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Moc09g30870 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g30870
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionprotein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationchr9:23314939..23315539
RNA-Seq ExpressionMoc09g30870
SyntenyMoc09g30870
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132646.1 uncharacterized protein LOC111005455 [Momordica charantia]2.7e-3183.33Show/hide
Query:  MTSNLAEFMNAVLVHARALPITALFENCRALLQQWFYERRTAASSRGTVLTEYAEIILKKEAERVRYHHVRPIDRFEFEVHDGTESEPSY
        MTSNLAE MNAVLVHARALPITALFENCRALLQQW YERRTAASSRGTVLTEYAEIILKKE ER RYHHVRPIDR+  E      +EP Y
Subjt:  MTSNLAEFMNAVLVHARALPITALFENCRALLQQWFYERRTAASSRGTVLTEYAEIILKKEAERVRYHHVRPIDRFEFEVHDGTESEPSY

XP_022147770.1 uncharacterized protein LOC111016625 [Momordica charantia]7.6e-3482.65Show/hide
Query:  MTSNLAEFMNAVLVHARALPITALFENCRALLQQWFYERRTAASSRGTVLTEYAEIILKKEAERVRYHHVRPIDRFEFEVHDGTESEPSYLVTPNPCT
        MTSNLAE MNAVLVHARALPIT LF NCRALLQQ FYER+TAASSRGTVLTEYAEIILKKEAER RYHHVRPIDRFEF+VHDGT S+ S  +    CT
Subjt:  MTSNLAEFMNAVLVHARALPITALFENCRALLQQWFYERRTAASSRGTVLTEYAEIILKKEAERVRYHHVRPIDRFEFEVHDGTESEPSYLVTPNPCT

XP_022154803.1 uncharacterized protein LOC111021969 [Momordica charantia]2.1e-3186.75Show/hide
Query:  MTSNLAEFMNAVLVHARALPITALFENCRALLQQWFYERRTAASSRGTVLTEYAEIILKKEAERVRYHHVRPIDRFEFEVHDG
        MTSNLAE MNAVLVHAR LPITALFENCR+LLQQWFY+RRTA SSRGT LTEYAE ILK+ AE+ RYHHVRPIDRFEFEVHDG
Subjt:  MTSNLAEFMNAVLVHARALPITALFENCRALLQQWFYERRTAASSRGTVLTEYAEIILKKEAERVRYHHVRPIDRFEFEVHDG

XP_022157237.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Momordica charantia]8.1e-3675.68Show/hide
Query:  MTSNLAEFMNAVLVHARALPITALFENCRALLQQWFYERRTAASSRGTVLTEYAEIILKKEAERVRYHHVRPIDRFEFEVHDGTESEPSYLVTPNPCTRS
        MTSNLAE MNAVLVHAR LPITA+FENCRALLQQWFYERRTAA S GTVLTEYAEIILKKEAER RYHHVRPIDRFEFEVHDGT S+ S  +    CT  
Subjt:  MTSNLAEFMNAVLVHARALPITALFENCRALLQQWFYERRTAASSRGTVLTEYAEIILKKEAERVRYHHVRPIDRFEFEVHDGTESEPSYLVTPNPCTRS

Query:  EMKKIGFYRMT
          K+  ++ +T
Subjt:  EMKKIGFYRMT

XP_022157875.1 uncharacterized protein LOC111024486 [Momordica charantia]3.8e-3386.67Show/hide
Query:  MTSNLAEFMNAVLVHARALPITALFENCRALLQQWFYERRTAASSRGTVLTEYAEIILKKEAERVRYHHVRPIDRFEFEVHDGTESEPSY
        MTSNLAE MNAVLVHARALPITALFENCRALLQQWFYERRTAASSRGTVLTEYAEIILKKEAERVRYHHVRPIDR++ E      +EP Y
Subjt:  MTSNLAEFMNAVLVHARALPITALFENCRALLQQWFYERRTAASSRGTVLTEYAEIILKKEAERVRYHHVRPIDRFEFEVHDGTESEPSY

TrEMBL top hitse value%identityAlignment
A0A6J1BSV3 uncharacterized protein LOC1110054551.3e-3183.33Show/hide
Query:  MTSNLAEFMNAVLVHARALPITALFENCRALLQQWFYERRTAASSRGTVLTEYAEIILKKEAERVRYHHVRPIDRFEFEVHDGTESEPSY
        MTSNLAE MNAVLVHARALPITALFENCRALLQQW YERRTAASSRGTVLTEYAEIILKKE ER RYHHVRPIDR+  E      +EP Y
Subjt:  MTSNLAEFMNAVLVHARALPITALFENCRALLQQWFYERRTAASSRGTVLTEYAEIILKKEAERVRYHHVRPIDRFEFEVHDGTESEPSY

A0A6J1D127 uncharacterized protein LOC1110166253.7e-3482.65Show/hide
Query:  MTSNLAEFMNAVLVHARALPITALFENCRALLQQWFYERRTAASSRGTVLTEYAEIILKKEAERVRYHHVRPIDRFEFEVHDGTESEPSYLVTPNPCT
        MTSNLAE MNAVLVHARALPIT LF NCRALLQQ FYER+TAASSRGTVLTEYAEIILKKEAER RYHHVRPIDRFEF+VHDGT S+ S  +    CT
Subjt:  MTSNLAEFMNAVLVHARALPITALFENCRALLQQWFYERRTAASSRGTVLTEYAEIILKKEAERVRYHHVRPIDRFEFEVHDGTESEPSYLVTPNPCT

A0A6J1DLB0 uncharacterized protein LOC1110219691.0e-3186.75Show/hide
Query:  MTSNLAEFMNAVLVHARALPITALFENCRALLQQWFYERRTAASSRGTVLTEYAEIILKKEAERVRYHHVRPIDRFEFEVHDG
        MTSNLAE MNAVLVHAR LPITALFENCR+LLQQWFY+RRTA SSRGT LTEYAE ILK+ AE+ RYHHVRPIDRFEFEVHDG
Subjt:  MTSNLAEFMNAVLVHARALPITALFENCRALLQQWFYERRTAASSRGTVLTEYAEIILKKEAERVRYHHVRPIDRFEFEVHDG

A0A6J1DU12 protein FAR-RED ELONGATED HYPOCOTYL 3-like3.9e-3675.68Show/hide
Query:  MTSNLAEFMNAVLVHARALPITALFENCRALLQQWFYERRTAASSRGTVLTEYAEIILKKEAERVRYHHVRPIDRFEFEVHDGTESEPSYLVTPNPCTRS
        MTSNLAE MNAVLVHAR LPITA+FENCRALLQQWFYERRTAA S GTVLTEYAEIILKKEAER RYHHVRPIDRFEFEVHDGT S+ S  +    CT  
Subjt:  MTSNLAEFMNAVLVHARALPITALFENCRALLQQWFYERRTAASSRGTVLTEYAEIILKKEAERVRYHHVRPIDRFEFEVHDGTESEPSYLVTPNPCTRS

Query:  EMKKIGFYRMT
          K+  ++ +T
Subjt:  EMKKIGFYRMT

A0A6J1DU86 uncharacterized protein LOC1110244861.8e-3386.67Show/hide
Query:  MTSNLAEFMNAVLVHARALPITALFENCRALLQQWFYERRTAASSRGTVLTEYAEIILKKEAERVRYHHVRPIDRFEFEVHDGTESEPSY
        MTSNLAE MNAVLVHARALPITALFENCRALLQQWFYERRTAASSRGTVLTEYAEIILKKEAERVRYHHVRPIDR++ E      +EP Y
Subjt:  MTSNLAEFMNAVLVHARALPITALFENCRALLQQWFYERRTAASSRGTVLTEYAEIILKKEAERVRYHHVRPIDRFEFEVHDGTESEPSY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCTCGAATCTTGCTGAGTTCATGAATGCGGTACTTGTTCATGCTCGTGCTTTGCCAATAACAGCTCTATTTGAAAATTGCCGAGCTCTACTACAACAATGGTTTTA
TGAGAGGCGGACAGCTGCCTCTAGTCGAGGAACAGTTCTTACTGAATATGCAGAAATTATTCTTAAAAAAGAGGCAGAACGAGTTCGATATCATCATGTCAGGCCAATTG
ATCGGTTCGAATTCGAAGTGCATGATGGTACTGAATCGGAACCCTCATACTTGGTTACGCCGAACCCGTGTACTCGTTCGGAGATGAAGAAGATTGGATTTTACCGGATG
ACTACGTGCCAAAGACGATTAAGCCACCAAAATTTGTTCATCGTGTTGGACGTCGCCAAACTACTAGAATACCATCGGCCGAGGAAGTCCAACAGGTACACAAATGCGAG
GAAACGTTGGACACAACCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACCTCGAATCTTGCTGAGTTCATGAATGCGGTACTTGTTCATGCTCGTGCTTTGCCAATAACAGCTCTATTTGAAAATTGCCGAGCTCTACTACAACAATGGTTTTA
TGAGAGGCGGACAGCTGCCTCTAGTCGAGGAACAGTTCTTACTGAATATGCAGAAATTATTCTTAAAAAAGAGGCAGAACGAGTTCGATATCATCATGTCAGGCCAATTG
ATCGGTTCGAATTCGAAGTGCATGATGGTACTGAATCGGAACCCTCATACTTGGTTACGCCGAACCCGTGTACTCGTTCGGAGATGAAGAAGATTGGATTTTACCGGATG
ACTACGTGCCAAAGACGATTAAGCCACCAAAATTTGTTCATCGTGTTGGACGTCGCCAAACTACTAGAATACCATCGGCCGAGGAAGTCCAACAGGTACACAAATGCGAG
GAAACGTTGGACACAACCGTAA
Protein sequenceShow/hide protein sequence
MTSNLAEFMNAVLVHARALPITALFENCRALLQQWFYERRTAASSRGTVLTEYAEIILKKEAERVRYHHVRPIDRFEFEVHDGTESEPSYLVTPNPCTRSEMKKIGFYRM
TTCQRRLSHQNLFIVLDVAKLLEYHRPRKSNRYTNARKRWTQP