTAATCTTGGTGATACCCCGGCGGAAAAGTACCCGGAAGGGCAAAATGCCCCTAATAATGAGAAGCTC
AAAGTGCTGGAGGAAAGATTAAGAACAGTCGAGGGAACAGACGTTTATGGCAACATTGATGCTTCTCAATTGTGCTTGGTGTCTGGGTTAGGCATTCCTCCGAAATTCAT
GGTGCCAAAATTTGAGAAATACGATGGTTCGTATTGTCCTAAGAACCATCTCATAATGTACCGCAGAAAGATGGCAGCGTACATTCAAAATGACAAATTGCTTATACACT
GTTTTCAAAACAGTTTTTTTGGTCCAGCGTCTCATTGGTACATGCAGTTGGATAGCTCTCATGTTGACTCTAGAAGTATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTAGAAAGCTGCAATGTATTCATGGCGACGCCTCATTGGAGAATGTTATAGCACCGAAAGGCATTGAGGAACTACGAGAAAAGTTAGATGTAATCTTCCTCGCGCT
AGAAAAAGGCAAGATAGTTGCGGATCTCGCTACATCTAGCAATCCCGTCCATGACCCGCAAGAAACCCCGCCTTATCCACTGGGAGCTCAGCAAGTCCTAACCAACATCA
TCTTTCAAGAGCCCGAGCAGGTCGTGGCACCACCTACAGTTCCTAATCTTGGTGATACCCCGGCGGAAAAGTACCCGGAAGGGCAAAATGCCCCTAATAATGAGAAGCTC
AAAGTGCTGGAGGAAAGATTAAGAACAGTCGAGGGAACAGACGTTTATGGCAACATTGATGCTTCTCAATTGTGCTTGGTGTCTGGGTTAGGCATTCCTCCGAAATTCAT
GGTGCCAAAATTTGAGAAATACGATGGTTCGTATTGTCCTAAGAACCATCTCATAATGTACCGCAGAAAGATGGCAGCGTACATTCAAAATGACAAATTGCTTATACACT
GTTTTCAAAACAGTTTTTTTGGTCCAGCGTCTCATTGGTACATGCAGTTGGATAGCTCTCATGTTGACTCTAGAAGTATCTGA
Protein sequenceShow/hide protein sequence
MVRKLQCIHGDASLENVIAPKGIEELREKLDVIFLALEKGKIVADLATSSNPVHDPQETPPYPLGAQQVLTNIIFQEPEQVVAPPTVPNLGDTPAEKYPEGQNAPNNEKL
KVLEERLRTVEGTDVYGNIDASQLCLVSGLGIPPKFMVPKFEKYDGSYCPKNHLIMYRRKMAAYIQNDKLLIHCFQNSFFGPASHWYMQLDSSHVDSRSI