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Moc09g30540 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g30540
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr9:22978342..22979146
RNA-Seq ExpressionMoc09g30540
SyntenyMoc09g30540
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022137317.1 uncharacterized protein LOC111008813 [Momordica charantia]1.2e-2196.61Show/hide
Query:  VITREESDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPISPKFKAPT
        VITREE DQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPI PKFKAPT
Subjt:  VITREESDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPISPKFKAPT

XP_022141796.1 uncharacterized protein LOC111012081 [Momordica charantia]1.0e-2093.22Show/hide
Query:  VITREESDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPISPKFKAPT
        +ITREE DQLRGQLDAQ EALKAKCEQKEGPLNDGDLGESPFTSDVLEAPI PKFKAPT
Subjt:  VITREESDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPISPKFKAPT

XP_022151719.1 uncharacterized protein LOC111019634 [Momordica charantia]2.4e-2253.79Show/hide
Query:  AGSRSENRVTRVGIREQRGFPPRPSRGGTSRRTTRERGHTRQRGDLREHLNRNRGSSLRK------------------------DRVITREESDQLRGQL
        A SRSENRV R  + EQRG    P + G       E  +T QRGDLREHLNR R SSLRK                        + VITREE DQL+ + 
Subjt:  AGSRSENRVTRVGIREQRGFPPRPSRGGTSRRTTRERGHTRQRGDLREHLNRNRGSSLRK------------------------DRVITREESDQLRGQL

Query:  DAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPISPKFKAPT
        DAQVEALKAKCE+KE   +DGDLGESPFTSD+LEA I  KFK PT
Subjt:  DAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPISPKFKAPT

XP_022152854.1 uncharacterized protein LOC111020479 [Momordica charantia]3.9e-2039.9Show/hide
Query:  MVQPANSTNTADRRTLAASDFHQREVGVSGVEGQGHDGLATEPPPQVGTNHRACPTTCAPPRTFKATRGRGGTSKKGARGLAPAPTSAGSRSENRVTRVG
        MVQPANSTNTADRR LAA+  HQREVG   VEGQGH+ L TEP              C                 + AR   P    A            
Subjt:  MVQPANSTNTADRRTLAASDFHQREVGVSGVEGQGHDGLATEPPPQVGTNHRACPTTCAPPRTFKATRGRGGTSKKGARGLAPAPTSAGSRSENRVTRVG

Query:  IREQRGFPPRPSRGGTSRRTTRERGHTRQRGDLREHLNRNRGSSLRKDRVITREESDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPI
                P+PS+  +S                                VITREE DQL+ + DAQVEALKA+CE+KE   +DGDLGE  F+SD+LEA I
Subjt:  IREQRGFPPRPSRGGTSRRTTRERGHTRQRGDLREHLNRNRGSSLRKDRVITREESDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPI

Query:  SPKFKAPT
         PKFK PT
Subjt:  SPKFKAPT

XP_022159327.1 uncharacterized protein LOC111025738 [Momordica charantia]1.8e-3346.03Show/hide
Query:  MVQPANSTNTADRRTLAASDFHQREVGVSGVEGQGHDGLATEPPPQVGTNHRACPTTCAP--PRTFKATRGRGGTSKKGARGLAPAPT-----SAGSRSE
        MVQP +STNT DRR L A+D HQREVG   VEGQ H+GL TEP      + R      +P  P+ FKA RGRGG S++   G APAP+     +     E
Subjt:  MVQPANSTNTADRRTLAASDFHQREVGVSGVEGQGHDGLATEPPPQVGTNHRACPTTCAP--PRTFKATRGRGGTSKKGARGLAPAPT-----SAGSRSE

Query:  NRVTRVGIREQRGFPPRPSRGGTSRRTTRERGHTRQRGDLREHLNRNRGSSLRKDR------------------------VITREESDQLRGQLDAQVEA
           T++   E+       + G  SR  + +R    +RGDLR+HL+R R SSLRK R                        VITREE DQL+ + DAQVE 
Subjt:  NRVTRVGIREQRGFPPRPSRGGTSRRTTRERGHTRQRGDLREHLNRNRGSSLRKDR------------------------VITREESDQLRGQLDAQVEA

Query:  LKAKCEQKEGPLNDGDLGESPFTSDVLEAPISPKFKAPT
        LKA+CE K    +DGDLGESPFTSD+LEA I  KFK PT
Subjt:  LKAKCEQKEGPLNDGDLGESPFTSDVLEAPISPKFKAPT

TrEMBL top hitse value%identityAlignment
A0A6J1C7X5 uncharacterized protein LOC1110088135.9e-2296.61Show/hide
Query:  VITREESDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPISPKFKAPT
        VITREE DQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPI PKFKAPT
Subjt:  VITREESDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPISPKFKAPT

A0A6J1CKB3 uncharacterized protein LOC1110120815.0e-2193.22Show/hide
Query:  VITREESDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPISPKFKAPT
        +ITREE DQLRGQLDAQ EALKAKCEQKEGPLNDGDLGESPFTSDVLEAPI PKFKAPT
Subjt:  VITREESDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPISPKFKAPT

A0A6J1DDW5 uncharacterized protein LOC1110196341.2e-2253.79Show/hide
Query:  AGSRSENRVTRVGIREQRGFPPRPSRGGTSRRTTRERGHTRQRGDLREHLNRNRGSSLRK------------------------DRVITREESDQLRGQL
        A SRSENRV R  + EQRG    P + G       E  +T QRGDLREHLNR R SSLRK                        + VITREE DQL+ + 
Subjt:  AGSRSENRVTRVGIREQRGFPPRPSRGGTSRRTTRERGHTRQRGDLREHLNRNRGSSLRK------------------------DRVITREESDQLRGQL

Query:  DAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPISPKFKAPT
        DAQVEALKAKCE+KE   +DGDLGESPFTSD+LEA I  KFK PT
Subjt:  DAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPISPKFKAPT

A0A6J1DHB3 uncharacterized protein LOC1110204791.9e-2039.9Show/hide
Query:  MVQPANSTNTADRRTLAASDFHQREVGVSGVEGQGHDGLATEPPPQVGTNHRACPTTCAPPRTFKATRGRGGTSKKGARGLAPAPTSAGSRSENRVTRVG
        MVQPANSTNTADRR LAA+  HQREVG   VEGQGH+ L TEP              C                 + AR   P    A            
Subjt:  MVQPANSTNTADRRTLAASDFHQREVGVSGVEGQGHDGLATEPPPQVGTNHRACPTTCAPPRTFKATRGRGGTSKKGARGLAPAPTSAGSRSENRVTRVG

Query:  IREQRGFPPRPSRGGTSRRTTRERGHTRQRGDLREHLNRNRGSSLRKDRVITREESDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPI
                P+PS+  +S                                VITREE DQL+ + DAQVEALKA+CE+KE   +DGDLGE  F+SD+LEA I
Subjt:  IREQRGFPPRPSRGGTSRRTTRERGHTRQRGDLREHLNRNRGSSLRKDRVITREESDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPI

Query:  SPKFKAPT
         PKFK PT
Subjt:  SPKFKAPT

A0A6J1DZJ1 uncharacterized protein LOC1110257388.7e-3446.03Show/hide
Query:  MVQPANSTNTADRRTLAASDFHQREVGVSGVEGQGHDGLATEPPPQVGTNHRACPTTCAP--PRTFKATRGRGGTSKKGARGLAPAPT-----SAGSRSE
        MVQP +STNT DRR L A+D HQREVG   VEGQ H+GL TEP      + R      +P  P+ FKA RGRGG S++   G APAP+     +     E
Subjt:  MVQPANSTNTADRRTLAASDFHQREVGVSGVEGQGHDGLATEPPPQVGTNHRACPTTCAP--PRTFKATRGRGGTSKKGARGLAPAPT-----SAGSRSE

Query:  NRVTRVGIREQRGFPPRPSRGGTSRRTTRERGHTRQRGDLREHLNRNRGSSLRKDR------------------------VITREESDQLRGQLDAQVEA
           T++   E+       + G  SR  + +R    +RGDLR+HL+R R SSLRK R                        VITREE DQL+ + DAQVE 
Subjt:  NRVTRVGIREQRGFPPRPSRGGTSRRTTRERGHTRQRGDLREHLNRNRGSSLRKDR------------------------VITREESDQLRGQLDAQVEA

Query:  LKAKCEQKEGPLNDGDLGESPFTSDVLEAPISPKFKAPT
        LKA+CE K    +DGDLGESPFTSD+LEA I  KFK PT
Subjt:  LKAKCEQKEGPLNDGDLGESPFTSDVLEAPISPKFKAPT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCAACCAGCAAACTCGACCAATACGGCAGATCGAAGGACTCTAGCTGCCAGTGATTTCCACCAGAGGGAGGTCGGAGTCAGTGGTGTAGAGGGGCAAGGT
CACGACGGCCTAGCAACAGAACCCCCTCCGCAAGTCGGCACAAATCACCGCGCCTGTCCTACCACCTGCGCACCCCCAAGGACATTCAAGGCCACCCGTGGCCGA
GGTGGAACCTCTAAGAAGGGCGCCCGGGGTCTAGCCCCGGCCCCGACAAGCGCAGGGTCCCGATCTGAGAACCGAGTGACGCGCGTTGGCATACGCGAGCAAAGG
GGGTTCCCACCTCGGCCCAGTCGAGGAGGAACATCCCGAAGGACAACGAGAGAGCGAGGACACACTCGCCAGAGAGGAGACCTCCGTGAACACCTCAACAGAAAC
AGAGGCTCATCTCTCCGAAAGGACAGAGTGATTACAAGGGAGGAGTCCGACCAGCTGAGGGGCCAGCTCGACGCTCAGGTGGAGGCCTTAAAGGCCAAATGTGAG
CAGAAGGAAGGTCCACTGAACGATGGCGACTTGGGAGAATCGCCCTTCACCTCGGACGTTTTGGAAGCACCGATCTCTCCGAAGTTCAAAGCTCCTACCCGTGAA
ACCTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCAACCAGCAAACTCGACCAATACGGCAGATCGAAGGACTCTAGCTGCCAGTGATTTCCACCAGAGGGAGGTCGGAGTCAGTGGTGTAGAGGGGCAAGGT
CACGACGGCCTAGCAACAGAACCCCCTCCGCAAGTCGGCACAAATCACCGCGCCTGTCCTACCACCTGCGCACCCCCAAGGACATTCAAGGCCACCCGTGGCCGA
GGTGGAACCTCTAAGAAGGGCGCCCGGGGTCTAGCCCCGGCCCCGACAAGCGCAGGGTCCCGATCTGAGAACCGAGTGACGCGCGTTGGCATACGCGAGCAAAGG
GGGTTCCCACCTCGGCCCAGTCGAGGAGGAACATCCCGAAGGACAACGAGAGAGCGAGGACACACTCGCCAGAGAGGAGACCTCCGTGAACACCTCAACAGAAAC
AGAGGCTCATCTCTCCGAAAGGACAGAGTGATTACAAGGGAGGAGTCCGACCAGCTGAGGGGCCAGCTCGACGCTCAGGTGGAGGCCTTAAAGGCCAAATGTGAG
CAGAAGGAAGGTCCACTGAACGATGGCGACTTGGGAGAATCGCCCTTCACCTCGGACGTTTTGGAAGCACCGATCTCTCCGAAGTTCAAAGCTCCTACCCGTGAA
ACCTTATGA
Protein sequenceShow/hide protein sequence
MVQPANSTNTADRRTLAASDFHQREVGVSGVEGQGHDGLATEPPPQVGTNHRACPTTCAPPRTFKATRGRGGTSKKGARGLAPAPTSAGSRSENRVTRVGIREQR
GFPPRPSRGGTSRRTTRERGHTRQRGDLREHLNRNRGSSLRKDRVITREESDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPISPKFKAPTRE
TL