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Moc09g30640 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g30640
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr9:23085725..23088387
RNA-Seq ExpressionMoc09g30640
SyntenyMoc09g30640
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156835.1 uncharacterized protein LOC111023669 [Momordica charantia]3.3e-1874.32Show/hide
Query:  EGGNNAGISNASAYLQKEGYSPSFLAEGQVTVQRSSEGSFTSLENLMKKYTEKNDTMVQSQATSLRNLEIQVGQ
        +GGNNAG SNA AY QKE Y P F  +GQVTVQ  SEGSF SLENLMKK  EKND  VQSQA SLRNLE+QVGQ
Subjt:  EGGNNAGISNASAYLQKEGYSPSFLAEGQVTVQRSSEGSFTSLENLMKKYTEKNDTMVQSQATSLRNLEIQVGQ

XP_022157438.1 uncharacterized protein LOC111024136 [Momordica charantia]7.1e-2153.91Show/hide
Query:  GVPIAADPEGGNNAGISNASAYLQKEGYSPSFLAEGQVTVQRSSEGSFTSLENLMKKYTEKNDTMVQSQATSLRNLEIQVGQLAIHLKSRPYGVLPSDTK
        G P ++  +GG+NAG SNA A+ QK                R SEGSF SLE LMK+Y   ND  V+ Q + LRNLE+QVGQLA  L SRP G LPSDT+
Subjt:  GVPIAADPEGGNNAGISNASAYLQKEGYSPSFLAEGQVTVQRSSEGSFTSLENLMKKYTEKNDTMVQSQATSLRNLEIQVGQLAIHLKSRPYGVLPSDTK

Query:  MPKRDGNEQCNALRL
        +PKRDG EQC AL L
Subjt:  MPKRDGNEQCNALRL

XP_022158598.1 uncharacterized protein LOC111025053 [Momordica charantia]6.0e-2862.62Show/hide
Query:  EGGNNAGISNASAYLQKEGYSPSFLAEGQVTVQRSSEGSFTSLENLMKKYTEKNDTMVQSQATSLRNLEIQVGQLAIHLKSRPYGVLPSDTKMPKRDGNE
        +GG+N GISNA  + QK  Y P F  +GQ+     S+GS TSLEN+MK+Y   ND  VQSQA SLRNLE+QVGQLA+ LKSRP G LPSDT++PKRD  E
Subjt:  EGGNNAGISNASAYLQKEGYSPSFLAEGQVTVQRSSEGSFTSLENLMKKYTEKNDTMVQSQATSLRNLEIQVGQLAIHLKSRPYGVLPSDTKMPKRDGNE

Query:  QCNALRL
        QCNAL L
Subjt:  QCNALRL

XP_022158740.1 uncharacterized protein LOC111025203 [Momordica charantia]5.4e-2158.42Show/hide
Query:  EGGNNAGISNASAYLQKEGYSPSFLAEGQVTVQRSSEGSFTSLENLMKKYTEKNDTMVQSQATSLRNLEIQVGQLAIHLKSRPYGVLPSDTKMPKRDGNE
        +G N+ G SNA AY QK  Y P    +GQ   Q+  +GSF SLENLMK+Y EKN+  VQS A SLRNLE+QVGQLA  LKSRPYG LPSDTK+ ++  + 
Subjt:  EGGNNAGISNASAYLQKEGYSPSFLAEGQVTVQRSSEGSFTSLENLMKKYTEKNDTMVQSQATSLRNLEIQVGQLAIHLKSRPYGVLPSDTKMPKRDGNE

Query:  Q
        Q
Subjt:  Q

XP_030509134.1 uncharacterized protein LOC115723804 [Cannabis sativa]4.7e-1750.47Show/hide
Query:  GGNNAGISNASAYLQKEGYSPSFLAEGQVTVQRSSEGSFT-SLENLMKKYTEKNDTMVQSQATSLRNLEIQVGQLAIHLKSRPYGVLPSDTKMPKRDGNE
        GG  A  S A     K+ + P F  + +       +GS T SLE+LM+ Y  KND ++QSQA SLRNLE+Q+GQLA  LK+RP G LPSDTK P+RDG E
Subjt:  GGNNAGISNASAYLQKEGYSPSFLAEGQVTVQRSSEGSFT-SLENLMKKYTEKNDTMVQSQATSLRNLEIQVGQLAIHLKSRPYGVLPSDTKMPKRDGNE

Query:  QCNALRL
         C A+ L
Subjt:  QCNALRL

TrEMBL top hitse value%identityAlignment
A0A6J1DRG1 uncharacterized protein LOC1110236691.6e-1874.32Show/hide
Query:  EGGNNAGISNASAYLQKEGYSPSFLAEGQVTVQRSSEGSFTSLENLMKKYTEKNDTMVQSQATSLRNLEIQVGQ
        +GGNNAG SNA AY QKE Y P F  +GQVTVQ  SEGSF SLENLMKK  EKND  VQSQA SLRNLE+QVGQ
Subjt:  EGGNNAGISNASAYLQKEGYSPSFLAEGQVTVQRSSEGSFTSLENLMKKYTEKNDTMVQSQATSLRNLEIQVGQ

A0A6J1DTD1 uncharacterized protein LOC1110241363.4e-2153.91Show/hide
Query:  GVPIAADPEGGNNAGISNASAYLQKEGYSPSFLAEGQVTVQRSSEGSFTSLENLMKKYTEKNDTMVQSQATSLRNLEIQVGQLAIHLKSRPYGVLPSDTK
        G P ++  +GG+NAG SNA A+ QK                R SEGSF SLE LMK+Y   ND  V+ Q + LRNLE+QVGQLA  L SRP G LPSDT+
Subjt:  GVPIAADPEGGNNAGISNASAYLQKEGYSPSFLAEGQVTVQRSSEGSFTSLENLMKKYTEKNDTMVQSQATSLRNLEIQVGQLAIHLKSRPYGVLPSDTK

Query:  MPKRDGNEQCNALRL
        +PKRDG EQC AL L
Subjt:  MPKRDGNEQCNALRL

A0A6J1DVS9 uncharacterized protein LOC1110245276.7e-1762.96Show/hide
Query:  GNNAGISNASAYLQKEGYSPSFLAEGQVTVQRSSEGSFTSLENLMKKYTEKNDTMVQSQATSLRNLEIQVGQLAIHLKSRP
        G+N G SNA A+ QK  Y P F  +GQ   Q+ SEGSF SLE LMK+Y   ND +VQSQA SLRNLE+QVGQLA  LKSRP
Subjt:  GNNAGISNASAYLQKEGYSPSFLAEGQVTVQRSSEGSFTSLENLMKKYTEKNDTMVQSQATSLRNLEIQVGQLAIHLKSRP

A0A6J1DWK1 uncharacterized protein LOC1110250532.9e-2862.62Show/hide
Query:  EGGNNAGISNASAYLQKEGYSPSFLAEGQVTVQRSSEGSFTSLENLMKKYTEKNDTMVQSQATSLRNLEIQVGQLAIHLKSRPYGVLPSDTKMPKRDGNE
        +GG+N GISNA  + QK  Y P F  +GQ+     S+GS TSLEN+MK+Y   ND  VQSQA SLRNLE+QVGQLA+ LKSRP G LPSDT++PKRD  E
Subjt:  EGGNNAGISNASAYLQKEGYSPSFLAEGQVTVQRSSEGSFTSLENLMKKYTEKNDTMVQSQATSLRNLEIQVGQLAIHLKSRPYGVLPSDTKMPKRDGNE

Query:  QCNALRL
        QCNAL L
Subjt:  QCNALRL

A0A6J1DWN2 uncharacterized protein LOC1110252032.6e-2158.42Show/hide
Query:  EGGNNAGISNASAYLQKEGYSPSFLAEGQVTVQRSSEGSFTSLENLMKKYTEKNDTMVQSQATSLRNLEIQVGQLAIHLKSRPYGVLPSDTKMPKRDGNE
        +G N+ G SNA AY QK  Y P    +GQ   Q+  +GSF SLENLMK+Y EKN+  VQS A SLRNLE+QVGQLA  LKSRPYG LPSDTK+ ++  + 
Subjt:  EGGNNAGISNASAYLQKEGYSPSFLAEGQVTVQRSSEGSFTSLENLMKKYTEKNDTMVQSQATSLRNLEIQVGQLAIHLKSRPYGVLPSDTKMPKRDGNE

Query:  Q
        Q
Subjt:  Q

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCACTGCGCAATAATAGCTCTGACACGAGATTTACAATGTTCGTACAACTTTCAGCTGGGTGCCTTAAAAACGTAACCCGATATAAAAGAGCAATTGGG
TCCCCTAATCATACCTACAACTTGTTTTCATTGCTTGGAAACCATAGCAACGGGAGTTGTGGGTATCCATGTTTGGGTGTCTCGGAAGGGAACCAAGTCGAGTTG
GGCACTAACGAATCTTTGTGCATGAACGATTTTGAGAGCTTGGAATATATTATCGACCACGAGATTGAACACACTTTCCATAGAAATCAAAGAGAACAAAGAAGA
ACCCAAGCTGAAACAAACATGAATCTGCCCAACCCACCTTTGCACCAACCTATTCCACCGAATGTGAGGATTGAGGAAATAGTAGATGGGGTTCCTATTGCTGCT
GACCCTGAGGGAGGAAATAATGCTGGTATATCTAATGCTTCAGCATATCTGCAAAAAGAAGGTTATTCCCCAAGCTTCTTAGCCGAAGGTCAGGTAACAGTGCAA
AGGTCATCTGAAGGATCATTCACATCTTTGGAGAATCTAATGAAGAAGTATACGGAAAAGAATGATACGATGGTGCAAAGTCAGGCAACATCGTTGAGGAATCTG
GAAATACAGGTGGGTCAATTGGCAATACATCTAAAGAGTAGGCCTTATGGAGTGCTGCCCAGTGATACTAAGATGCCCAAGAGAGATGGGAATGAACAATGTAAT
GCTCTGAGATTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCACTGCGCAATAATAGCTCTGACACGAGATTTACAATGTTCGTACAACTTTCAGCTGGGTGCCTTAAAAACGTAACCCGATATAAAAGAGCAATTGGG
TCCCCTAATCATACCTACAACTTGTTTTCATTGCTTGGAAACCATAGCAACGGGAGTTGTGGGTATCCATGTTTGGGTGTCTCGGAAGGGAACCAAGTCGAGTTG
GGCACTAACGAATCTTTGTGCATGAACGATTTTGAGAGCTTGGAATATATTATCGACCACGAGATTGAACACACTTTCCATAGAAATCAAAGAGAACAAAGAAGA
ACCCAAGCTGAAACAAACATGAATCTGCCCAACCCACCTTTGCACCAACCTATTCCACCGAATGTGAGGATTGAGGAAATAGTAGATGGGGTTCCTATTGCTGCT
GACCCTGAGGGAGGAAATAATGCTGGTATATCTAATGCTTCAGCATATCTGCAAAAAGAAGGTTATTCCCCAAGCTTCTTAGCCGAAGGTCAGGTAACAGTGCAA
AGGTCATCTGAAGGATCATTCACATCTTTGGAGAATCTAATGAAGAAGTATACGGAAAAGAATGATACGATGGTGCAAAGTCAGGCAACATCGTTGAGGAATCTG
GAAATACAGGTGGGTCAATTGGCAATACATCTAAAGAGTAGGCCTTATGGAGTGCTGCCCAGTGATACTAAGATGCCCAAGAGAGATGGGAATGAACAATGTAAT
GCTCTGAGATTGTAA
Protein sequenceShow/hide protein sequence
MDSLRNNSSDTRFTMFVQLSAGCLKNVTRYKRAIGSPNHTYNLFSLLGNHSNGSCGYPCLGVSEGNQVELGTNESLCMNDFESLEYIIDHEIEHTFHRNQREQRR
TQAETNMNLPNPPLHQPIPPNVRIEEIVDGVPIAADPEGGNNAGISNASAYLQKEGYSPSFLAEGQVTVQRSSEGSFTSLENLMKKYTEKNDTMVQSQATSLRNL
EIQVGQLAIHLKSRPYGVLPSDTKMPKRDGNEQCNALRL