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Moc09g30470 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g30470
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr9:22943862..22947252
RNA-Seq ExpressionMoc09g30470
SyntenyMoc09g30470
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149985.1 uncharacterized protein LOC111018267 [Momordica charantia]5.2e-2971.43Show/hide
Query:  MAEFVVRNGRSAYNAIFRRSIIHSLQAIPSTLHQVMKYSTINGVGMVRGEQKTSRECYASVLKGSVVCALEEDATLSNRIVLLSEDKQPISNQREVDAPT
        MAEFVV NGRSAYNAIF R IIHS QA+PSTLHQV+KYST NGVG +RGEQKTSRECYAS LKGS VCALEE A  +   +L SE   P + +RE  AP 
Subjt:  MAEFVVRNGRSAYNAIFRRSIIHSLQAIPSTLHQVMKYSTINGVGMVRGEQKTSRECYASVLKGSVVCALEEDATLSNRIVLLSEDKQPISNQREVDAPT

Query:  EELEL
        EELEL
Subjt:  EELEL

XP_022150760.1 uncharacterized protein LOC111018823 [Momordica charantia]7.8e-2566.97Show/hide
Query:  MAEFVVRNGRSAYNAIFRRSIIHSLQAIPSTLHQVMKYSTINGVGMVRGEQKTSRECYASVLKGSVVCALE----EDATLSNRIVLLSEDKQPISNQREV
        MAEFVV +GRSAYNAIF R IIHS +AIPSTLHQV+KYST NGVGMVRGEQ  SRECYAS LKGS VCALE     D TL  +  L          +RE 
Subjt:  MAEFVVRNGRSAYNAIFRRSIIHSLQAIPSTLHQVMKYSTINGVGMVRGEQKTSRECYASVLKGSVVCALE----EDATLSNRIVLLSEDKQPISNQREV

Query:  DAPTEELEL
         APTEELEL
Subjt:  DAPTEELEL

XP_022152367.1 uncharacterized protein LOC111020111 [Momordica charantia]1.7e-2463.81Show/hide
Query:  MAEFVVRNGRSAYNAIFRRSIIHSLQAIPSTLHQVMKYSTINGVGMVRGEQKTSRECYASVLKGSVVCALEEDATLSNRIVLLSEDKQPISNQREVDAPT
        MAEFVV +GR AYNAIF R IIHS +A+PSTLHQV+KYST NGVG VRGEQKTSRECYAS LKGS VC LEE A         ++D  P   +R+     
Subjt:  MAEFVVRNGRSAYNAIFRRSIIHSLQAIPSTLHQVMKYSTINGVGMVRGEQKTSRECYASVLKGSVVCALEEDATLSNRIVLLSEDKQPISNQREVDAPT

Query:  EELEL
        EELEL
Subjt:  EELEL

XP_022154405.1 uncharacterized protein LOC111021682 [Momordica charantia]1.3e-2464.76Show/hide
Query:  MAEFVVRNGRSAYNAIFRRSIIHSLQAIPSTLHQVMKYSTINGVGMVRGEQKTSRECYASVLKGSVVCALEEDATLSNRIVLLSEDKQPISNQREVDAPT
        MAEFVV +GRSAYNAIF R IIHS + +PST+HQV+KYST NGVG VRGEQKT RECYAS LKGS VCAL +    +   +L SE   P   +R+  APT
Subjt:  MAEFVVRNGRSAYNAIFRRSIIHSLQAIPSTLHQVMKYSTINGVGMVRGEQKTSRECYASVLKGSVVCALEEDATLSNRIVLLSEDKQPISNQREVDAPT

Query:  EELEL
        EELEL
Subjt:  EELEL

XP_022158414.1 uncharacterized protein LOC111024904 [Momordica charantia]1.1e-2669.81Show/hide
Query:  MAEFVVRNGRSAYNAIFRRSIIHSLQAIPSTLHQVMKYSTINGVGMVRGEQKTSRECYASVLKGSVVCALEEDATLSNRIVLL-SEDKQPISNQREVDAP
        MAEFVV +GRSAYNAIF R IIHS +A+PSTLHQV+KYST N VGMVRGEQKTSRECYAS LKGS VCALEE    +NR  L  SE   P   +R+   P
Subjt:  MAEFVVRNGRSAYNAIFRRSIIHSLQAIPSTLHQVMKYSTINGVGMVRGEQKTSRECYASVLKGSVVCALEEDATLSNRIVLL-SEDKQPISNQREVDAP

Query:  TEELEL
        TEELEL
Subjt:  TEELEL

TrEMBL top hitse value%identityAlignment
A0A6J1D787 uncharacterized protein LOC1110182672.5e-2971.43Show/hide
Query:  MAEFVVRNGRSAYNAIFRRSIIHSLQAIPSTLHQVMKYSTINGVGMVRGEQKTSRECYASVLKGSVVCALEEDATLSNRIVLLSEDKQPISNQREVDAPT
        MAEFVV NGRSAYNAIF R IIHS QA+PSTLHQV+KYST NGVG +RGEQKTSRECYAS LKGS VCALEE A  +   +L SE   P + +RE  AP 
Subjt:  MAEFVVRNGRSAYNAIFRRSIIHSLQAIPSTLHQVMKYSTINGVGMVRGEQKTSRECYASVLKGSVVCALEEDATLSNRIVLLSEDKQPISNQREVDAPT

Query:  EELEL
        EELEL
Subjt:  EELEL

A0A6J1D9E1 uncharacterized protein LOC1110188233.8e-2566.97Show/hide
Query:  MAEFVVRNGRSAYNAIFRRSIIHSLQAIPSTLHQVMKYSTINGVGMVRGEQKTSRECYASVLKGSVVCALE----EDATLSNRIVLLSEDKQPISNQREV
        MAEFVV +GRSAYNAIF R IIHS +AIPSTLHQV+KYST NGVGMVRGEQ  SRECYAS LKGS VCALE     D TL  +  L          +RE 
Subjt:  MAEFVVRNGRSAYNAIFRRSIIHSLQAIPSTLHQVMKYSTINGVGMVRGEQKTSRECYASVLKGSVVCALE----EDATLSNRIVLLSEDKQPISNQREV

Query:  DAPTEELEL
         APTEELEL
Subjt:  DAPTEELEL

A0A6J1DJI4 uncharacterized protein LOC1110216826.4e-2564.76Show/hide
Query:  MAEFVVRNGRSAYNAIFRRSIIHSLQAIPSTLHQVMKYSTINGVGMVRGEQKTSRECYASVLKGSVVCALEEDATLSNRIVLLSEDKQPISNQREVDAPT
        MAEFVV +GRSAYNAIF R IIHS + +PST+HQV+KYST NGVG VRGEQKT RECYAS LKGS VCAL +    +   +L SE   P   +R+  APT
Subjt:  MAEFVVRNGRSAYNAIFRRSIIHSLQAIPSTLHQVMKYSTINGVGMVRGEQKTSRECYASVLKGSVVCALEEDATLSNRIVLLSEDKQPISNQREVDAPT

Query:  EELEL
        EELEL
Subjt:  EELEL

A0A6J1DYS0 Ribonuclease H8.4e-2565.71Show/hide
Query:  MAEFVVRNGRSAYNAIFRRSIIHSLQAIPSTLHQVMKYSTINGVGMVRGEQKTSRECYASVLKGSVVCALEEDATLSNRIVLLSEDKQPISNQREVDAPT
        MAEFVV +GRSAYNAIF R IIHS + +PSTLHQV+KYST NGVG VRGEQ  SRECYAS LKGS VCALE  A+  N  +    D      +RE  APT
Subjt:  MAEFVVRNGRSAYNAIFRRSIIHSLQAIPSTLHQVMKYSTINGVGMVRGEQKTSRECYASVLKGSVVCALEEDATLSNRIVLLSEDKQPISNQREVDAPT

Query:  EELEL
        EELEL
Subjt:  EELEL

A0A6J1DZB9 uncharacterized protein LOC1110249045.3e-2769.81Show/hide
Query:  MAEFVVRNGRSAYNAIFRRSIIHSLQAIPSTLHQVMKYSTINGVGMVRGEQKTSRECYASVLKGSVVCALEEDATLSNRIVLL-SEDKQPISNQREVDAP
        MAEFVV +GRSAYNAIF R IIHS +A+PSTLHQV+KYST N VGMVRGEQKTSRECYAS LKGS VCALEE    +NR  L  SE   P   +R+   P
Subjt:  MAEFVVRNGRSAYNAIFRRSIIHSLQAIPSTLHQVMKYSTINGVGMVRGEQKTSRECYASVLKGSVVCALEEDATLSNRIVLL-SEDKQPISNQREVDAP

Query:  TEELEL
        TEELEL
Subjt:  TEELEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGAGTTCGTGGTGAGAAACGGCAGATCAGCTTACAATGCCATCTTTAGACGATCAATCATCCACTCGCTTCAGGCCATTCCATCGACCCTTCACCAAGTT
ATGAAGTATTCAACTATCAATGGAGTTGGAATGGTCCGAGGTGAGCAGAAAACATCAAGGGAGTGCTATGCTTCAGTACTCAAAGGATCGGTAGTTTGTGCCTTA
GAAGAAGATGCAACTCTGTCTAATCGGATTGTCCTGCTTTCCGAGGACAAACAGCCCATAAGCAACCAGCGTGAAGTTGATGCACCTACTGAGGAGCTGGAACTT
GCTGGGAAGGACGATTCGAAGGTAAGGGCATATGTATATGTTGGCCGATCTCGAAGGGAAATTACTCTTACACCCATGGAATGCAGAACACCTAAAGCGCTATAT
CCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGAGTTCGTGGTGAGAAACGGCAGATCAGCTTACAATGCCATCTTTAGACGATCAATCATCCACTCGCTTCAGGCCATTCCATCGACCCTTCACCAAGTT
ATGAAGTATTCAACTATCAATGGAGTTGGAATGGTCCGAGGTGAGCAGAAAACATCAAGGGAGTGCTATGCTTCAGTACTCAAAGGATCGGTAGTTTGTGCCTTA
GAAGAAGATGCAACTCTGTCTAATCGGATTGTCCTGCTTTCCGAGGACAAACAGCCCATAAGCAACCAGCGTGAAGTTGATGCACCTACTGAGGAGCTGGAACTT
GCTGGGAAGGACGATTCGAAGGTAAGGGCATATGTATATGTTGGCCGATCTCGAAGGGAAATTACTCTTACACCCATGGAATGCAGAACACCTAAAGCGCTATAT
CCTTGA
Protein sequenceShow/hide protein sequence
MAEFVVRNGRSAYNAIFRRSIIHSLQAIPSTLHQVMKYSTINGVGMVRGEQKTSRECYASVLKGSVVCALEEDATLSNRIVLLSEDKQPISNQREVDAPTEELEL
AGKDDSKVRAYVYVGRSRREITLTPMECRTPKALYP