; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g30910 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g30910
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionPoly(A)-specific ribonuclease
Genome locationchr9:23344089..23345159
RNA-Seq ExpressionMoc09g30910
SyntenyMoc09g30910
Gene Ontology termsGO:0006402 - mRNA catabolic process (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0043229 - intracellular organelle (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146384.1 putative CCR4-associated factor 1 homolog 8 [Momordica charantia]6.9e-10068.75Show/hide
Query:  MEKTI-RNSMPAPRSVRKKQEVWSHNLHEELELLNEYIPEFLVVTIDIG-----WYFGRKI--------LRLSPIQRLNILQLGLTLVDQKENVAMTLEF
        MEK I R S  APRS+   +EVWS NL EELELLNEY+PEF VV ID+      W   + I        LR + + RLNILQLGLTL DQK N+AMT EF
Subjt:  MEKTI-RNSMPAPRSVRKKQEVWSHNLHEELELLNEYIPEFLVVTIDIG-----WYFGRKI--------LRLSPIQRLNILQLGLTLVDQKENVAMTLEF

Query:  NFRDFDHISDMKGISLLDLFLKNNGFDFYKLKKDGIVPENFTTLFLPICHSGRIERLITFHGFYEIAYLLKRLKIKFIPIFMATFAATAQHLLGAISNLK
        NFRDFDH+SDM+ +S LD FLKN GFDFYKLKK GI  E+FTTLFLPIC SG+I+R ITFHGFY+I YLLK LKIK IPI MATFA TAQHLLG +S+LK
Subjt:  NFRDFDHISDMKGISLLDLFLKNNGFDFYKLKKDGIVPENFTTLFLPICHSGRIERLITFHGFYEIAYLLKRLKIKFIPIFMATFAATAQHLLGAISNLK

Query:  HMARYCDGLLDGNLALKKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKLPLEQCEGFLYSLPHRIKAFWSILKIINPSATTPP
        HMARYCDGLLDGNL LKK AKLLDVKRI  AHFA  D+L T S+YTKMKQ+FKLPLEQCEGFLY LP+ I  F S+ KII+PS  TPP
Subjt:  HMARYCDGLLDGNLALKKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKLPLEQCEGFLYSLPHRIKAFWSILKIINPSATTPP

XP_022153955.1 putative CCR4-associated factor 1 homolog 8 [Momordica charantia]3.6e-165100Show/hide
Query:  MEKTIRNSMPAPRSVRKKQEVWSHNLHEELELLNEYIPEFLVVTIDIGWYFGRKILRLSPIQRLNILQLGLTLVDQKENVAMTLEFNFRDFDHISDMKGI
        MEKTIRNSMPAPRSVRKKQEVWSHNLHEELELLNEYIPEFLVVTIDIGWYFGRKILRLSPIQRLNILQLGLTLVDQKENVAMTLEFNFRDFDHISDMKGI
Subjt:  MEKTIRNSMPAPRSVRKKQEVWSHNLHEELELLNEYIPEFLVVTIDIGWYFGRKILRLSPIQRLNILQLGLTLVDQKENVAMTLEFNFRDFDHISDMKGI

Query:  SLLDLFLKNNGFDFYKLKKDGIVPENFTTLFLPICHSGRIERLITFHGFYEIAYLLKRLKIKFIPIFMATFAATAQHLLGAISNLKHMARYCDGLLDGNL
        SLLDLFLKNNGFDFYKLKKDGIVPENFTTLFLPICHSGRIERLITFHGFYEIAYLLKRLKIKFIPIFMATFAATAQHLLGAISNLKHMARYCDGLLDGNL
Subjt:  SLLDLFLKNNGFDFYKLKKDGIVPENFTTLFLPICHSGRIERLITFHGFYEIAYLLKRLKIKFIPIFMATFAATAQHLLGAISNLKHMARYCDGLLDGNL

Query:  ALKKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKLPLEQCEGFLYSLPHRIKAFWSILKIINPSATTPPDKATISIMPKDSLIQGEPPQ
        ALKKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKLPLEQCEGFLYSLPHRIKAFWSILKIINPSATTPPDKATISIMPKDSLIQGEPPQ
Subjt:  ALKKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKLPLEQCEGFLYSLPHRIKAFWSILKIINPSATTPPDKATISIMPKDSLIQGEPPQ

XP_022154798.1 probable CCR4-associated factor 1 homolog 6 [Momordica charantia]8.4e-10665.71Show/hide
Query:  MEKTIRNSMPAPRSVRKKQEVWSHNLHEELELLNEYIPEFLVVTID-----IG---------------WYFGRKI------LRLSP--------------
        MEKT   S  APRSV + +EVWS+NLH+ELE+LNEY+PEF +V ID     IG               +++ RK+      LR +P              
Subjt:  MEKTIRNSMPAPRSVRKKQEVWSHNLHEELELLNEYIPEFLVVTID-----IG---------------WYFGRKI------LRLSP--------------

Query:  -IQRLNILQLGLTLVDQKENVAMTLEFNFRDFDHISDMKGISLLDLFLKNNGFDFYKLKKDGIVPENFTTLFLPICHSGRIERLITFHGFYEIAYLLKRL
         + RLNILQLGLTL +Q  NVAMT EFNFRDFDHISDM+G+S LD FLKN GFDFYKLK+DGI  E+FTTLFLPIC SGRIER ITFHGFY+IAYLLK L
Subjt:  -IQRLNILQLGLTLVDQKENVAMTLEFNFRDFDHISDMKGISLLDLFLKNNGFDFYKLKKDGIVPENFTTLFLPICHSGRIERLITFHGFYEIAYLLKRL

Query:  KIKFIPIFMATFAATAQHLLGAISNLKHMARYCDGLLDGNLALKKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKLPLEQCEGFLYSLPHRIKAF
        KIK+IPI MATFAATAQHLLG +S+LKHM RYCDGLLDG+L LKK AKLLDVKRIG AHFAG DSLLTA++YTKMKQMFK+P+EQ EGFLY LPHRI+AF
Subjt:  KIKFIPIFMATFAATAQHLLGAISNLKHMARYCDGLLDGNLALKKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKLPLEQCEGFLYSLPHRIKAF

Query:  WSILKIINPSATTPP
          I+KI++PSA TPP
Subjt:  WSILKIINPSATTPP

XP_022928830.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]8.5e-6651.11Show/hide
Query:  KQEVWSHNLHEELELLNEYIPEFLVVTIDIGWYFGRKILRLSP---------------IQRLNILQLGLTLVDQKENVAMTLEFNFRDFDHISDMKGISL
        K+EVWSHNL EE+EL+  Y+ EF +V ID  +      LR +P               + RL+ILQLGLTL D    + MT EFNF+DFD IS+M+G+  
Subjt:  KQEVWSHNLHEELELLNEYIPEFLVVTIDIGWYFGRKILRLSP---------------IQRLNILQLGLTLVDQKENVAMTLEFNFRDFDHISDMKGISL

Query:  LDLFLKNNGFDFYKLKKDGIVPENFTTLFLPICHSGRIERLITFHGFYEIAYLLKRLKIKFIPIFMATFAATAQHLLGAISNLKHMARYCDGLLDGNLAL
        LD FLKN GF+F KL+  GI P+ F+  F P+  SGRI++ ITFHG Y+IAYL+K   I  +P  M+ FA  A HLLG +++LKHMARY D L +GNL L
Subjt:  LDLFLKNNGFDFYKLKKDGIVPENFTTLFLPICHSGRIERLITFHGFYEIAYLLKRLKIKFIPIFMATFAATAQHLLGAISNLKHMARYCDGLLDGNLAL

Query:  KKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKLPLEQCEGFLYSLPHRIKAFWSILKIINPSATT
        KK AKLL + R+GTAHFAG DSLLTAS+Y KMK + K+  +  EGFLY LP+ I+ +   + I++PS  T
Subjt:  KKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKLPLEQCEGFLYSLPHRIKAFWSILKIINPSATT

XP_023550519.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo]3.2e-6551.11Show/hide
Query:  KQEVWSHNLHEELELLNEYIPEFLVVTIDIGWYFGRKILRLSP---------------IQRLNILQLGLTLVDQKENVAMTLEFNFRDFDHISDMKGISL
        K+EVWS+NL EE+EL+  Y+ EF +V +D  +      LR +P               + RL+ILQLGLTL+D+   + MT EFNF+DFD IS+M+G+  
Subjt:  KQEVWSHNLHEELELLNEYIPEFLVVTIDIGWYFGRKILRLSP---------------IQRLNILQLGLTLVDQKENVAMTLEFNFRDFDHISDMKGISL

Query:  LDLFLKNNGFDFYKLKKDGIVPENFTTLFLPICHSGRIERLITFHGFYEIAYLLKRLKIKFIPIFMATFAATAQHLLGAISNLKHMARYCDGLLDGNLAL
        LD FLKN GF+F KL+  GI PE F+  F P+  S RI+R ITFHG Y+IAYL+K   I  +P  M+ FA  A HLLG +++LKHMARY D L +GNL L
Subjt:  LDLFLKNNGFDFYKLKKDGIVPENFTTLFLPICHSGRIERLITFHGFYEIAYLLKRLKIKFIPIFMATFAATAQHLLGAISNLKHMARYCDGLLDGNLAL

Query:  KKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKLPLEQCEGFLYSLPHRIKAFWSILKIINPSATT
        KK AKLL + RIGTAHFAG DSLLTAS+Y KMK + K+  +  EGFLY LP+ I+ +   + I++PS  T
Subjt:  KKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKLPLEQCEGFLYSLPHRIKAFWSILKIINPSATT

TrEMBL top hitse value%identityAlignment
A0A6J1CXZ5 Poly(A)-specific ribonuclease3.3e-10068.75Show/hide
Query:  MEKTI-RNSMPAPRSVRKKQEVWSHNLHEELELLNEYIPEFLVVTIDIG-----WYFGRKI--------LRLSPIQRLNILQLGLTLVDQKENVAMTLEF
        MEK I R S  APRS+   +EVWS NL EELELLNEY+PEF VV ID+      W   + I        LR + + RLNILQLGLTL DQK N+AMT EF
Subjt:  MEKTI-RNSMPAPRSVRKKQEVWSHNLHEELELLNEYIPEFLVVTIDIG-----WYFGRKI--------LRLSPIQRLNILQLGLTLVDQKENVAMTLEF

Query:  NFRDFDHISDMKGISLLDLFLKNNGFDFYKLKKDGIVPENFTTLFLPICHSGRIERLITFHGFYEIAYLLKRLKIKFIPIFMATFAATAQHLLGAISNLK
        NFRDFDH+SDM+ +S LD FLKN GFDFYKLKK GI  E+FTTLFLPIC SG+I+R ITFHGFY+I YLLK LKIK IPI MATFA TAQHLLG +S+LK
Subjt:  NFRDFDHISDMKGISLLDLFLKNNGFDFYKLKKDGIVPENFTTLFLPICHSGRIERLITFHGFYEIAYLLKRLKIKFIPIFMATFAATAQHLLGAISNLK

Query:  HMARYCDGLLDGNLALKKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKLPLEQCEGFLYSLPHRIKAFWSILKIINPSATTPP
        HMARYCDGLLDGNL LKK AKLLDVKRI  AHFA  D+L T S+YTKMKQ+FKLPLEQCEGFLY LP+ I  F S+ KII+PS  TPP
Subjt:  HMARYCDGLLDGNLALKKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKLPLEQCEGFLYSLPHRIKAFWSILKIINPSATTPP

A0A6J1DIB1 putative CCR4-associated factor 1 homolog 81.7e-165100Show/hide
Query:  MEKTIRNSMPAPRSVRKKQEVWSHNLHEELELLNEYIPEFLVVTIDIGWYFGRKILRLSPIQRLNILQLGLTLVDQKENVAMTLEFNFRDFDHISDMKGI
        MEKTIRNSMPAPRSVRKKQEVWSHNLHEELELLNEYIPEFLVVTIDIGWYFGRKILRLSPIQRLNILQLGLTLVDQKENVAMTLEFNFRDFDHISDMKGI
Subjt:  MEKTIRNSMPAPRSVRKKQEVWSHNLHEELELLNEYIPEFLVVTIDIGWYFGRKILRLSPIQRLNILQLGLTLVDQKENVAMTLEFNFRDFDHISDMKGI

Query:  SLLDLFLKNNGFDFYKLKKDGIVPENFTTLFLPICHSGRIERLITFHGFYEIAYLLKRLKIKFIPIFMATFAATAQHLLGAISNLKHMARYCDGLLDGNL
        SLLDLFLKNNGFDFYKLKKDGIVPENFTTLFLPICHSGRIERLITFHGFYEIAYLLKRLKIKFIPIFMATFAATAQHLLGAISNLKHMARYCDGLLDGNL
Subjt:  SLLDLFLKNNGFDFYKLKKDGIVPENFTTLFLPICHSGRIERLITFHGFYEIAYLLKRLKIKFIPIFMATFAATAQHLLGAISNLKHMARYCDGLLDGNL

Query:  ALKKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKLPLEQCEGFLYSLPHRIKAFWSILKIINPSATTPPDKATISIMPKDSLIQGEPPQ
        ALKKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKLPLEQCEGFLYSLPHRIKAFWSILKIINPSATTPPDKATISIMPKDSLIQGEPPQ
Subjt:  ALKKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKLPLEQCEGFLYSLPHRIKAFWSILKIINPSATTPPDKATISIMPKDSLIQGEPPQ

A0A6J1DLA5 Poly(A)-specific ribonuclease4.1e-10665.71Show/hide
Query:  MEKTIRNSMPAPRSVRKKQEVWSHNLHEELELLNEYIPEFLVVTID-----IG---------------WYFGRKI------LRLSP--------------
        MEKT   S  APRSV + +EVWS+NLH+ELE+LNEY+PEF +V ID     IG               +++ RK+      LR +P              
Subjt:  MEKTIRNSMPAPRSVRKKQEVWSHNLHEELELLNEYIPEFLVVTID-----IG---------------WYFGRKI------LRLSP--------------

Query:  -IQRLNILQLGLTLVDQKENVAMTLEFNFRDFDHISDMKGISLLDLFLKNNGFDFYKLKKDGIVPENFTTLFLPICHSGRIERLITFHGFYEIAYLLKRL
         + RLNILQLGLTL +Q  NVAMT EFNFRDFDHISDM+G+S LD FLKN GFDFYKLK+DGI  E+FTTLFLPIC SGRIER ITFHGFY+IAYLLK L
Subjt:  -IQRLNILQLGLTLVDQKENVAMTLEFNFRDFDHISDMKGISLLDLFLKNNGFDFYKLKKDGIVPENFTTLFLPICHSGRIERLITFHGFYEIAYLLKRL

Query:  KIKFIPIFMATFAATAQHLLGAISNLKHMARYCDGLLDGNLALKKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKLPLEQCEGFLYSLPHRIKAF
        KIK+IPI MATFAATAQHLLG +S+LKHM RYCDGLLDG+L LKK AKLLDVKRIG AHFAG DSLLTA++YTKMKQMFK+P+EQ EGFLY LPHRI+AF
Subjt:  KIKFIPIFMATFAATAQHLLGAISNLKHMARYCDGLLDGNLALKKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKLPLEQCEGFLYSLPHRIKAF

Query:  WSILKIINPSATTPP
          I+KI++PSA TPP
Subjt:  WSILKIINPSATTPP

A0A6J1ESM7 Poly(A)-specific ribonuclease4.1e-6651.11Show/hide
Query:  KQEVWSHNLHEELELLNEYIPEFLVVTIDIGWYFGRKILRLSP---------------IQRLNILQLGLTLVDQKENVAMTLEFNFRDFDHISDMKGISL
        K+EVWSHNL EE+EL+  Y+ EF +V ID  +      LR +P               + RL+ILQLGLTL D    + MT EFNF+DFD IS+M+G+  
Subjt:  KQEVWSHNLHEELELLNEYIPEFLVVTIDIGWYFGRKILRLSP---------------IQRLNILQLGLTLVDQKENVAMTLEFNFRDFDHISDMKGISL

Query:  LDLFLKNNGFDFYKLKKDGIVPENFTTLFLPICHSGRIERLITFHGFYEIAYLLKRLKIKFIPIFMATFAATAQHLLGAISNLKHMARYCDGLLDGNLAL
        LD FLKN GF+F KL+  GI P+ F+  F P+  SGRI++ ITFHG Y+IAYL+K   I  +P  M+ FA  A HLLG +++LKHMARY D L +GNL L
Subjt:  LDLFLKNNGFDFYKLKKDGIVPENFTTLFLPICHSGRIERLITFHGFYEIAYLLKRLKIKFIPIFMATFAATAQHLLGAISNLKHMARYCDGLLDGNLAL

Query:  KKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKLPLEQCEGFLYSLPHRIKAFWSILKIINPSATT
        KK AKLL + R+GTAHFAG DSLLTAS+Y KMK + K+  +  EGFLY LP+ I+ +   + I++PS  T
Subjt:  KKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKLPLEQCEGFLYSLPHRIKAFWSILKIINPSATT

A0A6J1HSR3 Poly(A)-specific ribonuclease5.0e-6450.93Show/hide
Query:  KQEVWSHNLHEELELLNEYIPEFLVVTIDIGWYFGRKILRLSP---------------IQRLNILQLGLTLVDQKENVAMTLEFNFRDFDHISDMKGISL
        K++VWSHNL EE+EL+   + EF +V +D  +      LR +P               + RL+ILQLGLTL D+   + MT EFNF+DFD IS+M+G+  
Subjt:  KQEVWSHNLHEELELLNEYIPEFLVVTIDIGWYFGRKILRLSP---------------IQRLNILQLGLTLVDQKENVAMTLEFNFRDFDHISDMKGISL

Query:  LDLFLKNNGFDFYKLKKDGIVPENFTTLFLPICHSGRIERLITFHGFYEIAYLLKRLKIKFIPIFMATFAATAQHLLGAISNLKHMARYCDGLLDGNLAL
        LD FLKN GF+F  L+  GI PE F   F PI  SGRI+R ITFHG Y+IAYL+K   I  +P  M+ FA  A HLLG +++LKHMARY D LL+GNL L
Subjt:  LDLFLKNNGFDFYKLKKDGIVPENFTTLFLPICHSGRIERLITFHGFYEIAYLLKRLKIKFIPIFMATFAATAQHLLGAISNLKHMARYCDGLLDGNLAL

Query:  KKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKLPLEQCEGFLYSLPHRIKAFWSILKIINPSAT
        KK AK+L V RIGTAHFAG DSLLTAS+Y KM+ + K+  +  EGFLY LP+ I+ +   + I++P  T
Subjt:  KKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKLPLEQCEGFLYSLPHRIKAFWSILKIINPSAT

SwissProt top hitse value%identityAlignment
O64773 Probable CCR4-associated factor 1 homolog 53.0e-2138.42Show/hide
Query:  IQRLNILQLGLTLVDQKENVAMTLEFNFRDFDHISDMKGISLLDLFLKNNGFDFYKLKKDGIVPENFTTLFLPICHS--GRIERLITFHGFYEIAYLLKR
        +   +++QLGLTL    + +  T E N  DF+    +K    +  FLKNNG D  K++++GI  E F   F  I +   G++ R +TF G Y+ AYLLK 
Subjt:  IQRLNILQLGLTLVDQKENVAMTLEFNFRDFDHISDMKGISLLDLFLKNNGFDFYKLKKDGIVPENFTTLFLPICHS--GRIERLITFHGFYEIAYLLKR

Query:  LKIKFIPIFMATFAATAQHLLGA-ISNLKHMARYCDGLLDGNLALKKFAKLLDVKRIGTAHFAGFDSLLTASIYTKM
        L  K +P     F  T Q LLG  + ++K MA  C G L     L++ A +L ++R+G AH AG DS LTA ++TK+
Subjt:  LKIKFIPIFMATFAATAQHLLGA-ISNLKHMARYCDGLLDGNLALKKFAKLLDVKRIGTAHFAGFDSLLTASIYTKM

Q9LXM4 Putative CCR4-associated factor 1 homolog 81.6e-2235.91Show/hide
Query:  IQRLNILQLGLTLVDQKENVAMTLEFNFRDFDHISDMKGISLLDLFLKNNGFDFYKLKKDGIVPEN-FTTLFLPICHSGRIERLITFHGFYEIAYLLKRL
        + R  ++QLGLTL D    +  T E NF DF  + D +    ++ FL+ NG D  K++++GI  E  F+ +F  +  + R    +TFHG Y+IAYLLK  
Subjt:  IQRLNILQLGLTLVDQKENVAMTLEFNFRDFDHISDMKGISLLDLFLKNNGFDFYKLKKDGIVPEN-FTTLFLPICHSGRIERLITFHGFYEIAYLLKRL

Query:  KIKFIPIFMATFAATAQHLLGAISNLKHMARYCDGLLDGNLALKKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKL
          + +P+    F+     +LG++ +LK MA  C+G L   L L+  A    + R+GTAH AG ++ LTA ++ K+   F L
Subjt:  KIKFIPIFMATFAATAQHLLGAISNLKHMARYCDGLLDGNLALKKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKL

Q9S9P2 Probable CCR4-associated factor 1 homolog 22.2e-2431.32Show/hide
Query:  QEVWSHNLHEELELLNEYIPEFLVVTID---------------------IGWYFGRKILRLSPIQRLNILQLGLTLVDQKENV-------AMTLEFNFRD
        +EVW+HNL +E+ L+ + I +F  V +D                     I + +    L+ + +  L ++QLGLTL D+K N+           +FNFR+
Subjt:  QEVWSHNLHEELELLNEYIPEFLVVTID---------------------IGWYFGRKILRLSPIQRLNILQLGLTLVDQKENV-------AMTLEFNFRD

Query:  FDHISDMKGISLLDLFLKNNGFDFYKLKKDGIVPENFTTLFL--PICHSGRIERLITFHGFYEIAYLLKRLKIKFIPIFMATFAATAQHLLGAISNLKHM
        F+ ISDM  +  ++L L+ +  D  K  + G+  + F  L +   +  + +I   +TFH  Y+  YLLK L  K +P  ++ F    +     + ++K++
Subjt:  FDHISDMKGISLLDLFLKNNGFDFYKLKKDGIVPENFTTLFL--PICHSGRIERLITFHGFYEIAYLLKRLKIKFIPIFMATFAATAQHLLGAISNLKHM

Query:  ARYCDGLLDGNLALKKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKL-PLEQCEGFLYSL
          +C  L  G   L+K A+LL VKR+G +H AG DSLLT   + KMK+ F    L +  GFL+ L
Subjt:  ARYCDGLLDGNLALKKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKL-PLEQCEGFLYSL

Q9SAI2 Probable CCR4-associated factor 1 homolog 69.9e-2531.42Show/hide
Query:  QEVWSHNLHEELELLNEYIPEFLVVTID----------IGWY-----FGRKILRLSPIQRLNILQLGLTLVDQKENVA-------MTLEFNFRDFDHISD
        +EVW+ NL EE++L+ + + +F  V +D          +G +     +  + L+ + +  L ++QLGLT  +++ N+           +FNFR+FD  SD
Subjt:  QEVWSHNLHEELELLNEYIPEFLVVTID----------IGWY-----FGRKILRLSPIQRLNILQLGLTLVDQKENVA-------MTLEFNFRDFDHISD

Query:  MKGISLLDLFLKNNGFDFYKLKKDGIVPENFTTLFLPICHSGRI----ERLITFHGFYEIAYLLKRLKIKFIPIFMATFAATAQHLLGAISNLKHMARYC
        +  +  ++L LK +G D  K   DGI  + F  L +    SG +       +TFH  Y+  YLLK L  + +P     F          + ++KH+ ++C
Subjt:  MKGISLLDLFLKNNGFDFYKLKKDGIVPENFTTLFLPICHSGRI----ERLITFHGFYEIAYLLKRLKIKFIPIFMATFAATAQHLLGAISNLKHMARYC

Query:  DGLLDGNLALKKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKL-PLEQCEGFLYSL
        + L  G   L K A+LL+V+R+G  H AG DSLLT+  + K+K+ F + PL +  G LY L
Subjt:  DGLLDGNLALKKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKL-PLEQCEGFLYSL

Q9SKZ2 Probable CCR4-associated factor 1 homolog 74.9e-2431.3Show/hide
Query:  QEVWSHNLHEELELLNEYIPEFLVVTID----------IGWY-----FGRKILRLSPIQRLNILQLGLTLVDQK--------ENVAMTLEFNFRDFDHIS
        +EVW+ NL  E+ L+ E + +F  V +D          +G +     +  + L+ + +  L ++QLGLT  D+K        +N     +FNFR+FD  S
Subjt:  QEVWSHNLHEELELLNEYIPEFLVVTID----------IGWY-----FGRKILRLSPIQRLNILQLGLTLVDQK--------ENVAMTLEFNFRDFDHIS

Query:  DMKGISLLDLFLKNNGFDFYKLKKDGIVPENFTTLFLPICHSGRI----ERLITFHGFYEIAYLLKRLKIKFIPIFMATFAATAQHLLGAISNLKHMARY
        D+     ++L L+ +G DF K  + GI  + F  L +    SG +       +TFH  Y+  YLLK L  + +P     F          + ++KH+ ++
Subjt:  DMKGISLLDLFLKNNGFDFYKLKKDGIVPENFTTLFLPICHSGRI----ERLITFHGFYEIAYLLKRLKIKFIPIFMATFAATAQHLLGAISNLKHMARY

Query:  CDGLLDGNLALKKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKL-PLEQCEGFLYSL
        C+ L  G   L K A+LLDV+R+G  H AG DSLLT+  + K+++ F +  +E+  G LY L
Subjt:  CDGLLDGNLALKKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKL-PLEQCEGFLYSL

Arabidopsis top hitse value%identityAlignment
AT1G15920.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.6e-2531.32Show/hide
Query:  QEVWSHNLHEELELLNEYIPEFLVVTID---------------------IGWYFGRKILRLSPIQRLNILQLGLTLVDQKENV-------AMTLEFNFRD
        +EVW+HNL +E+ L+ + I +F  V +D                     I + +    L+ + +  L ++QLGLTL D+K N+           +FNFR+
Subjt:  QEVWSHNLHEELELLNEYIPEFLVVTID---------------------IGWYFGRKILRLSPIQRLNILQLGLTLVDQKENV-------AMTLEFNFRD

Query:  FDHISDMKGISLLDLFLKNNGFDFYKLKKDGIVPENFTTLFL--PICHSGRIERLITFHGFYEIAYLLKRLKIKFIPIFMATFAATAQHLLGAISNLKHM
        F+ ISDM  +  ++L L+ +  D  K  + G+  + F  L +   +  + +I   +TFH  Y+  YLLK L  K +P  ++ F    +     + ++K++
Subjt:  FDHISDMKGISLLDLFLKNNGFDFYKLKKDGIVPENFTTLFL--PICHSGRIERLITFHGFYEIAYLLKRLKIKFIPIFMATFAATAQHLLGAISNLKHM

Query:  ARYCDGLLDGNLALKKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKL-PLEQCEGFLYSL
          +C  L  G   L+K A+LL VKR+G +H AG DSLLT   + KMK+ F    L +  GFL+ L
Subjt:  ARYCDGLLDGNLALKKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKL-PLEQCEGFLYSL

AT1G15920.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.6e-2531.32Show/hide
Query:  QEVWSHNLHEELELLNEYIPEFLVVTID---------------------IGWYFGRKILRLSPIQRLNILQLGLTLVDQKENV-------AMTLEFNFRD
        +EVW+HNL +E+ L+ + I +F  V +D                     I + +    L+ + +  L ++QLGLTL D+K N+           +FNFR+
Subjt:  QEVWSHNLHEELELLNEYIPEFLVVTID---------------------IGWYFGRKILRLSPIQRLNILQLGLTLVDQKENV-------AMTLEFNFRD

Query:  FDHISDMKGISLLDLFLKNNGFDFYKLKKDGIVPENFTTLFL--PICHSGRIERLITFHGFYEIAYLLKRLKIKFIPIFMATFAATAQHLLGAISNLKHM
        F+ ISDM  +  ++L L+ +  D  K  + G+  + F  L +   +  + +I   +TFH  Y+  YLLK L  K +P  ++ F    +     + ++K++
Subjt:  FDHISDMKGISLLDLFLKNNGFDFYKLKKDGIVPENFTTLFL--PICHSGRIERLITFHGFYEIAYLLKRLKIKFIPIFMATFAATAQHLLGAISNLKHM

Query:  ARYCDGLLDGNLALKKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKL-PLEQCEGFLYSL
          +C  L  G   L+K A+LL VKR+G +H AG DSLLT   + KMK+ F    L +  GFL+ L
Subjt:  ARYCDGLLDGNLALKKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKL-PLEQCEGFLYSL

AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.0e-2631.42Show/hide
Query:  QEVWSHNLHEELELLNEYIPEFLVVTID----------IGWY-----FGRKILRLSPIQRLNILQLGLTLVDQKENVA-------MTLEFNFRDFDHISD
        +EVW+ NL EE++L+ + + +F  V +D          +G +     +  + L+ + +  L ++QLGLT  +++ N+           +FNFR+FD  SD
Subjt:  QEVWSHNLHEELELLNEYIPEFLVVTID----------IGWY-----FGRKILRLSPIQRLNILQLGLTLVDQKENVA-------MTLEFNFRDFDHISD

Query:  MKGISLLDLFLKNNGFDFYKLKKDGIVPENFTTLFLPICHSGRI----ERLITFHGFYEIAYLLKRLKIKFIPIFMATFAATAQHLLGAISNLKHMARYC
        +  +  ++L LK +G D  K   DGI  + F  L +    SG +       +TFH  Y+  YLLK L  + +P     F          + ++KH+ ++C
Subjt:  MKGISLLDLFLKNNGFDFYKLKKDGIVPENFTTLFLPICHSGRI----ERLITFHGFYEIAYLLKRLKIKFIPIFMATFAATAQHLLGAISNLKHMARYC

Query:  DGLLDGNLALKKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKL-PLEQCEGFLYSL
        + L  G   L K A+LL+V+R+G  H AG DSLLT+  + K+K+ F + PL +  G LY L
Subjt:  DGLLDGNLALKKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKL-PLEQCEGFLYSL

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.0e-2631.42Show/hide
Query:  QEVWSHNLHEELELLNEYIPEFLVVTID----------IGWY-----FGRKILRLSPIQRLNILQLGLTLVDQKENVA-------MTLEFNFRDFDHISD
        +EVW+ NL EE++L+ + + +F  V +D          +G +     +  + L+ + +  L ++QLGLT  +++ N+           +FNFR+FD  SD
Subjt:  QEVWSHNLHEELELLNEYIPEFLVVTID----------IGWY-----FGRKILRLSPIQRLNILQLGLTLVDQKENVA-------MTLEFNFRDFDHISD

Query:  MKGISLLDLFLKNNGFDFYKLKKDGIVPENFTTLFLPICHSGRI----ERLITFHGFYEIAYLLKRLKIKFIPIFMATFAATAQHLLGAISNLKHMARYC
        +  +  ++L LK +G D  K   DGI  + F  L +    SG +       +TFH  Y+  YLLK L  + +P     F          + ++KH+ ++C
Subjt:  MKGISLLDLFLKNNGFDFYKLKKDGIVPENFTTLFLPICHSGRI----ERLITFHGFYEIAYLLKRLKIKFIPIFMATFAATAQHLLGAISNLKHMARYC

Query:  DGLLDGNLALKKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKL-PLEQCEGFLYSL
        + L  G   L K A+LL+V+R+G  H AG DSLLT+  + K+K+ F + PL +  G LY L
Subjt:  DGLLDGNLALKKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKL-PLEQCEGFLYSL

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.0e-2631.42Show/hide
Query:  QEVWSHNLHEELELLNEYIPEFLVVTID----------IGWY-----FGRKILRLSPIQRLNILQLGLTLVDQKENVA-------MTLEFNFRDFDHISD
        +EVW+ NL EE++L+ + + +F  V +D          +G +     +  + L+ + +  L ++QLGLT  +++ N+           +FNFR+FD  SD
Subjt:  QEVWSHNLHEELELLNEYIPEFLVVTID----------IGWY-----FGRKILRLSPIQRLNILQLGLTLVDQKENVA-------MTLEFNFRDFDHISD

Query:  MKGISLLDLFLKNNGFDFYKLKKDGIVPENFTTLFLPICHSGRI----ERLITFHGFYEIAYLLKRLKIKFIPIFMATFAATAQHLLGAISNLKHMARYC
        +  +  ++L LK +G D  K   DGI  + F  L +    SG +       +TFH  Y+  YLLK L  + +P     F          + ++KH+ ++C
Subjt:  MKGISLLDLFLKNNGFDFYKLKKDGIVPENFTTLFLPICHSGRI----ERLITFHGFYEIAYLLKRLKIKFIPIFMATFAATAQHLLGAISNLKHMARYC

Query:  DGLLDGNLALKKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKL-PLEQCEGFLYSL
        + L  G   L K A+LL+V+R+G  H AG DSLLT+  + K+K+ F + PL +  G LY L
Subjt:  DGLLDGNLALKKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKL-PLEQCEGFLYSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGACGATTAGAAATTCAATGCCAGCCCCAAGATCTGTCCGCAAGAAACAAGAAGTTTGGTCTCACAATCTTCACGAAGAGTTAGAGCTGCTGAATGAGTATAT
TCCAGAGTTTCTAGTAGTCACCATCGATATTGGCTGGTATTTCGGAAGAAAAATTCTACGATTATCTCCGATTCAACGATTAAACATACTCCAACTCGGTCTCACACTCG
TCGATCAGAAGGAAAATGTAGCAATGACTTTAGAGTTTAATTTTAGAGATTTTGATCACATTAGCGATATGAAAGGCATTTCTTTGCTGGATTTGTTTCTAAAGAACAAC
GGATTTGATTTCTACAAATTGAAGAAAGACGGAATAGTTCCAGAGAATTTCACCACTCTGTTTCTACCCATTTGTCATAGTGGTAGAATCGAGAGATTGATCACCTTTCA
TGGCTTCTATGAAATTGCTTATCTCCTCAAACGGCTCAAAATCAAATTCATACCCATTTTTATGGCAACGTTTGCCGCCACCGCTCAACATCTATTAGGTGCTATCAGCA
ATTTGAAGCATATGGCTCGCTACTGTGATGGATTGCTCGACGGCAACCTAGCATTAAAAAAATTTGCCAAGCTACTCGACGTGAAGCGAATAGGTACTGCACATTTTGCC
GGTTTCGATAGTTTACTCACAGCTTCAATATACACCAAGATGAAGCAAATGTTCAAGCTTCCACTAGAGCAGTGTGAAGGGTTTCTCTACAGCTTGCCTCATCGGATTAA
GGCTTTTTGGTCAATCCTGAAGATCATCAATCCGTCCGCCACGACTCCTCCTGATAAAGCAACTATCTCAATTATGCCTAAGGACTCCCTTATTCAAGGTGAACCCCCAC
AATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGACGATTAGAAATTCAATGCCAGCCCCAAGATCTGTCCGCAAGAAACAAGAAGTTTGGTCTCACAATCTTCACGAAGAGTTAGAGCTGCTGAATGAGTATAT
TCCAGAGTTTCTAGTAGTCACCATCGATATTGGCTGGTATTTCGGAAGAAAAATTCTACGATTATCTCCGATTCAACGATTAAACATACTCCAACTCGGTCTCACACTCG
TCGATCAGAAGGAAAATGTAGCAATGACTTTAGAGTTTAATTTTAGAGATTTTGATCACATTAGCGATATGAAAGGCATTTCTTTGCTGGATTTGTTTCTAAAGAACAAC
GGATTTGATTTCTACAAATTGAAGAAAGACGGAATAGTTCCAGAGAATTTCACCACTCTGTTTCTACCCATTTGTCATAGTGGTAGAATCGAGAGATTGATCACCTTTCA
TGGCTTCTATGAAATTGCTTATCTCCTCAAACGGCTCAAAATCAAATTCATACCCATTTTTATGGCAACGTTTGCCGCCACCGCTCAACATCTATTAGGTGCTATCAGCA
ATTTGAAGCATATGGCTCGCTACTGTGATGGATTGCTCGACGGCAACCTAGCATTAAAAAAATTTGCCAAGCTACTCGACGTGAAGCGAATAGGTACTGCACATTTTGCC
GGTTTCGATAGTTTACTCACAGCTTCAATATACACCAAGATGAAGCAAATGTTCAAGCTTCCACTAGAGCAGTGTGAAGGGTTTCTCTACAGCTTGCCTCATCGGATTAA
GGCTTTTTGGTCAATCCTGAAGATCATCAATCCGTCCGCCACGACTCCTCCTGATAAAGCAACTATCTCAATTATGCCTAAGGACTCCCTTATTCAAGGTGAACCCCCAC
AATGA
Protein sequenceShow/hide protein sequence
MEKTIRNSMPAPRSVRKKQEVWSHNLHEELELLNEYIPEFLVVTIDIGWYFGRKILRLSPIQRLNILQLGLTLVDQKENVAMTLEFNFRDFDHISDMKGISLLDLFLKNN
GFDFYKLKKDGIVPENFTTLFLPICHSGRIERLITFHGFYEIAYLLKRLKIKFIPIFMATFAATAQHLLGAISNLKHMARYCDGLLDGNLALKKFAKLLDVKRIGTAHFA
GFDSLLTASIYTKMKQMFKLPLEQCEGFLYSLPHRIKAFWSILKIINPSATTPPDKATISIMPKDSLIQGEPPQ