; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g30100 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g30100
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Genome locationchr9:22681349..22684069
RNA-Seq ExpressionMoc09g30100
SyntenyMoc09g30100
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155289.1 uncharacterized protein LOC111022426 [Momordica charantia]1.7e-1232.11Show/hide
Query:  MRYNLLSHSSSNCNNKAWWKRFSKILIPPKIKVFMWKV----------------------------------------------------------ELVD
        MR+ L+ HS+SN NN+  W++F KI +PPKI+V MWKV                                                          E+  
Subjt:  MRYNLLSHSSSNCNNKAWWKRFSKILIPPKIKVFMWKV----------------------------------------------------------ELVD

Query:  YAL-------------------VRCLRSRQW----------------VGNHGSDM-----YEKADIVAAMVDVHTVLNPLLAESLAIREGMRLVMRLGFQ
        +AL                    R  R   W                V   GS +        A+IVAAM+D H V  PLL E LAIREG+RL  RLG  
Subjt:  YAL-------------------VRCLRSRQW----------------VGNHGSDM-----YEKADIVAAMVDVHTVLNPLLAESLAIREGMRLVMRLGFQ

Query:  GVMVESNSLEALNLIGEK
         VMVES+SLEALNLIG+K
Subjt:  GVMVESNSLEALNLIGEK
XP_022158489.1 uncharacterized protein LOC111024968 [Momordica charantia]4.2e-1663.01Show/hide
Query:  ADIVAAMVDVHTVLNPLLAESLAIREGMRLVMRLGFQGVMVESNSLEALNLIGEKSPWQGEATNWIEDIHVLS
        A+IV AMVD H V  PLLA+ LAIREG+ L  RLG   V+VE++SLEALNLIG+KSPW+GEA +W+EDI   +
Subjt:  ADIVAAMVDVHTVLNPLLAESLAIREGMRLVMRLGFQGVMVESNSLEALNLIGEKSPWQGEATNWIEDIHVLS
TrEMBL top hitse value%identityAlignment
A0A6J1DPU1 uncharacterized protein LOC1110224268.1e-1332.11Show/hide
Query:  MRYNLLSHSSSNCNNKAWWKRFSKILIPPKIKVFMWKV----------------------------------------------------------ELVD
        MR+ L+ HS+SN NN+  W++F KI +PPKI+V MWKV                                                          E+  
Subjt:  MRYNLLSHSSSNCNNKAWWKRFSKILIPPKIKVFMWKV----------------------------------------------------------ELVD

Query:  YAL-------------------VRCLRSRQW----------------VGNHGSDM-----YEKADIVAAMVDVHTVLNPLLAESLAIREGMRLVMRLGFQ
        +AL                    R  R   W                V   GS +        A+IVAAM+D H V  PLL E LAIREG+RL  RLG  
Subjt:  YAL-------------------VRCLRSRQW----------------VGNHGSDM-----YEKADIVAAMVDVHTVLNPLLAESLAIREGMRLVMRLGFQ

Query:  GVMVESNSLEALNLIGEK
         VMVES+SLEALNLIG+K
Subjt:  GVMVESNSLEALNLIGEK
A0A6J1DZK3 uncharacterized protein LOC1110249682.0e-1663.01Show/hide
Query:  ADIVAAMVDVHTVLNPLLAESLAIREGMRLVMRLGFQGVMVESNSLEALNLIGEKSPWQGEATNWIEDIHVLS
        A+IV AMVD H V  PLLA+ LAIREG+ L  RLG   V+VE++SLEALNLIG+KSPW+GEA +W+EDI   +
Subjt:  ADIVAAMVDVHTVLNPLLAESLAIREGMRLVMRLGFQGVMVESNSLEALNLIGEKSPWQGEATNWIEDIHVLS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAATGAGATATAACCTTCTATCGCATTCATCAAGCAATTGTAACAATAAAGCTTGGTGGAAGAGGTTTTCGAAAATCCTTATTCCTCCAAAAATTAAAGTGTTCAT
GTGGAAAGTTGAATTGGTTGATTATGCGCTGGTGAGATGTTTACGGTCTAGGCAGTGGGTCGGGAATCACGGTTCTGATATGTATGAAAAAGCCGACATTGTGGCTGCTA
TGGTGGATGTGCATACGGTGTTGAACCCTCTGTTGGCTGAATCTTTGGCAATTAGAGAAGGTATGCGGTTGGTGATGAGGTTGGGGTTTCAAGGAGTCATGGTGGAGTCA
AACTCTTTGGAGGCCTTAAATTTGATTGGGGAGAAATCTCCATGGCAAGGAGAAGCAACAAATTGGATAGAAGATATTCATGTTCTCTCGGGCATTTCAGGAAATCACGT
TCTATCACGTTTTCAGGGAATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAATGAGATATAACCTTCTATCGCATTCATCAAGCAATTGTAACAATAAAGCTTGGTGGAAGAGGTTTTCGAAAATCCTTATTCCTCCAAAAATTAAAGTGTTCAT
GTGGAAAGTTGAATTGGTTGATTATGCGCTGGTGAGATGTTTACGGTCTAGGCAGTGGGTCGGGAATCACGGTTCTGATATGTATGAAAAAGCCGACATTGTGGCTGCTA
TGGTGGATGTGCATACGGTGTTGAACCCTCTGTTGGCTGAATCTTTGGCAATTAGAGAAGGTATGCGGTTGGTGATGAGGTTGGGGTTTCAAGGAGTCATGGTGGAGTCA
AACTCTTTGGAGGCCTTAAATTTGATTGGGGAGAAATCTCCATGGCAAGGAGAAGCAACAAATTGGATAGAAGATATTCATGTTCTCTCGGGCATTTCAGGAAATCACGT
TCTATCACGTTTTCAGGGAATCTAA
Protein sequenceShow/hide protein sequence
MTMRYNLLSHSSSNCNNKAWWKRFSKILIPPKIKVFMWKVELVDYALVRCLRSRQWVGNHGSDMYEKADIVAAMVDVHTVLNPLLAESLAIREGMRLVMRLGFQGVMVES
NSLEALNLIGEKSPWQGEATNWIEDIHVLSGISGNHVLSRFQGI