; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g30730 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g30730
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionprotein FAR1-RELATED SEQUENCE 4-like
Genome locationchr9:23179498..23182879
RNA-Seq ExpressionMoc09g30730
SyntenyMoc09g30730
Gene Ontology termsGO:0006313 - transposition, DNA-mediated (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0004803 - transposase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022153146.1 uncharacterized protein LOC111020715 [Momordica charantia]1.3e-6195.35Show/hide
Query:  KMNLLAKFKVDAKALEELFLKAMKAYRESYFNSIWAQLGAYPGVGEYLDDIGKERWARCFQTELRYTQMTSNNAESVNALFRHARRLPVTALLDHIRGLL
        KMNLLAKFKVDAKALEELFLKA KAYRESYFNSIWAQLGAYPGV EYLDDIGKERWARCFQTELRYTQMTSNNAESVNALFRHAR+LPVTALLDHIRGLL
Subjt:  KMNLLAKFKVDAKALEELFLKAMKAYRESYFNSIWAQLGAYPGVGEYLDDIGKERWARCFQTELRYTQMTSNNAESVNALFRHARRLPVTALLDHIRGLL

Query:  QTWFYDRRTLASSRSTTLFDYVENKLAEY
        QTWFYDRRTLASSRSTTL  Y ENKLAEY
Subjt:  QTWFYDRRTLASSRSTTLFDYVENKLAEY

XP_022153146.1 uncharacterized protein LOC111020715 [Momordica charantia]1.9e-1561.22Show/hide
Query:  EEEDYEAEFVNDDYDDTLDEESEPDVE----------------------------------QSSGTNDVKEGEVFDTKKELSLRMHLVAMRLNFQFKM
        EE DYEAEFVNDDYDD LDEESEPDVE                                  QSSGTNDVKEGEVFDTKKELSLRMHLV MRLNFQFK+
Subjt:  EEEDYEAEFVNDDYDDTLDEESEPDVE----------------------------------QSSGTNDVKEGEVFDTKKELSLRMHLVAMRLNFQFKM

XP_022153146.1 uncharacterized protein LOC111020715 [Momordica charantia]3.8e-6193.8Show/hide
Query:  KMNLLAKFKVDAKALEELFLKAMKAYRESYFNSIWAQLGAYPGVGEYLDDIGKERWARCFQTELRYTQMTSNNAESVNALFRHARRLPVTALLDHIRGLL
        KMNLLAKFKVDAKA+EELFLKA KAYRESYFNSIWAQLGAYPG  EYLDDIGKERWA CFQTELRYTQMTSNNAESVNALFRH RRLPVTALLDHIRGLL
Subjt:  KMNLLAKFKVDAKALEELFLKAMKAYRESYFNSIWAQLGAYPGVGEYLDDIGKERWARCFQTELRYTQMTSNNAESVNALFRHARRLPVTALLDHIRGLL

Query:  QTWFYDRRTLASSRSTTLFDYVENKLAEY
        QTWFYDRRTLASSRSTTL DY ENKLAEY
Subjt:  QTWFYDRRTLASSRSTTLFDYVENKLAEY

XP_022154947.1 uncharacterized protein LOC111022090 [Momordica charantia]2.6e-7890.85Show/hide
Query:  MPRVFITFGGEWKDSEKDYVGGRTRGLTVDSTTTYREFLGQNVSSSCMPRTCIPPFQRPTDSIHSFPSSSLNPSSSQQPHPYYGHLGHDIAGLTPFESDV
        M RVFITFGGEWKDSEKDYV GRT+GLTVDSTTTYREF GQNV SSCMP TCIP FQRPTD I SFPSSS NPSSSQQPHPYY HLGHDIAGLTP ESDV
Subjt:  MPRVFITFGGEWKDSEKDYVGGRTRGLTVDSTTTYREFLGQNVSSSCMPRTCIPPFQRPTDSIHSFPSSSLNPSSSQQPHPYYGHLGHDIAGLTPFESDV

Query:  VPCNLGDDRVCDWNVSGLWNDNQDESDESYDPLGESEEEDYEAEFVNDDYDDTLDEESEPDVEQ
        VPCNLGDDRVCDWNV GLWNDNQDESDESYDPLGESEE DYEAEFVNDDYDD LDEESEPDVEQ
Subjt:  VPCNLGDDRVCDWNVSGLWNDNQDESDESYDPLGESEEEDYEAEFVNDDYDDTLDEESEPDVEQ

XP_022155970.1 uncharacterized protein LOC111022954 [Momordica charantia]7.4e-10547.01Show/hide
Query:  RVFITFGGEWKDSEKDYVGGRTRGLTVDSTTTYREFLGQNVSSSCMPRTCIPPFQRPTDSIHSFPSSSLNPSSSQQPHPYYGHLGHDIAGLTPFESDVVP
        RVFITFGGEW DSEKDYVGGR RGLTVDS         QNVSSSCMP  CIP FQRPTD I SFPSSS NPSSSQQPH YYGHLGHDIAGLTP ESDVVP
Subjt:  RVFITFGGEWKDSEKDYVGGRTRGLTVDSTTTYREFLGQNVSSSCMPRTCIPPFQRPTDSIHSFPSSSLNPSSSQQPHPYYGHLGHDIAGLTPFESDVVP

Query:  CNLGDDRVCDWNVSGLWNDNQDESDESYDPLGESEEEDYEAEFVNDDYDDTLDEESEPDVE----------------------------------QSSGT
        CNLGDDRVC WN+ GLWNDNQDESDESYD LG+SEE DYEAEF+NDDYDD  DE+ EPDVE                                  QSSGT
Subjt:  CNLGDDRVCDWNVSGLWNDNQDESDESYDPLGESEEEDYEAEFVNDDYDDTLDEESEPDVE----------------------------------QSSGT

Query:  NDVKEGEVFDTKKELSLRMHLVAMRLNFQFKM--------------------------------------------------------------------
        NDVKEG+VFDTKKELSLR HLVAM LNFQFK+                                                                    
Subjt:  NDVKEGEVFDTKKELSLRMHLVAMRLNFQFKM--------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------------------NLLAKFKVDAKALEELFLKAMKAYRESYFNSIWAQLGAYPGVGEYLDDIGKERWARCFQ
                                                 NLLAKFKVDAKALEELFLKA KAY+ESYFNSIWAQLGAYPG+ EYLDDIGKERW RCFQ
Subjt:  -----------------------------------------NLLAKFKVDAKALEELFLKAMKAYRESYFNSIWAQLGAYPGVGEYLDDIGKERWARCFQ

Query:  TELRYTQMTSNNAESVNALFRHARRLPVTALLDHIR
        TELRYTQMTSNNAESVNALFRHA  LPVTALLDHIR
Subjt:  TELRYTQMTSNNAESVNALFRHARRLPVTALLDHIR

XP_022158663.1 uncharacterized protein LOC111025125 [Momordica charantia]1.5e-6094.53Show/hide
Query:  MNLLAKFKVDAKALEELFLKAMKAYRESYFNSIWAQLGAYPGVGEYLDDIGKERWARCFQTELRYTQMTSNNAESVNALFRHARRLPVTALLDHIRGLLQ
        MNLLAKFKVDAKALEELFLKA KAYRESYFNSIWAQLGAYPGV EYLDDIGKERWARCFQTELRYTQ+TSNNAESVNALFRHA RLPVTALLDHIRGLLQ
Subjt:  MNLLAKFKVDAKALEELFLKAMKAYRESYFNSIWAQLGAYPGVGEYLDDIGKERWARCFQTELRYTQMTSNNAESVNALFRHARRLPVTALLDHIRGLLQ

Query:  TWFYDRRTLASSRSTTLFDYVENKLAEY
        TWFYDRRTLASS+STTL DY ENKLAEY
Subjt:  TWFYDRRTLASSRSTTLFDYVENKLAEY

TrEMBL top hitse value%identityAlignment
A0A6J1DJT1 uncharacterized protein LOC1110207156.4e-6295.35Show/hide
Query:  KMNLLAKFKVDAKALEELFLKAMKAYRESYFNSIWAQLGAYPGVGEYLDDIGKERWARCFQTELRYTQMTSNNAESVNALFRHARRLPVTALLDHIRGLL
        KMNLLAKFKVDAKALEELFLKA KAYRESYFNSIWAQLGAYPGV EYLDDIGKERWARCFQTELRYTQMTSNNAESVNALFRHAR+LPVTALLDHIRGLL
Subjt:  KMNLLAKFKVDAKALEELFLKAMKAYRESYFNSIWAQLGAYPGVGEYLDDIGKERWARCFQTELRYTQMTSNNAESVNALFRHARRLPVTALLDHIRGLL

Query:  QTWFYDRRTLASSRSTTLFDYVENKLAEY
        QTWFYDRRTLASSRSTTL  Y ENKLAEY
Subjt:  QTWFYDRRTLASSRSTTLFDYVENKLAEY

A0A6J1DJT1 uncharacterized protein LOC1110207159.0e-1661.22Show/hide
Query:  EEEDYEAEFVNDDYDDTLDEESEPDVE----------------------------------QSSGTNDVKEGEVFDTKKELSLRMHLVAMRLNFQFKM
        EE DYEAEFVNDDYDD LDEESEPDVE                                  QSSGTNDVKEGEVFDTKKELSLRMHLV MRLNFQFK+
Subjt:  EEEDYEAEFVNDDYDDTLDEESEPDVE----------------------------------QSSGTNDVKEGEVFDTKKELSLRMHLVAMRLNFQFKM

A0A6J1DJT1 uncharacterized protein LOC1110207151.9e-6193.8Show/hide
Query:  KMNLLAKFKVDAKALEELFLKAMKAYRESYFNSIWAQLGAYPGVGEYLDDIGKERWARCFQTELRYTQMTSNNAESVNALFRHARRLPVTALLDHIRGLL
        KMNLLAKFKVDAKA+EELFLKA KAYRESYFNSIWAQLGAYPG  EYLDDIGKERWA CFQTELRYTQMTSNNAESVNALFRH RRLPVTALLDHIRGLL
Subjt:  KMNLLAKFKVDAKALEELFLKAMKAYRESYFNSIWAQLGAYPGVGEYLDDIGKERWARCFQTELRYTQMTSNNAESVNALFRHARRLPVTALLDHIRGLL

Query:  QTWFYDRRTLASSRSTTLFDYVENKLAEY
        QTWFYDRRTLASSRSTTL DY ENKLAEY
Subjt:  QTWFYDRRTLASSRSTTLFDYVENKLAEY

A0A6J1DN26 uncharacterized protein LOC1110220901.3e-7890.85Show/hide
Query:  MPRVFITFGGEWKDSEKDYVGGRTRGLTVDSTTTYREFLGQNVSSSCMPRTCIPPFQRPTDSIHSFPSSSLNPSSSQQPHPYYGHLGHDIAGLTPFESDV
        M RVFITFGGEWKDSEKDYV GRT+GLTVDSTTTYREF GQNV SSCMP TCIP FQRPTD I SFPSSS NPSSSQQPHPYY HLGHDIAGLTP ESDV
Subjt:  MPRVFITFGGEWKDSEKDYVGGRTRGLTVDSTTTYREFLGQNVSSSCMPRTCIPPFQRPTDSIHSFPSSSLNPSSSQQPHPYYGHLGHDIAGLTPFESDV

Query:  VPCNLGDDRVCDWNVSGLWNDNQDESDESYDPLGESEEEDYEAEFVNDDYDDTLDEESEPDVEQ
        VPCNLGDDRVCDWNV GLWNDNQDESDESYDPLGESEE DYEAEFVNDDYDD LDEESEPDVEQ
Subjt:  VPCNLGDDRVCDWNVSGLWNDNQDESDESYDPLGESEEEDYEAEFVNDDYDDTLDEESEPDVEQ

A0A6J1DP00 uncharacterized protein LOC1110229543.6e-10547.01Show/hide
Query:  RVFITFGGEWKDSEKDYVGGRTRGLTVDSTTTYREFLGQNVSSSCMPRTCIPPFQRPTDSIHSFPSSSLNPSSSQQPHPYYGHLGHDIAGLTPFESDVVP
        RVFITFGGEW DSEKDYVGGR RGLTVDS         QNVSSSCMP  CIP FQRPTD I SFPSSS NPSSSQQPH YYGHLGHDIAGLTP ESDVVP
Subjt:  RVFITFGGEWKDSEKDYVGGRTRGLTVDSTTTYREFLGQNVSSSCMPRTCIPPFQRPTDSIHSFPSSSLNPSSSQQPHPYYGHLGHDIAGLTPFESDVVP

Query:  CNLGDDRVCDWNVSGLWNDNQDESDESYDPLGESEEEDYEAEFVNDDYDDTLDEESEPDVE----------------------------------QSSGT
        CNLGDDRVC WN+ GLWNDNQDESDESYD LG+SEE DYEAEF+NDDYDD  DE+ EPDVE                                  QSSGT
Subjt:  CNLGDDRVCDWNVSGLWNDNQDESDESYDPLGESEEEDYEAEFVNDDYDDTLDEESEPDVE----------------------------------QSSGT

Query:  NDVKEGEVFDTKKELSLRMHLVAMRLNFQFKM--------------------------------------------------------------------
        NDVKEG+VFDTKKELSLR HLVAM LNFQFK+                                                                    
Subjt:  NDVKEGEVFDTKKELSLRMHLVAMRLNFQFKM--------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------------------NLLAKFKVDAKALEELFLKAMKAYRESYFNSIWAQLGAYPGVGEYLDDIGKERWARCFQ
                                                 NLLAKFKVDAKALEELFLKA KAY+ESYFNSIWAQLGAYPG+ EYLDDIGKERW RCFQ
Subjt:  -----------------------------------------NLLAKFKVDAKALEELFLKAMKAYRESYFNSIWAQLGAYPGVGEYLDDIGKERWARCFQ

Query:  TELRYTQMTSNNAESVNALFRHARRLPVTALLDHIR
        TELRYTQMTSNNAESVNALFRHA  LPVTALLDHIR
Subjt:  TELRYTQMTSNNAESVNALFRHARRLPVTALLDHIR

A0A6J1DWR5 uncharacterized protein LOC1110251257.1e-6194.53Show/hide
Query:  MNLLAKFKVDAKALEELFLKAMKAYRESYFNSIWAQLGAYPGVGEYLDDIGKERWARCFQTELRYTQMTSNNAESVNALFRHARRLPVTALLDHIRGLLQ
        MNLLAKFKVDAKALEELFLKA KAYRESYFNSIWAQLGAYPGV EYLDDIGKERWARCFQTELRYTQ+TSNNAESVNALFRHA RLPVTALLDHIRGLLQ
Subjt:  MNLLAKFKVDAKALEELFLKAMKAYRESYFNSIWAQLGAYPGVGEYLDDIGKERWARCFQTELRYTQMTSNNAESVNALFRHARRLPVTALLDHIRGLLQ

Query:  TWFYDRRTLASSRSTTLFDYVENKLAEY
        TWFYDRRTLASS+STTL DY ENKLAEY
Subjt:  TWFYDRRTLASSRSTTLFDYVENKLAEY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAATGTGAGTGGATCTCTAAGTATGTGTCTTCTTTCAGGAACGCTCAGGCCCTTCATTGCAAATTGCTCCTTCTTTGCCGCAAAGTTGGAACCCCCGCCTCAGGA
TTTCATTAAGGTATCTGTTGATGCCGCATGCAATGGTCAAATTCAATCAACGGGGCTAGGTATTCTCCTTCGTGACAGTTGCAGGCGAATTATTGCAGCTTATTTGACTT
TCATTCCAATTCCTTTTTCTCCCATTCTCGCTGAAGTTAGGGCAATTTATGAAGGTCTGCGTCTGGCTCTTGCCTTGTATTATTGTAATATTCAGGTGGAGTCTGATTGC
TCAACTGCTATCAAGCTTATTCGTGGAGATATTTCTTCAATTGGAGATGAGCTTAACTGGGTGTTGGATGGTGATATTCCCACATTTGCGGGGGAAATTGAGGGTTCACC
AATAGTTCAATCCCGGATCGAAAGATGGTTCAGGAGTGAACCGGGATACATCCCGGACCAATCTCGAAGCACTGTAGTCTGGGATATGTCTCGGACCAAGACTAGTCCGG
GACGGATGCCTCGTGTTTTCATAACATTTGGTGGAGAATGGAAAGATAGTGAAAAAGATTACGTTGGTGGTCGCACGAGAGGATTGACAGTGGATAGTACAACCACGTAC
AGAGAATTTCTAGGCCAAAACGTGTCCTCGAGTTGTATGCCCAGAACTTGTATTCCCCCATTCCAGAGACCCACAGATTCGATACATTCATTTCCTTCCTCATCATTGAA
CCCCTCTTCTTCCCAACAACCACACCCATATTACGGGCATTTAGGTCATGATATAGCGGGTTTAACACCATTTGAATCAGATGTTGTTCCATGTAACCTAGGAGATGACA
GGGTATGTGATTGGAATGTGTCAGGATTATGGAATGATAATCAAGATGAAAGTGATGAATCATATGACCCATTGGGAGAGTCAGAAGAAGAAGACTATGAAGCAGAATTT
GTGAATGATGACTATGACGATACACTTGATGAAGAGTCTGAGCCCGATGTGGAACAGTCTTCTGGAACAAATGATGTTAAGGAGGGCGAAGTATTTGATACAAAGAAGGA
GTTGAGTTTGAGAATGCATTTAGTTGCAATGCGGCTGAATTTTCAGTTTAAAATGAACTTGTTAGCAAAATTTAAAGTCGATGCGAAGGCACTCGAGGAACTATTTCTAA
AAGCTATGAAAGCATATCGAGAGTCTTATTTCAACTCAATCTGGGCTCAACTTGGTGCATACCCTGGTGTGGGGGAGTATCTGGATGACATTGGGAAGGAGCGTTGGGCT
CGTTGTTTCCAAACAGAATTGAGGTACACACAGATGACCAGTAATAATGCGGAGTCCGTGAATGCCCTCTTTAGACACGCGCGTAGGTTGCCAGTAACTGCTTTATTGGA
CCATATCAGAGGTCTGTTACAGACTTGGTTCTACGATCGACGAACGCTTGCCTCTTCCCGATCAACCACATTGTTCGACTACGTAGAAAATAAGCTTGCTGAATACCGGA
CAGTGCCAGGAGACACGTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGAATGTGAGTGGATCTCTAAGTATGTGTCTTCTTTCAGGAACGCTCAGGCCCTTCATTGCAAATTGCTCCTTCTTTGCCGCAAAGTTGGAACCCCCGCCTCAGGA
TTTCATTAAGGTATCTGTTGATGCCGCATGCAATGGTCAAATTCAATCAACGGGGCTAGGTATTCTCCTTCGTGACAGTTGCAGGCGAATTATTGCAGCTTATTTGACTT
TCATTCCAATTCCTTTTTCTCCCATTCTCGCTGAAGTTAGGGCAATTTATGAAGGTCTGCGTCTGGCTCTTGCCTTGTATTATTGTAATATTCAGGTGGAGTCTGATTGC
TCAACTGCTATCAAGCTTATTCGTGGAGATATTTCTTCAATTGGAGATGAGCTTAACTGGGTGTTGGATGGTGATATTCCCACATTTGCGGGGGAAATTGAGGGTTCACC
AATAGTTCAATCCCGGATCGAAAGATGGTTCAGGAGTGAACCGGGATACATCCCGGACCAATCTCGAAGCACTGTAGTCTGGGATATGTCTCGGACCAAGACTAGTCCGG
GACGGATGCCTCGTGTTTTCATAACATTTGGTGGAGAATGGAAAGATAGTGAAAAAGATTACGTTGGTGGTCGCACGAGAGGATTGACAGTGGATAGTACAACCACGTAC
AGAGAATTTCTAGGCCAAAACGTGTCCTCGAGTTGTATGCCCAGAACTTGTATTCCCCCATTCCAGAGACCCACAGATTCGATACATTCATTTCCTTCCTCATCATTGAA
CCCCTCTTCTTCCCAACAACCACACCCATATTACGGGCATTTAGGTCATGATATAGCGGGTTTAACACCATTTGAATCAGATGTTGTTCCATGTAACCTAGGAGATGACA
GGGTATGTGATTGGAATGTGTCAGGATTATGGAATGATAATCAAGATGAAAGTGATGAATCATATGACCCATTGGGAGAGTCAGAAGAAGAAGACTATGAAGCAGAATTT
GTGAATGATGACTATGACGATACACTTGATGAAGAGTCTGAGCCCGATGTGGAACAGTCTTCTGGAACAAATGATGTTAAGGAGGGCGAAGTATTTGATACAAAGAAGGA
GTTGAGTTTGAGAATGCATTTAGTTGCAATGCGGCTGAATTTTCAGTTTAAAATGAACTTGTTAGCAAAATTTAAAGTCGATGCGAAGGCACTCGAGGAACTATTTCTAA
AAGCTATGAAAGCATATCGAGAGTCTTATTTCAACTCAATCTGGGCTCAACTTGGTGCATACCCTGGTGTGGGGGAGTATCTGGATGACATTGGGAAGGAGCGTTGGGCT
CGTTGTTTCCAAACAGAATTGAGGTACACACAGATGACCAGTAATAATGCGGAGTCCGTGAATGCCCTCTTTAGACACGCGCGTAGGTTGCCAGTAACTGCTTTATTGGA
CCATATCAGAGGTCTGTTACAGACTTGGTTCTACGATCGACGAACGCTTGCCTCTTCCCGATCAACCACATTGTTCGACTACGTAGAAAATAAGCTTGCTGAATACCGGA
CAGTGCCAGGAGACACGTTGTAG
Protein sequenceShow/hide protein sequence
MLNVSGSLSMCLLSGTLRPFIANCSFFAAKLEPPPQDFIKVSVDAACNGQIQSTGLGILLRDSCRRIIAAYLTFIPIPFSPILAEVRAIYEGLRLALALYYCNIQVESDC
STAIKLIRGDISSIGDELNWVLDGDIPTFAGEIEGSPIVQSRIERWFRSEPGYIPDQSRSTVVWDMSRTKTSPGRMPRVFITFGGEWKDSEKDYVGGRTRGLTVDSTTTY
REFLGQNVSSSCMPRTCIPPFQRPTDSIHSFPSSSLNPSSSQQPHPYYGHLGHDIAGLTPFESDVVPCNLGDDRVCDWNVSGLWNDNQDESDESYDPLGESEEEDYEAEF
VNDDYDDTLDEESEPDVEQSSGTNDVKEGEVFDTKKELSLRMHLVAMRLNFQFKMNLLAKFKVDAKALEELFLKAMKAYRESYFNSIWAQLGAYPGVGEYLDDIGKERWA
RCFQTELRYTQMTSNNAESVNALFRHARRLPVTALLDHIRGLLQTWFYDRRTLASSRSTTLFDYVENKLAEYRTVPGDTL