; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g30220 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g30220
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionZinc finger, CCHC-type
Genome locationchr9:22756312..22757212
RNA-Seq ExpressionMoc09g30220
SyntenyMoc09g30220
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON91412.1 Zinc finger, CCHC-type, partial [Trema orientale]2.9e-1931.09Show/hide
Query:  SSSEVWKGVEDYFGNVNTSQINQLRYTLQHTKKGSMKIGEYLGLRKQTAANINVAGEPISIKQLISYIISSLEDRDQIEVGHMGTTTTSIEEDETE---Q
        +S E+W  +E  F   + ++  QLR  LQ+ KKGS  I EY+   +  A ++  AG+PIS ++LI YI+  L    +  V ++ +   SI   E +   Q
Subjt:  SSSEVWKGVEDYFGNVNTSQINQLRYTLQHTKKGSMKIGEYLGLRKQTAANINVAGEPISIKQLISYIISSLEDRDQIEVGHMGTTTTSIEEDETE---Q

Query:  EEVVRIT-------------------------------PNQLAKFVG-----------------SGKYDHSTAYCNHRFEKEFMGSSSNNTTTNNNKL-Q
         + +R+                                P     + G                  GK  H    C HRF+  F G SS+++T   N+  Q
Subjt:  EEVVRIT-------------------------------PNQLAKFVG-----------------SGKYDHSTAYCNHRFEKEFMGSSSNNTTTNNNKL-Q

Query:  ALVFGPEVVTDPMWYADSGATNHNTLEVGNLNQRAEYNGNELLAVGNSDLLRIKHVGNSNILPHTTL
        A V     V D  WY DSGATNH T ++ NL  +A+Y G E LAVGN   L I H+G+S IL    L
Subjt:  ALVFGPEVVTDPMWYADSGATNHNTLEVGNLNQRAEYNGNELLAVGNSDLLRIKHVGNSNILPHTTL

XP_022142770.1 uncharacterized protein LOC111012809 [Momordica charantia]3.3e-2331.47Show/hide
Query:  MQSTVASSFLEMTSSSEVWKGVEDYFGNVNTSQINQLRYTLQHTKKGSMKIGEYLGLRKQTAANINVAGEPISIKQLIS-----------YIISSLEDRD
        M   +A   L M +S +VWK +ED +   N ++INQL+ +LQ T+K  +K+ +YL   KQ A  + +AGEPIS   L+S            II  +  ++
Subjt:  MQSTVASSFLEMTSSSEVWKGVEDYFGNVNTSQINQLRYTLQHTKKGSMKIGEYLGLRKQTAANINVAGEPISIKQLIS-----------YIISSLEDRD

Query:  QIEVGHMGTTTTSIEE------------------DETEQEEVVR-ITPNQL----------------AKFVGS------------GKYDHSTAYCNHRFE
         I    +  T  + E                   + T  + V +   P+Q                  +F G             GK  H    C HR  
Subjt:  QIEVGHMGTTTTSIEE------------------DETEQEEVVR-ITPNQL----------------AKFVGS------------GKYDHSTAYCNHRFE

Query:  KEFMGSSSNNTTTNNNKLQALVFGPEVVTDPMWYADSGATNHNTLEVGNLNQRAEYNGNELLAVGNSDLLRIKHVGNSNILPHTTL
         ++MG   N     N    A + GPEV+ DP W  DSGATNH T +  NL Q+AEY GNE L VGN   L I HVG++ I    T+
Subjt:  KEFMGSSSNNTTTNNNKLQALVFGPEVVTDPMWYADSGATNHNTLEVGNLNQRAEYNGNELLAVGNSDLLRIKHVGNSNILPHTTL

XP_022151683.1 uncharacterized protein LOC111019598 [Momordica charantia]1.0e-1627.61Show/hide
Query:  MQSTVASSFLEMTSSSEVWKGVEDYFGNVNTSQINQLRYTLQHTKKGSMKIGEYLGLRKQTAANINVAGEPISIKQLISYIISSL-EDRDQIEVGHMGTT
        M + VA   +  ++S E+W  V++ FG  + ++++ L+   Q T KGS+++ EYL L K  A N+ +AG  +S++ L+S +++ L E+ + I V   G  
Subjt:  MQSTVASSFLEMTSSSEVWKGVEDYFGNVNTSQINQLRYTLQHTKKGSMKIGEYLGLRKQTAANINVAGEPISIKQLISYIISSL-EDRDQIEVGHMGTT

Query:  TTS--------------------------IEEDETEQEEVVRITPNQLAKFVGSGKYDHST------AYCNHRF-------------EKEFMGSSSNNTT
          S                          I + +T     V     Q  +   +G   H +       Y    F              K F  S+S    
Subjt:  TTS--------------------------IEEDETEQEEVVRITPNQLAKFVGSGKYDHST------AYCNHRF-------------EKEFMGSSSNNTT

Query:  TNNNKLQALVFGPEVVTDPMWYADSGATNHNTLEVGNLNQRAEYNGNELLAVGNSDLLRIKHVGNSNI
           +     V  PE V DP WYADSGAT+H T    N+ Q+ +Y+G E + V N + L I H+G++NI
Subjt:  TNNNKLQALVFGPEVVTDPMWYADSGATNHNTLEVGNLNQRAEYNGNELLAVGNSDLLRIKHVGNSNI

XP_022157748.1 uncharacterized protein LOC111024384 isoform X1 [Momordica charantia]9.0e-2129.15Show/hide
Query:  MQSTVASSFLEMTSSSEVWKGVEDYFGNVNTSQINQLRYTLQHTKKGSMKIGEYLGLRKQTAANINVAGEPISIKQLISYIISSL-----------EDRD
        M  ++A   ++  SS EVWK +ED +G  + ++INQLR  LQ+TKK S+K+ EYLGL KQ + ++ +AGEP++   L+S ++S L           E +D
Subjt:  MQSTVASSFLEMTSSSEVWKGVEDYFGNVNTSQINQLRYTLQHTKKGSMKIGEYLGLRKQTAANINVAGEPISIKQLISYIISSL-----------EDRD

Query:  QIEVGHMGTTTTSIEEDETEQEEVVRITPNQLA-----------KFVGS-------------------------------------------------GK
              +  T  + E        V   T   ++             VG+                                                 GK
Subjt:  QIEVGHMGTTTTSIEEDETEQEEVVRITPNQLA-----------KFVGS-------------------------------------------------GK

Query:  YDHSTAYCNHRFEKEFMGSSSNNTTTNNNKLQALVFGPEVVTDPMWYADSGATNHNTLEVGNLNQRAEYNG
        Y H  A C  RF++ F    +N +++NNN+  A +  PE+V +P W ADSGAT+H T ++ NLN +++YNG
Subjt:  YDHSTAYCNHRFEKEFMGSSSNNTTTNNNKLQALVFGPEVVTDPMWYADSGATNHNTLEVGNLNQRAEYNG

XP_022157750.1 uncharacterized protein LOC111024384 isoform X2 [Momordica charantia]9.0e-2129.15Show/hide
Query:  MQSTVASSFLEMTSSSEVWKGVEDYFGNVNTSQINQLRYTLQHTKKGSMKIGEYLGLRKQTAANINVAGEPISIKQLISYIISSL-----------EDRD
        M  ++A   ++  SS EVWK +ED +G  + ++INQLR  LQ+TKK S+K+ EYLGL KQ + ++ +AGEP++   L+S ++S L           E +D
Subjt:  MQSTVASSFLEMTSSSEVWKGVEDYFGNVNTSQINQLRYTLQHTKKGSMKIGEYLGLRKQTAANINVAGEPISIKQLISYIISSL-----------EDRD

Query:  QIEVGHMGTTTTSIEEDETEQEEVVRITPNQLA-----------KFVGS-------------------------------------------------GK
              +  T  + E        V   T   ++             VG+                                                 GK
Subjt:  QIEVGHMGTTTTSIEEDETEQEEVVRITPNQLA-----------KFVGS-------------------------------------------------GK

Query:  YDHSTAYCNHRFEKEFMGSSSNNTTTNNNKLQALVFGPEVVTDPMWYADSGATNHNTLEVGNLNQRAEYNG
        Y H  A C  RF++ F    +N +++NNN+  A +  PE+V +P W ADSGAT+H T ++ NLN +++YNG
Subjt:  YDHSTAYCNHRFEKEFMGSSSNNTTTNNNKLQALVFGPEVVTDPMWYADSGATNHNTLEVGNLNQRAEYNG

TrEMBL top hitse value%identityAlignment
A0A6J1CLV9 uncharacterized protein LOC1110128091.6e-2331.47Show/hide
Query:  MQSTVASSFLEMTSSSEVWKGVEDYFGNVNTSQINQLRYTLQHTKKGSMKIGEYLGLRKQTAANINVAGEPISIKQLIS-----------YIISSLEDRD
        M   +A   L M +S +VWK +ED +   N ++INQL+ +LQ T+K  +K+ +YL   KQ A  + +AGEPIS   L+S            II  +  ++
Subjt:  MQSTVASSFLEMTSSSEVWKGVEDYFGNVNTSQINQLRYTLQHTKKGSMKIGEYLGLRKQTAANINVAGEPISIKQLIS-----------YIISSLEDRD

Query:  QIEVGHMGTTTTSIEE------------------DETEQEEVVR-ITPNQL----------------AKFVGS------------GKYDHSTAYCNHRFE
         I    +  T  + E                   + T  + V +   P+Q                  +F G             GK  H    C HR  
Subjt:  QIEVGHMGTTTTSIEE------------------DETEQEEVVR-ITPNQL----------------AKFVGS------------GKYDHSTAYCNHRFE

Query:  KEFMGSSSNNTTTNNNKLQALVFGPEVVTDPMWYADSGATNHNTLEVGNLNQRAEYNGNELLAVGNSDLLRIKHVGNSNILPHTTL
         ++MG   N     N    A + GPEV+ DP W  DSGATNH T +  NL Q+AEY GNE L VGN   L I HVG++ I    T+
Subjt:  KEFMGSSSNNTTTNNNKLQALVFGPEVVTDPMWYADSGATNHNTLEVGNLNQRAEYNGNELLAVGNSDLLRIKHVGNSNILPHTTL

A0A6J1DTZ7 uncharacterized protein LOC111024384 isoform X24.3e-2129.15Show/hide
Query:  MQSTVASSFLEMTSSSEVWKGVEDYFGNVNTSQINQLRYTLQHTKKGSMKIGEYLGLRKQTAANINVAGEPISIKQLISYIISSL-----------EDRD
        M  ++A   ++  SS EVWK +ED +G  + ++INQLR  LQ+TKK S+K+ EYLGL KQ + ++ +AGEP++   L+S ++S L           E +D
Subjt:  MQSTVASSFLEMTSSSEVWKGVEDYFGNVNTSQINQLRYTLQHTKKGSMKIGEYLGLRKQTAANINVAGEPISIKQLISYIISSL-----------EDRD

Query:  QIEVGHMGTTTTSIEEDETEQEEVVRITPNQLA-----------KFVGS-------------------------------------------------GK
              +  T  + E        V   T   ++             VG+                                                 GK
Subjt:  QIEVGHMGTTTTSIEEDETEQEEVVRITPNQLA-----------KFVGS-------------------------------------------------GK

Query:  YDHSTAYCNHRFEKEFMGSSSNNTTTNNNKLQALVFGPEVVTDPMWYADSGATNHNTLEVGNLNQRAEYNG
        Y H  A C  RF++ F    +N +++NNN+  A +  PE+V +P W ADSGAT+H T ++ NLN +++YNG
Subjt:  YDHSTAYCNHRFEKEFMGSSSNNTTTNNNKLQALVFGPEVVTDPMWYADSGATNHNTLEVGNLNQRAEYNG

A0A6J1DU77 uncharacterized protein LOC111024384 isoform X14.3e-2129.15Show/hide
Query:  MQSTVASSFLEMTSSSEVWKGVEDYFGNVNTSQINQLRYTLQHTKKGSMKIGEYLGLRKQTAANINVAGEPISIKQLISYIISSL-----------EDRD
        M  ++A   ++  SS EVWK +ED +G  + ++INQLR  LQ+TKK S+K+ EYLGL KQ + ++ +AGEP++   L+S ++S L           E +D
Subjt:  MQSTVASSFLEMTSSSEVWKGVEDYFGNVNTSQINQLRYTLQHTKKGSMKIGEYLGLRKQTAANINVAGEPISIKQLISYIISSL-----------EDRD

Query:  QIEVGHMGTTTTSIEEDETEQEEVVRITPNQLA-----------KFVGS-------------------------------------------------GK
              +  T  + E        V   T   ++             VG+                                                 GK
Subjt:  QIEVGHMGTTTTSIEEDETEQEEVVRITPNQLA-----------KFVGS-------------------------------------------------GK

Query:  YDHSTAYCNHRFEKEFMGSSSNNTTTNNNKLQALVFGPEVVTDPMWYADSGATNHNTLEVGNLNQRAEYNG
        Y H  A C  RF++ F    +N +++NNN+  A +  PE+V +P W ADSGAT+H T ++ NLN +++YNG
Subjt:  YDHSTAYCNHRFEKEFMGSSSNNTTTNNNKLQALVFGPEVVTDPMWYADSGATNHNTLEVGNLNQRAEYNG

A0A803PHM7 Uncharacterized protein8.2e-2030.99Show/hide
Query:  MQSTVASSFLEMTSSSEVWKGVEDYFGNVNTSQINQLRYTLQHTKKGSMKIGEYLGLRKQTAANINVAGEPI-----------SIKQLISYIISSLEDR-
        M  ++A+  +   +S+++W  +E  FG    S++++ R  +Q  +KGSM +  +L  +KQ A  + +AG+P            ++KQ +SY   + +   
Subjt:  MQSTVASSFLEMTSSSEVWKGVEDYFGNVNTSQINQLRYTLQHTKKGSMKIGEYLGLRKQTAANINVAGEPI-----------SIKQLISYIISSLEDR-

Query:  -------DQIEVGHMGTTTTSIEEDETEQEEVVRITPNQLAKFVGSGKYDHSTAYCNHRFEKEFMGSSSNNTTTNNNK----LQALVFGPEVVTDPMWYA
                    G  GT           +    R  P    +    G+Y HS AYC +R+ + FMG++    T ++NK      A V  PE++ D  WYA
Subjt:  -------DQIEVGHMGTTTTSIEEDETEQEEVVRITPNQLAKFVGSGKYDHSTAYCNHRFEKEFMGSSSNNTTTNNNK----LQALVFGPEVVTDPMWYA

Query:  DSGATNHNTLEVGNLNQRAEYNGNELLAVGNSDLLRIKHVGN
        DSGA+NH T E  NLNQ+ +YNG + L VG+ + L IKH+G+
Subjt:  DSGATNHNTLEVGNLNQRAEYNGNELLAVGNSDLLRIKHVGN

A0A803QD97 Uncharacterized protein1.3e-2028.17Show/hide
Query:  MQSTVASSFLEMTSSSEVWKGVEDYFGNVNTSQINQLRYTLQHTKKGSMKIGEYLGLRKQTAANINVAGEPISIKQLISYIISSLEDR---DQIEVGHMG
        M   +A+  +  +SS+E+W  +E  FG  + +++++ R  +Q  +KGSM + +YL  +KQ +  + +AG+P     L+S ++S L+       +++    
Subjt:  MQSTVASSFLEMTSSSEVWKGVEDYFGNVNTSQINQLRYTLQHTKKGSMKIGEYLGLRKQTAANINVAGEPISIKQLISYIISSLEDR---DQIEVGHMG

Query:  TTTTSIEED-----ETEQEEVVRITPN-----------QLAKFVGS------------------------------------------GKYDHSTAYCNH
         TT  + +D     +++ + +  ++ N            LA   GS                                          G+Y HS AYC +
Subjt:  TTTTSIEED-----ETEQEEVVRITPN-----------QLAKFVGS------------------------------------------GKYDHSTAYCNH

Query:  RFEKEFMGSSSNNTTTNNNK----LQALVFGPEVVTDPMWYADSGATNHNTLEVGNLNQRAEYNGNELLAVGNSDLLRIKHVGN
        RF++ FMG++    T +NNK      A V  PE++ D  WYA+SGA+NH T E  NLNQ+ +YNG + L VG+   L IKH G+
Subjt:  RFEKEFMGSSSNNTTTNNNK----LQALVFGPEVVTDPMWYADSGATNHNTLEVGNLNQRAEYNGNELLAVGNSDLLRIKHVGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCAACAGTAGCAAGTTCCTTCCTTGAAATGACCTCCTCCTCTGAAGTTTGGAAGGGCGTTGAAGACTATTTTGGTAATGTTAACACATCACAGATCAACCAACT
AAGGTACACTCTTCAACATACTAAAAAGGGGTCCATGAAAATAGGAGAATATCTTGGGCTTAGGAAACAAACTGCTGCAAATATTAATGTTGCTGGTGAACCCATTTCCA
TTAAGCAACTTATTTCATATATTATCTCTAGTCTTGAGGACAGGGATCAAATAGAGGTCGGTCATATGGGAACTACAACAACTTCAATAGAGGAGGATGAAACCGAGCAA
GAGGAGGTTGTTCGAATAACTCCAAACCAACTTGCCAAGTTTGTGGGAAGTGGGAAGTATGATCATTCTACCGCCTACTGTAATCATCGATTTGAGAAAGAGTTCATGGG
TTCTTCGAGCAATAACACCACTACAAACAACAACAAACTACAAGCACTTGTTTTCGGTCCAGAAGTTGTTACTGATCCTATGTGGTATGCAGATTCAGGTGCAACGAACC
ACAACACACTAGAGGTTGGGAATCTAAATCAACGGGCTGAATATAATGGTAATGAGCTACTTGCAGTAGGTAATAGTGATCTTTTAAGAATTAAGCATGTTGGTAACTCT
AACATCTTACCTCACACCACCCTAGCACACTGCTATACCTACACAACATACTTCATGTTCCTGACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGTCAACAGTAGCAAGTTCCTTCCTTGAAATGACCTCCTCCTCTGAAGTTTGGAAGGGCGTTGAAGACTATTTTGGTAATGTTAACACATCACAGATCAACCAACT
AAGGTACACTCTTCAACATACTAAAAAGGGGTCCATGAAAATAGGAGAATATCTTGGGCTTAGGAAACAAACTGCTGCAAATATTAATGTTGCTGGTGAACCCATTTCCA
TTAAGCAACTTATTTCATATATTATCTCTAGTCTTGAGGACAGGGATCAAATAGAGGTCGGTCATATGGGAACTACAACAACTTCAATAGAGGAGGATGAAACCGAGCAA
GAGGAGGTTGTTCGAATAACTCCAAACCAACTTGCCAAGTTTGTGGGAAGTGGGAAGTATGATCATTCTACCGCCTACTGTAATCATCGATTTGAGAAAGAGTTCATGGG
TTCTTCGAGCAATAACACCACTACAAACAACAACAAACTACAAGCACTTGTTTTCGGTCCAGAAGTTGTTACTGATCCTATGTGGTATGCAGATTCAGGTGCAACGAACC
ACAACACACTAGAGGTTGGGAATCTAAATCAACGGGCTGAATATAATGGTAATGAGCTACTTGCAGTAGGTAATAGTGATCTTTTAAGAATTAAGCATGTTGGTAACTCT
AACATCTTACCTCACACCACCCTAGCACACTGCTATACCTACACAACATACTTCATGTTCCTGACTTAA
Protein sequenceShow/hide protein sequence
MQSTVASSFLEMTSSSEVWKGVEDYFGNVNTSQINQLRYTLQHTKKGSMKIGEYLGLRKQTAANINVAGEPISIKQLISYIISSLEDRDQIEVGHMGTTTTSIEEDETEQ
EEVVRITPNQLAKFVGSGKYDHSTAYCNHRFEKEFMGSSSNNTTTNNNKLQALVFGPEVVTDPMWYADSGATNHNTLEVGNLNQRAEYNGNELLAVGNSDLLRIKHVGNS
NILPHTTLAHCYTYTTYFMFLT