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Moc09g30450 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g30450
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr9:22941497..22942617
RNA-Seq ExpressionMoc09g30450
SyntenyMoc09g30450
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151719.1 uncharacterized protein LOC111019634 [Momordica charantia]1.7e-4770.07Show/hide
Query:  DYSRQEDDLRKVLIEKTKNSASKGADVSPSCSEKNSDLKTQSRYNPLTPEGVITREEFDLMKNKFDAQVEAFTAKCEKKENPFDDGDIDESPFTLEILEA
        +Y+ Q  DLR+ L  K  +S  KG   SPSCS +NS+ + +S YNP+TPEGVITREEFD +K+KFDAQVEA  AKCEKKE+ FDDGD+ ESPFT +ILEA
Subjt:  DYSRQEDDLRKVLIEKTKNSASKGADVSPSCSEKNSDLKTQSRYNPLTPEGVITREEFDLMKNKFDAQVEAFTAKCEKKENPFDDGDIDESPFTLEILEA

Query:  LIPPKFKTRTVKPYDESKDLKDYVEVFEGLMDFQAAYDAIKCRAFQI
        LIP KFKT T+KPYD SKD KDYVEVFEGLMDFQAA DAIKCR FQI
Subjt:  LIPPKFKTRTVKPYDESKDLKDYVEVFEGLMDFQAAYDAIKCRAFQI

XP_022155128.1 uncharacterized protein LOC111022267 [Momordica charantia]9.6e-4365.31Show/hide
Query:  DYSRQEDDLRKVLIEKTKNSASKGADVSPSCSEKNSDLKTQSRYNPLTPEGVITREEFDLMKNKFDAQVEAFTAKCEKKENPFDDGDIDESPFTLEILEA
        +Y+ Q  DLR+ L  K  +S  KG   SPS S +NS+ + +S YNP+TP+ VITREEFD +K+KFDAQVEA  A CEKKE+ FDDGD+ E PFTL+ILEA
Subjt:  DYSRQEDDLRKVLIEKTKNSASKGADVSPSCSEKNSDLKTQSRYNPLTPEGVITREEFDLMKNKFDAQVEAFTAKCEKKENPFDDGDIDESPFTLEILEA

Query:  LIPPKFKTRTVKPYDESKDLKDYVEVFEGLMDFQAAYDAIKCRAFQI
         I PKFKT T+KPYD SK+ KDYV+VFEGLM+FQAA DAIKCRAFQI
Subjt:  LIPPKFKTRTVKPYDESKDLKDYVEVFEGLMDFQAAYDAIKCRAFQI

XP_022155139.1 uncharacterized protein LOC111022280 [Momordica charantia]7.8e-4562.65Show/hide
Query:  PPLHPDDDNVNVGDNGRVDYSRQEDDLRKVLIEKTKNSASKGAD-VSPSCSEKNSDLKTQSRYNPLTPEGVITREEFDLMKNKFDAQVEAFTAKCEKKEN
        P + P +      D G VDYS +++DLRK L +K K ++ +  D +S S    NS+LK QS+Y PL PE VI REEFDLMK++FD QVEA  A+CEKKE+
Subjt:  PPLHPDDDNVNVGDNGRVDYSRQEDDLRKVLIEKTKNSASKGAD-VSPSCSEKNSDLKTQSRYNPLTPEGVITREEFDLMKNKFDAQVEAFTAKCEKKEN

Query:  PFDDGDIDESPFTLEILEALIPPKFKTRTVKPYDESKDLKDYVEVFEGLMDFQAAYDAIKCRAFQI
        PFDD D+ ESPFT +I+EA IPPKFKT T+KPYD SKD KDYVEVFEGLMDFQAA DAIKC AFQI
Subjt:  PFDDGDIDESPFTLEILEALIPPKFKTRTVKPYDESKDLKDYVEVFEGLMDFQAAYDAIKCRAFQI

XP_022157897.1 uncharacterized protein LOC111024503 [Momordica charantia]1.1e-4172.87Show/hide
Query:  ASKGADVSPSCSEK--NSDLKTQSRYNPLTPEGVITREEFDLMKNKFDAQVEAFTAKCEKKENPFDDGDIDESPFTLEILEALIPPKFKTRTVKPYDESK
        AS+ ++ SPS S +  NSD K QS+Y PLTPE VITREEFDLMK++FD QVEA  AKCEKKE  FDDGD+ ESPFT +ILE  IPPKFKT T+K YD SK
Subjt:  ASKGADVSPSCSEK--NSDLKTQSRYNPLTPEGVITREEFDLMKNKFDAQVEAFTAKCEKKENPFDDGDIDESPFTLEILEALIPPKFKTRTVKPYDESK

Query:  DLKDYVEVFEGLMDFQAAYDAIKCRAFQI
        D KDYVEVFEGLMDFQAA DAIKC AFQI
Subjt:  DLKDYVEVFEGLMDFQAAYDAIKCRAFQI

XP_022159327.1 uncharacterized protein LOC111025738 [Momordica charantia]6.2e-4267.13Show/hide
Query:  QEDDLRKVLIEKTKNSASKGADVSPSCSEKNSDLKTQSRYNPLTPEGVITREEFDLMKNKFDAQVEAFTAKCEKKENPFDDGDIDESPFTLEILEALIPP
        +  DLR  L  K  +S  KG   SPSCS KNS+ + +S YNP+ PEGVITREEFD +K+KFDAQVE   A+CE K + FDDGD+ ESPFT +ILEALIP 
Subjt:  QEDDLRKVLIEKTKNSASKGADVSPSCSEKNSDLKTQSRYNPLTPEGVITREEFDLMKNKFDAQVEAFTAKCEKKENPFDDGDIDESPFTLEILEALIPP

Query:  KFKTRTVKPYDESKDLKDYVEVFEGLMDFQAAYDAIKCRAFQI
        KFKT T+KPYD SKD KDYVEVFEGLM FQAA DAIK RAFQI
Subjt:  KFKTRTVKPYDESKDLKDYVEVFEGLMDFQAAYDAIKCRAFQI

TrEMBL top hitse value%identityAlignment
A0A6J1DDW5 uncharacterized protein LOC1110196348.2e-4870.07Show/hide
Query:  DYSRQEDDLRKVLIEKTKNSASKGADVSPSCSEKNSDLKTQSRYNPLTPEGVITREEFDLMKNKFDAQVEAFTAKCEKKENPFDDGDIDESPFTLEILEA
        +Y+ Q  DLR+ L  K  +S  KG   SPSCS +NS+ + +S YNP+TPEGVITREEFD +K+KFDAQVEA  AKCEKKE+ FDDGD+ ESPFT +ILEA
Subjt:  DYSRQEDDLRKVLIEKTKNSASKGADVSPSCSEKNSDLKTQSRYNPLTPEGVITREEFDLMKNKFDAQVEAFTAKCEKKENPFDDGDIDESPFTLEILEA

Query:  LIPPKFKTRTVKPYDESKDLKDYVEVFEGLMDFQAAYDAIKCRAFQI
        LIP KFKT T+KPYD SKD KDYVEVFEGLMDFQAA DAIKCR FQI
Subjt:  LIPPKFKTRTVKPYDESKDLKDYVEVFEGLMDFQAAYDAIKCRAFQI

A0A6J1DM55 uncharacterized protein LOC1110222674.6e-4365.31Show/hide
Query:  DYSRQEDDLRKVLIEKTKNSASKGADVSPSCSEKNSDLKTQSRYNPLTPEGVITREEFDLMKNKFDAQVEAFTAKCEKKENPFDDGDIDESPFTLEILEA
        +Y+ Q  DLR+ L  K  +S  KG   SPS S +NS+ + +S YNP+TP+ VITREEFD +K+KFDAQVEA  A CEKKE+ FDDGD+ E PFTL+ILEA
Subjt:  DYSRQEDDLRKVLIEKTKNSASKGADVSPSCSEKNSDLKTQSRYNPLTPEGVITREEFDLMKNKFDAQVEAFTAKCEKKENPFDDGDIDESPFTLEILEA

Query:  LIPPKFKTRTVKPYDESKDLKDYVEVFEGLMDFQAAYDAIKCRAFQI
         I PKFKT T+KPYD SK+ KDYV+VFEGLM+FQAA DAIKCRAFQI
Subjt:  LIPPKFKTRTVKPYDESKDLKDYVEVFEGLMDFQAAYDAIKCRAFQI

A0A6J1DPC9 uncharacterized protein LOC1110222803.8e-4562.65Show/hide
Query:  PPLHPDDDNVNVGDNGRVDYSRQEDDLRKVLIEKTKNSASKGAD-VSPSCSEKNSDLKTQSRYNPLTPEGVITREEFDLMKNKFDAQVEAFTAKCEKKEN
        P + P +      D G VDYS +++DLRK L +K K ++ +  D +S S    NS+LK QS+Y PL PE VI REEFDLMK++FD QVEA  A+CEKKE+
Subjt:  PPLHPDDDNVNVGDNGRVDYSRQEDDLRKVLIEKTKNSASKGAD-VSPSCSEKNSDLKTQSRYNPLTPEGVITREEFDLMKNKFDAQVEAFTAKCEKKEN

Query:  PFDDGDIDESPFTLEILEALIPPKFKTRTVKPYDESKDLKDYVEVFEGLMDFQAAYDAIKCRAFQI
        PFDD D+ ESPFT +I+EA IPPKFKT T+KPYD SKD KDYVEVFEGLMDFQAA DAIKC AFQI
Subjt:  PFDDGDIDESPFTLEILEALIPPKFKTRTVKPYDESKDLKDYVEVFEGLMDFQAAYDAIKCRAFQI

A0A6J1DVR0 uncharacterized protein LOC1110245035.1e-4272.87Show/hide
Query:  ASKGADVSPSCSEK--NSDLKTQSRYNPLTPEGVITREEFDLMKNKFDAQVEAFTAKCEKKENPFDDGDIDESPFTLEILEALIPPKFKTRTVKPYDESK
        AS+ ++ SPS S +  NSD K QS+Y PLTPE VITREEFDLMK++FD QVEA  AKCEKKE  FDDGD+ ESPFT +ILE  IPPKFKT T+K YD SK
Subjt:  ASKGADVSPSCSEK--NSDLKTQSRYNPLTPEGVITREEFDLMKNKFDAQVEAFTAKCEKKENPFDDGDIDESPFTLEILEALIPPKFKTRTVKPYDESK

Query:  DLKDYVEVFEGLMDFQAAYDAIKCRAFQI
        D KDYVEVFEGLMDFQAA DAIKC AFQI
Subjt:  DLKDYVEVFEGLMDFQAAYDAIKCRAFQI

A0A6J1DZJ1 uncharacterized protein LOC1110257383.0e-4267.13Show/hide
Query:  QEDDLRKVLIEKTKNSASKGADVSPSCSEKNSDLKTQSRYNPLTPEGVITREEFDLMKNKFDAQVEAFTAKCEKKENPFDDGDIDESPFTLEILEALIPP
        +  DLR  L  K  +S  KG   SPSCS KNS+ + +S YNP+ PEGVITREEFD +K+KFDAQVE   A+CE K + FDDGD+ ESPFT +ILEALIP 
Subjt:  QEDDLRKVLIEKTKNSASKGADVSPSCSEKNSDLKTQSRYNPLTPEGVITREEFDLMKNKFDAQVEAFTAKCEKKENPFDDGDIDESPFTLEILEALIPP

Query:  KFKTRTVKPYDESKDLKDYVEVFEGLMDFQAAYDAIKCRAFQI
        KFKT T+KPYD SKD KDYVEVFEGLM FQAA DAIK RAFQI
Subjt:  KFKTRTVKPYDESKDLKDYVEVFEGLMDFQAAYDAIKCRAFQI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTATATAATATCAAAAAAGTGCCATATGAGGATAGTGGTTCGCTAAAAGAAATATCCCCATTTGAATTTTCAGGCAGGTCCATCTCGGCACCTTCCGAGGTGGAAGA
CTTGGTCATTATTTTTCTTATCAAAACCGCCAATGTTAAGGATAAACTGCCCGGGTTCGATCTACTCAACCCGACAGGTATCGAATTTCTCCTCGAACTTAATATTGAGT
CAGAGCTGCTTACTAACTTGAACGACGGAGATTTTGCCTCTTATGCTGGTCTTCCCGTTGTGTTCCAAGTCGGAGCTAGGACCGAGTTCGAGCTTGACCAAGGTGATCAA
GATCCTCCCCTTCATCCTGATGATGATAACGTGAATGTCGGGGATAACGGAAGGGTCGACTATAGCCGTCAAGAGGACGACCTGAGGAAAGTCCTCATCGAGAAAACAAA
GAACTCCGCCTCAAAGGGCGCGGATGTTTCACCTTCGTGCTCCGAGAAAAACTCAGACTTGAAAACCCAATCTCGATATAACCCATTAACACCCGAAGGGGTGATCACAA
GGGAAGAATTCGACCTGATGAAGAACAAGTTCGATGCACAGGTCGAGGCATTTACGGCGAAGTGCGAGAAGAAAGAGAACCCGTTTGATGATGGCGATATAGACGAGTCG
CCATTCACTTTGGAAATTTTGGAGGCGCTCATTCCTCCTAAGTTCAAGACGCGCACTGTGAAGCCCTATGATGAGTCTAAAGACCTAAAAGACTATGTTGAGGTCTTCGA
GGGCCTCATGGATTTTCAGGCGGCATATGACGCCATTAAATGCCGAGCATTCCAGATCGTTTGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTATATAATATCAAAAAAGTGCCATATGAGGATAGTGGTTCGCTAAAAGAAATATCCCCATTTGAATTTTCAGGCAGGTCCATCTCGGCACCTTCCGAGGTGGAAGA
CTTGGTCATTATTTTTCTTATCAAAACCGCCAATGTTAAGGATAAACTGCCCGGGTTCGATCTACTCAACCCGACAGGTATCGAATTTCTCCTCGAACTTAATATTGAGT
CAGAGCTGCTTACTAACTTGAACGACGGAGATTTTGCCTCTTATGCTGGTCTTCCCGTTGTGTTCCAAGTCGGAGCTAGGACCGAGTTCGAGCTTGACCAAGGTGATCAA
GATCCTCCCCTTCATCCTGATGATGATAACGTGAATGTCGGGGATAACGGAAGGGTCGACTATAGCCGTCAAGAGGACGACCTGAGGAAAGTCCTCATCGAGAAAACAAA
GAACTCCGCCTCAAAGGGCGCGGATGTTTCACCTTCGTGCTCCGAGAAAAACTCAGACTTGAAAACCCAATCTCGATATAACCCATTAACACCCGAAGGGGTGATCACAA
GGGAAGAATTCGACCTGATGAAGAACAAGTTCGATGCACAGGTCGAGGCATTTACGGCGAAGTGCGAGAAGAAAGAGAACCCGTTTGATGATGGCGATATAGACGAGTCG
CCATTCACTTTGGAAATTTTGGAGGCGCTCATTCCTCCTAAGTTCAAGACGCGCACTGTGAAGCCCTATGATGAGTCTAAAGACCTAAAAGACTATGTTGAGGTCTTCGA
GGGCCTCATGGATTTTCAGGCGGCATATGACGCCATTAAATGCCGAGCATTCCAGATCGTTTGCTAG
Protein sequenceShow/hide protein sequence
MVYNIKKVPYEDSGSLKEISPFEFSGRSISAPSEVEDLVIIFLIKTANVKDKLPGFDLLNPTGIEFLLELNIESELLTNLNDGDFASYAGLPVVFQVGARTEFELDQGDQ
DPPLHPDDDNVNVGDNGRVDYSRQEDDLRKVLIEKTKNSASKGADVSPSCSEKNSDLKTQSRYNPLTPEGVITREEFDLMKNKFDAQVEAFTAKCEKKENPFDDGDIDES
PFTLEILEALIPPKFKTRTVKPYDESKDLKDYVEVFEGLMDFQAAYDAIKCRAFQIVC