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Moc09g30400 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g30400
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022231
Genome locationchr9:22900676..22901175
RNA-Seq ExpressionMoc09g30400
SyntenyMoc09g30400
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147190.1 uncharacterized protein LOC111016201 [Momordica charantia]2.0e-2388.73Show/hide
Query:  GLFKIARSPAPHRTYRTRHRARLMMEDQKAEQEKTRKDIEELRKKLDAIVLALEKGKATADPATSSNLVHE
        GLFKIARS APHRTYRTR RARLMMEDQKAEQEKTRKDIEELR+KLD I+LALEKGK+ ADPATSSN VHE
Subjt:  GLFKIARSPAPHRTYRTRHRARLMMEDQKAEQEKTRKDIEELRKKLDAIVLALEKGKATADPATSSNLVHE

XP_022149382.1 uncharacterized protein LOC111017812 [Momordica charantia]4.7e-0978.72Show/hide
Query:  MEDQKAEQEKTRKDIEELRKKLDAIVLALEKGKATADPATSSNLVHE
        M+DQKAEQEK RKDIEELR+KLD I+LALEKGK  ADP TSSN VH+
Subjt:  MEDQKAEQEKTRKDIEELRKKLDAIVLALEKGKATADPATSSNLVHE

XP_022155098.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica charantia]1.1e-0568.75Show/hide
Query:  MMEDQKAEQEKTRKDIEELRKKLDAIVLALEKGKATADPATSSNLVHE
        M +D+K+EQEKTRKDIEELR+KLDAI+LALEKGK  A+   +SN +HE
Subjt:  MMEDQKAEQEKTRKDIEELRKKLDAIVLALEKGKATADPATSSNLVHE

XP_022157796.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]5.0e-1187.23Show/hide
Query:  MEDQKAEQEKTRKDIEELRKKLDAIVLALEKGKATADPATSSNLVHE
        MEDQKAEQEKTRKDIEELR+KLD I L LEKGKATADPATSSN +HE
Subjt:  MEDQKAEQEKTRKDIEELRKKLDAIVLALEKGKATADPATSSNLVHE

TrEMBL top hitse value%identityAlignment
A0A6J1CZG4 uncharacterized protein LOC1110162019.5e-2488.73Show/hide
Query:  GLFKIARSPAPHRTYRTRHRARLMMEDQKAEQEKTRKDIEELRKKLDAIVLALEKGKATADPATSSNLVHE
        GLFKIARS APHRTYRTR RARLMMEDQKAEQEKTRKDIEELR+KLD I+LALEKGK+ ADPATSSN VHE
Subjt:  GLFKIARSPAPHRTYRTRHRARLMMEDQKAEQEKTRKDIEELRKKLDAIVLALEKGKATADPATSSNLVHE

A0A6J1D7T3 uncharacterized protein LOC1110178122.3e-0978.72Show/hide
Query:  MEDQKAEQEKTRKDIEELRKKLDAIVLALEKGKATADPATSSNLVHE
        M+DQKAEQEK RKDIEELR+KLD I+LALEKGK  ADP TSSN VH+
Subjt:  MEDQKAEQEKTRKDIEELRKKLDAIVLALEKGKATADPATSSNLVHE

A0A6J1DM29 LOW QUALITY PROTEIN: uncharacterized protein LOC1110222315.2e-0668.75Show/hide
Query:  MMEDQKAEQEKTRKDIEELRKKLDAIVLALEKGKATADPATSSNLVHE
        M +D+K+EQEKTRKDIEELR+KLDAI+LALEKGK  A+   +SN +HE
Subjt:  MMEDQKAEQEKTRKDIEELRKKLDAIVLALEKGKATADPATSSNLVHE

A0A6J1DZ90 Ribonuclease H2.4e-1187.23Show/hide
Query:  MEDQKAEQEKTRKDIEELRKKLDAIVLALEKGKATADPATSSNLVHE
        MEDQKAEQEKTRKDIEELR+KLD I L LEKGKATADPATSSN +HE
Subjt:  MEDQKAEQEKTRKDIEELRKKLDAIVLALEKGKATADPATSSNLVHE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCTGCCATTGCCCCTACACAGCCGAATGGCAAAAGCACACTCAAGTTCTTGGGCAAACTTCGGCGAGATCTAGAGCATTGGGGACAGTTTTATTGACACTCTGCTT
TAATGGATTGTTCAAGATAGCTCGCTCACCGGCACCACATCGCACTTACCGTACCAGACACAGGGCAAGATTAATGATGGAAGATCAAAAAGCTGAGCAGGAGAAAACAA
GGAAAGATATTGAGGAGTTGCGCAAAAAGTTAGATGCTATCGTCCTTGCGTTGGAAAAAGGAAAAGCGACTGCAGATCCTGCTACATCTAGCAACCTTGTCCATGAGCTG
TAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCTGCCATTGCCCCTACACAGCCGAATGGCAAAAGCACACTCAAGTTCTTGGGCAAACTTCGGCGAGATCTAGAGCATTGGGGACAGTTTTATTGACACTCTGCTT
TAATGGATTGTTCAAGATAGCTCGCTCACCGGCACCACATCGCACTTACCGTACCAGACACAGGGCAAGATTAATGATGGAAGATCAAAAAGCTGAGCAGGAGAAAACAA
GGAAAGATATTGAGGAGTTGCGCAAAAAGTTAGATGCTATCGTCCTTGCGTTGGAAAAAGGAAAAGCGACTGCAGATCCTGCTACATCTAGCAACCTTGTCCATGAGCTG
TAA
Protein sequenceShow/hide protein sequence
MVCHCPYTAEWQKHTQVLGQTSARSRALGTVLLTLCFNGLFKIARSPAPHRTYRTRHRARLMMEDQKAEQEKTRKDIEELRKKLDAIVLALEKGKATADPATSSNLVHEL