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Moc09g31060 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g31060
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr9:23452740..23453472
RNA-Seq ExpressionMoc09g31060
SyntenyMoc09g31060
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149419.1 uncharacterized protein LOC111017849 [Momordica charantia]4.6e-0636.61Show/hide
Query:  GRGKH-EGLRKEVPRCVDHGNLQGGVRMLGVRLGGSTRAAEVKQDLKCGRPERYDRFTLLNEPMAEILANIQDLKLD-LLIEPNLRRRDPEKRNRSKFYH
        GRG+  + + K  P+  D G+   G         G TR+          RP  Y+RFT +  P++EIL NI++  ++ LL  P   R  PE+R++ K+  
Subjt:  GRGKH-EGLRKEVPRCVDHGNLQGGVRMLGVRLGGSTRAAEVKQDLKCGRPERYDRFTLLNEPMAEILANIQDLKLD-LLIEPNLRRRDPEKRNRSKFYH

Query:  FHKDHDHNTSDC
        FH++HDHNTSDC
Subjt:  FHKDHDHNTSDC

XP_022158214.1 uncharacterized protein LOC111024750 [Momordica charantia]1.6e-0645.45Show/hide
Query:  STRAAEVKQDLKCGRPERYDRFTLLNEPMAEILANIQDLKLD-LLIEPNLRRRDPEKRNRSKFYHFHKDHDHNTSDC
        S RA   + D    R   Y+R+T    P++EIL NI+D  ++ LL  P     DPEKRN+ K+  FH+DHDHNTS C
Subjt:  STRAAEVKQDLKCGRPERYDRFTLLNEPMAEILANIQDLKLD-LLIEPNLRRRDPEKRNRSKFYHFHKDHDHNTSDC

XP_022158651.1 uncharacterized protein LOC111025110 [Momordica charantia]5.8e-1766.67Show/hide
Query:  RAAEVKQDLKCGRPERYDRFTLLNEPMAEILANIQDLKLDLLIEPNLRRRDPEKRNRSKFYHFHKDHDHNTSDCH
        R +  KQ  K GRPERYDRFT LN  +A+I ANIQD KL+LL EPN   RDPEK NR KF HFHKDH H+TSDC+
Subjt:  RAAEVKQDLKCGRPERYDRFTLLNEPMAEILANIQDLKLDLLIEPNLRRRDPEKRNRSKFYHFHKDHDHNTSDCH

XP_022159035.1 uncharacterized protein LOC111025477 [Momordica charantia]1.4e-0769.39Show/hide
Query:  MAEILANIQDLKLDLLIEPNLRRRDPEKRNRSKFYHFHKDHDHNTSDCH
        MAEI ANI++ KLDLL EPN   RD EKR++SKFYHFHKDH H+ SDC+
Subjt:  MAEILANIQDLKLDLLIEPNLRRRDPEKRNRSKFYHFHKDHDHNTSDCH

XP_022159079.1 uncharacterized protein LOC111025521 [Momordica charantia]3.5e-0642.86Show/hide
Query:  STRAAEVKQDLKCGRPERYDRFTLLNEPMAEILANIQDLKLD-LLIEPNLRRRDPEKRNRSKFYHFHKDHDHNTSDC
        S++A   + D    R   Y+R+T    P +EIL NI++  ++ LL  P   R DPEKRN+ K+  FH+DH HNTS+C
Subjt:  STRAAEVKQDLKCGRPERYDRFTLLNEPMAEILANIQDLKLD-LLIEPNLRRRDPEKRNRSKFYHFHKDHDHNTSDC

TrEMBL top hitse value%identityAlignment
A0A6J1D701 uncharacterized protein LOC1110178492.2e-0636.61Show/hide
Query:  GRGKH-EGLRKEVPRCVDHGNLQGGVRMLGVRLGGSTRAAEVKQDLKCGRPERYDRFTLLNEPMAEILANIQDLKLD-LLIEPNLRRRDPEKRNRSKFYH
        GRG+  + + K  P+  D G+   G         G TR+          RP  Y+RFT +  P++EIL NI++  ++ LL  P   R  PE+R++ K+  
Subjt:  GRGKH-EGLRKEVPRCVDHGNLQGGVRMLGVRLGGSTRAAEVKQDLKCGRPERYDRFTLLNEPMAEILANIQDLKLD-LLIEPNLRRRDPEKRNRSKFYH

Query:  FHKDHDHNTSDC
        FH++HDHNTSDC
Subjt:  FHKDHDHNTSDC

A0A6J1DXI1 uncharacterized protein LOC1110254776.9e-0869.39Show/hide
Query:  MAEILANIQDLKLDLLIEPNLRRRDPEKRNRSKFYHFHKDHDHNTSDCH
        MAEI ANI++ KLDLL EPN   RD EKR++SKFYHFHKDH H+ SDC+
Subjt:  MAEILANIQDLKLDLLIEPNLRRRDPEKRNRSKFYHFHKDHDHNTSDCH

A0A6J1DYR2 uncharacterized protein LOC1110247507.7e-0745.45Show/hide
Query:  STRAAEVKQDLKCGRPERYDRFTLLNEPMAEILANIQDLKLD-LLIEPNLRRRDPEKRNRSKFYHFHKDHDHNTSDC
        S RA   + D    R   Y+R+T    P++EIL NI+D  ++ LL  P     DPEKRN+ K+  FH+DHDHNTS C
Subjt:  STRAAEVKQDLKCGRPERYDRFTLLNEPMAEILANIQDLKLD-LLIEPNLRRRDPEKRNRSKFYHFHKDHDHNTSDC

A0A6J1E1B3 uncharacterized protein LOC1110255211.7e-0642.86Show/hide
Query:  STRAAEVKQDLKCGRPERYDRFTLLNEPMAEILANIQDLKLD-LLIEPNLRRRDPEKRNRSKFYHFHKDHDHNTSDC
        S++A   + D    R   Y+R+T    P +EIL NI++  ++ LL  P   R DPEKRN+ K+  FH+DH HNTS+C
Subjt:  STRAAEVKQDLKCGRPERYDRFTLLNEPMAEILANIQDLKLD-LLIEPNLRRRDPEKRNRSKFYHFHKDHDHNTSDC

A0A6J1E1K0 uncharacterized protein LOC1110251102.8e-1766.67Show/hide
Query:  RAAEVKQDLKCGRPERYDRFTLLNEPMAEILANIQDLKLDLLIEPNLRRRDPEKRNRSKFYHFHKDHDHNTSDCH
        R +  KQ  K GRPERYDRFT LN  +A+I ANIQD KL+LL EPN   RDPEK NR KF HFHKDH H+TSDC+
Subjt:  RAAEVKQDLKCGRPERYDRFTLLNEPMAEILANIQDLKLDLLIEPNLRRRDPEKRNRSKFYHFHKDHDHNTSDCH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTCCACGCTGACCTTGACGTGATGATGTGTAGGGCGTTATCTGTGACCATAGGGGTCCGCGAAGAAATGGAACGTGCAACTCACGCCCCACTCCATTTCCTCCT
AAAAGCAACTCCACAAGGCCTTCGTGGCCTAGTTTGCGGCACAATGGGAGACTCAACACTCAGCCCAGTATTTGCTCGCGATAAGGCAGAAGGCAGGGGAAAGCATGAGG
GACTACGTAAGGAGGTTCCTCGCTGCGTAGATCACGGTAACTTACAAGGAGGAGTTCGCATGCTCGGTGTTCGCCTCGGGGGTTCGACACGAGCAGCTGAAGTGAAGCAG
GACCTGAAGTGCGGACGACCTGAAAGGTATGACCGCTTTACACTTTTGAACGAGCCGATGGCTGAAATTCTCGCCAACATACAAGACTTGAAGCTCGACCTACTCATTGA
GCCTAACCTTAGGCGTCGAGACCCCGAGAAGCGCAACCGATCAAAGTTCTACCATTTCCACAAGGACCACGACCATAACACCTCCGACTGCCACACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTCCACGCTGACCTTGACGTGATGATGTGTAGGGCGTTATCTGTGACCATAGGGGTCCGCGAAGAAATGGAACGTGCAACTCACGCCCCACTCCATTTCCTCCT
AAAAGCAACTCCACAAGGCCTTCGTGGCCTAGTTTGCGGCACAATGGGAGACTCAACACTCAGCCCAGTATTTGCTCGCGATAAGGCAGAAGGCAGGGGAAAGCATGAGG
GACTACGTAAGGAGGTTCCTCGCTGCGTAGATCACGGTAACTTACAAGGAGGAGTTCGCATGCTCGGTGTTCGCCTCGGGGGTTCGACACGAGCAGCTGAAGTGAAGCAG
GACCTGAAGTGCGGACGACCTGAAAGGTATGACCGCTTTACACTTTTGAACGAGCCGATGGCTGAAATTCTCGCCAACATACAAGACTTGAAGCTCGACCTACTCATTGA
GCCTAACCTTAGGCGTCGAGACCCCGAGAAGCGCAACCGATCAAAGTTCTACCATTTCCACAAGGACCACGACCATAACACCTCCGACTGCCACACCTGA
Protein sequenceShow/hide protein sequence
MDFHADLDVMMCRALSVTIGVREEMERATHAPLHFLLKATPQGLRGLVCGTMGDSTLSPVFARDKAEGRGKHEGLRKEVPRCVDHGNLQGGVRMLGVRLGGSTRAAEVKQ
DLKCGRPERYDRFTLLNEPMAEILANIQDLKLDLLIEPNLRRRDPEKRNRSKFYHFHKDHDHNTSDCHT