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Moc09g31370 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g31370
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr9:23726760..23729854
RNA-Seq ExpressionMoc09g31370
SyntenyMoc09g31370
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016020 - membrane (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143495.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia]2.1e-9792.59Show/hide
Query:  MLVSHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDIRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYI
        MLV HQLRGEWETRDVKLLPYKQLITELSQEFDE+SFDYLPRENNQV DALATLAVMFNLELNED+ PIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYI
Subjt:  MLVSHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDIRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYI

Query:  KSKEYPPNASENDKRTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGRYANRIMEAVHERVCGTHANGHMMARQILRAGYYWLTIETDCV
         SKEYPPNASENDKRT RKLAMKFFLNGEILYKRNHDMVLLRCVEGR ANRIME VHE VC THANGHM+ARQILRAGYYWLTI TDC+
Subjt:  KSKEYPPNASENDKRTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGRYANRIMEAVHERVCGTHANGHMMARQILRAGYYWLTIETDCV

XP_022147189.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]1.5e-10094.71Show/hide
Query:  MLVSHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDIRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYI
        MLV HQLRGEWETRDVKLLPYKQ ITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNED+RPIKVGRRDVPASCMSIEEEPDG PWFHDIKQYI
Subjt:  MLVSHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDIRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYI

Query:  KSKEYPPNASENDKRTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGRYANRIMEAVHERVCGTHANGHMMARQILRAGYYWLTIETDCV
        KSKEYPPNASENDKRTLRKLA+KFFLNGEILYKRNHDMVLLRCVEGR ANRIME +HE VCGTHANGHMMARQILRAGYYWLTIETDC+
Subjt:  KSKEYPPNASENDKRTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGRYANRIMEAVHERVCGTHANGHMMARQILRAGYYWLTIETDCV

XP_022150030.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111018303 [Momordica charantia]1.1e-9894.18Show/hide
Query:  MLVSHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDIRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYI
        MLV HQLRGEWE RDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNED+RPIKVGRRDV ASCMSIEEEPDGNPWFHDIKQYI
Subjt:  MLVSHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDIRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYI

Query:  KSKEYPPNASENDKRTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGRYANRIMEAVHERVCGTHANGHMMARQILRAGYYWLTIETDCV
        KSKEYPPNASENDKRTLRKLAMKFFLN EILYKRNHDMVLLRCVE R ANRIME VHE VCGTHANGHM+ARQILRAGYYWLTIETDC+
Subjt:  KSKEYPPNASENDKRTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGRYANRIMEAVHERVCGTHANGHMMARQILRAGYYWLTIETDCV

XP_022157796.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]8.9e-10196.28Show/hide
Query:  LVSHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDIRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYIK
        LV HQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNED+RPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYIK
Subjt:  LVSHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDIRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYIK

Query:  SKEYPPNASENDKRTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGRYANRIMEAVHERVCGTHANGHMMARQILRAGYYWLTIETDCV
        SKEY PNASENDKRTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGR ANRIME VHE VCGTHANGHMMARQILRAGYYWLTIETDC+
Subjt:  SKEYPPNASENDKRTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGRYANRIMEAVHERVCGTHANGHMMARQILRAGYYWLTIETDCV

XP_022158986.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia]1.3e-9994.71Show/hide
Query:  MLVSHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDIRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYI
        MLV HQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNED+ PIKVGRRDVPASCMSIEEEPDGNPWFH+IK YI
Subjt:  MLVSHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDIRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYI

Query:  KSKEYPPNASENDKRTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGRYANRIMEAVHERVCGTHANGHMMARQILRAGYYWLTIETDCV
        KSKEYPPNASENDKRTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGR ANRIME VHE VCGTHANGHMMARQILRAGYYWLTI TDC+
Subjt:  KSKEYPPNASENDKRTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGRYANRIMEAVHERVCGTHANGHMMARQILRAGYYWLTIETDCV

TrEMBL top hitse value%identityAlignment
A0A6J1CNY7 Ribonuclease H1.0e-9792.59Show/hide
Query:  MLVSHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDIRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYI
        MLV HQLRGEWETRDVKLLPYKQLITELSQEFDE+SFDYLPRENNQV DALATLAVMFNLELNED+ PIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYI
Subjt:  MLVSHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDIRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYI

Query:  KSKEYPPNASENDKRTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGRYANRIMEAVHERVCGTHANGHMMARQILRAGYYWLTIETDCV
         SKEYPPNASENDKRT RKLAMKFFLNGEILYKRNHDMVLLRCVEGR ANRIME VHE VC THANGHM+ARQILRAGYYWLTI TDC+
Subjt:  KSKEYPPNASENDKRTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGRYANRIMEAVHERVCGTHANGHMMARQILRAGYYWLTIETDCV

A0A6J1D099 Ribonuclease H7.4e-10194.71Show/hide
Query:  MLVSHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDIRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYI
        MLV HQLRGEWETRDVKLLPYKQ ITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNED+RPIKVGRRDVPASCMSIEEEPDG PWFHDIKQYI
Subjt:  MLVSHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDIRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYI

Query:  KSKEYPPNASENDKRTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGRYANRIMEAVHERVCGTHANGHMMARQILRAGYYWLTIETDCV
        KSKEYPPNASENDKRTLRKLA+KFFLNGEILYKRNHDMVLLRCVEGR ANRIME +HE VCGTHANGHMMARQILRAGYYWLTIETDC+
Subjt:  KSKEYPPNASENDKRTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGRYANRIMEAVHERVCGTHANGHMMARQILRAGYYWLTIETDCV

A0A6J1D7C7 Ribonuclease H5.3e-9994.18Show/hide
Query:  MLVSHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDIRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYI
        MLV HQLRGEWE RDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNED+RPIKVGRRDV ASCMSIEEEPDGNPWFHDIKQYI
Subjt:  MLVSHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDIRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYI

Query:  KSKEYPPNASENDKRTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGRYANRIMEAVHERVCGTHANGHMMARQILRAGYYWLTIETDCV
        KSKEYPPNASENDKRTLRKLAMKFFLN EILYKRNHDMVLLRCVE R ANRIME VHE VCGTHANGHM+ARQILRAGYYWLTIETDC+
Subjt:  KSKEYPPNASENDKRTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGRYANRIMEAVHERVCGTHANGHMMARQILRAGYYWLTIETDCV

A0A6J1DZ90 Ribonuclease H4.3e-10196.28Show/hide
Query:  LVSHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDIRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYIK
        LV HQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNED+RPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYIK
Subjt:  LVSHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDIRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYIK

Query:  SKEYPPNASENDKRTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGRYANRIMEAVHERVCGTHANGHMMARQILRAGYYWLTIETDCV
        SKEY PNASENDKRTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGR ANRIME VHE VCGTHANGHMMARQILRAGYYWLTIETDC+
Subjt:  SKEYPPNASENDKRTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGRYANRIMEAVHERVCGTHANGHMMARQILRAGYYWLTIETDCV

A0A6J1E2J7 Ribonuclease H6.2e-10094.71Show/hide
Query:  MLVSHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDIRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYI
        MLV HQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNED+ PIKVGRRDVPASCMSIEEEPDGNPWFH+IK YI
Subjt:  MLVSHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDIRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYI

Query:  KSKEYPPNASENDKRTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGRYANRIMEAVHERVCGTHANGHMMARQILRAGYYWLTIETDCV
        KSKEYPPNASENDKRTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGR ANRIME VHE VCGTHANGHMMARQILRAGYYWLTI TDC+
Subjt:  KSKEYPPNASENDKRTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGRYANRIMEAVHERVCGTHANGHMMARQILRAGYYWLTIETDCV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAGTAAGTCATCAACTAAGAGGAGAATGGGAAACAAGAGACGTTAAGTTGTTGCCTTATAAACAACTCATAACAGAATTGTCACAAGAATTTGATGAAATCTCATT
TGATTATTTGCCAAGAGAAAATAATCAAGTAGCAGATGCATTGGCCACATTAGCGGTGATGTTCAATTTAGAACTTAATGAGGATATCCGTCCGATTAAAGTTGGGAGGA
GAGATGTCCCAGCTTCTTGTATGAGCATTGAGGAAGAACCCGACGGTAACCCCTGGTTTCATGACATCAAGCAATATATAAAGAGTAAAGAGTATCCACCAAATGCTTCA
GAAAATGATAAACGCACCCTTCGCAAGTTGGCAATGAAGTTTTTCTTAAACGGAGAGATACTATACAAGAGAAACCATGACATGGTTCTCCTAAGGTGCGTCGAAGGAAG
ATATGCCAATAGGATTATGGAAGCAGTTCATGAAAGAGTTTGTGGCACTCATGCAAATGGACACATGATGGCTAGACAAATTTTAAGAGCTGGCTATTACTGGCTGACTA
TAGAGACAGATTGTGTATTTAAGGAGGGCTGCAGTGGGGAGGAGAAGATAGACAGAACACCCAAGAATTCACTTCCTTCTTTCTCTCTACCATCACCTTCTCTTCCTCTT
CACCCAGGCCAGCACCCCCGACGATACACAGACTACACACGTCCCCCGATGATCACAAGTTCAGACCAACCTGCACCACAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTAGTAAGTCATCAACTAAGAGGAGAATGGGAAACAAGAGACGTTAAGTTGTTGCCTTATAAACAACTCATAACAGAATTGTCACAAGAATTTGATGAAATCTCATT
TGATTATTTGCCAAGAGAAAATAATCAAGTAGCAGATGCATTGGCCACATTAGCGGTGATGTTCAATTTAGAACTTAATGAGGATATCCGTCCGATTAAAGTTGGGAGGA
GAGATGTCCCAGCTTCTTGTATGAGCATTGAGGAAGAACCCGACGGTAACCCCTGGTTTCATGACATCAAGCAATATATAAAGAGTAAAGAGTATCCACCAAATGCTTCA
GAAAATGATAAACGCACCCTTCGCAAGTTGGCAATGAAGTTTTTCTTAAACGGAGAGATACTATACAAGAGAAACCATGACATGGTTCTCCTAAGGTGCGTCGAAGGAAG
ATATGCCAATAGGATTATGGAAGCAGTTCATGAAAGAGTTTGTGGCACTCATGCAAATGGACACATGATGGCTAGACAAATTTTAAGAGCTGGCTATTACTGGCTGACTA
TAGAGACAGATTGTGTATTTAAGGAGGGCTGCAGTGGGGAGGAGAAGATAGACAGAACACCCAAGAATTCACTTCCTTCTTTCTCTCTACCATCACCTTCTCTTCCTCTT
CACCCAGGCCAGCACCCCCGACGATACACAGACTACACACGTCCCCCGATGATCACAAGTTCAGACCAACCTGCACCACAGTAG
Protein sequenceShow/hide protein sequence
MLVSHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDIRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYIKSKEYPPNAS
ENDKRTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGRYANRIMEAVHERVCGTHANGHMMARQILRAGYYWLTIETDCVFKEGCSGEEKIDRTPKNSLPSFSLPSPSLPL
HPGQHPRRYTDYTRPPMITSSDQPAPQ