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Moc09g31400 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g31400
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr9:23734365..23734655
RNA-Seq ExpressionMoc09g31400
SyntenyMoc09g31400
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147189.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]3.0e-0492.31Show/hide
Query:  MPQYTTYNLLYDVPVGQYPHPFVKGA
        MPQYTTYN LYDVPVGQY HPFVKGA
Subjt:  MPQYTTYNLLYDVPVGQYPHPFVKGA

XP_022147190.1 uncharacterized protein LOC111016201 [Momordica charantia]9.7e-1996.43Show/hide
Query:  MMEDQKAEQEKTRKDIEELREKLDAILLALEKGKAAADPATSSNPVHEPQETPPYP
        MMEDQKAEQEKTRKDIEELREKLD ILLALEKGK+AADPATSSNPVHEPQETPPYP
Subjt:  MMEDQKAEQEKTRKDIEELREKLDAILLALEKGKAAADPATSSNPVHEPQETPPYP

XP_022149382.1 uncharacterized protein LOC111017812 [Momordica charantia]2.9e-3180.85Show/hide
Query:  MEDQKAEQEKTRKDIEELREKLDAILLALEKGKAAADPATSSNPVHEPQETPPYPPGYGPPLRPVAEGFMPQYTTYNLLYDVPVGQYPHPFVKG
        M+DQKAEQEK RKDIEELREKLD ILLALEKGK  ADP TSSNPVH+ QE PPYP GY PPLR VAEGFM Q TTYN LYD+ VGQYP PFVKG
Subjt:  MEDQKAEQEKTRKDIEELREKLDAILLALEKGKAAADPATSSNPVHEPQETPPYPPGYGPPLRPVAEGFMPQYTTYNLLYDVPVGQYPHPFVKG

XP_022155098.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica charantia]4.5e-2464.71Show/hide
Query:  MMEDQKAEQEKTRKDIEELREKLDAILLALEKGKAAADPATSSNPVHEPQETPPYPPGY-------GPPLRPVAEGFMPQYTTYNLLYDVPVGQYPHPFV
        M +D+K+EQEKTRKDIEELREKLDAILLALEKGK  A+   +SNP+HEP  TP +PPG+       GP  RP+ EGFM QYTTYN LYD+P GQ+P P V
Subjt:  MMEDQKAEQEKTRKDIEELREKLDAILLALEKGKAAADPATSSNPVHEPQETPPYPPGY-------GPPLRPVAEGFMPQYTTYNLLYDVPVGQYPHPFV

Query:  KG
        +G
Subjt:  KG

XP_022157796.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]5.3e-4191.58Show/hide
Query:  MEDQKAEQEKTRKDIEELREKLDAILLALEKGKAAADPATSSNPVHEPQETPPYPPGYGPPLRPVAEGFMPQYTTYNLLYDVPVGQYPHPFVKGA
        MEDQKAEQEKTRKDIEELREKLD I L LEKGKA ADPATSSNP+HEPQETPPYPPGYGPPLRPVAEGFMPQYTTYN LYDVP+GQYPH FVKGA
Subjt:  MEDQKAEQEKTRKDIEELREKLDAILLALEKGKAAADPATSSNPVHEPQETPPYPPGYGPPLRPVAEGFMPQYTTYNLLYDVPVGQYPHPFVKGA

TrEMBL top hitse value%identityAlignment
A0A6J1CZG4 uncharacterized protein LOC1110162014.7e-1996.43Show/hide
Query:  MMEDQKAEQEKTRKDIEELREKLDAILLALEKGKAAADPATSSNPVHEPQETPPYP
        MMEDQKAEQEKTRKDIEELREKLD ILLALEKGK+AADPATSSNPVHEPQETPPYP
Subjt:  MMEDQKAEQEKTRKDIEELREKLDAILLALEKGKAAADPATSSNPVHEPQETPPYP

A0A6J1D099 Ribonuclease H1.5e-0492.31Show/hide
Query:  MPQYTTYNLLYDVPVGQYPHPFVKGA
        MPQYTTYN LYDVPVGQY HPFVKGA
Subjt:  MPQYTTYNLLYDVPVGQYPHPFVKGA

A0A6J1D7T3 uncharacterized protein LOC1110178121.4e-3180.85Show/hide
Query:  MEDQKAEQEKTRKDIEELREKLDAILLALEKGKAAADPATSSNPVHEPQETPPYPPGYGPPLRPVAEGFMPQYTTYNLLYDVPVGQYPHPFVKG
        M+DQKAEQEK RKDIEELREKLD ILLALEKGK  ADP TSSNPVH+ QE PPYP GY PPLR VAEGFM Q TTYN LYD+ VGQYP PFVKG
Subjt:  MEDQKAEQEKTRKDIEELREKLDAILLALEKGKAAADPATSSNPVHEPQETPPYPPGYGPPLRPVAEGFMPQYTTYNLLYDVPVGQYPHPFVKG

A0A6J1DM29 LOW QUALITY PROTEIN: uncharacterized protein LOC1110222312.2e-2464.71Show/hide
Query:  MMEDQKAEQEKTRKDIEELREKLDAILLALEKGKAAADPATSSNPVHEPQETPPYPPGY-------GPPLRPVAEGFMPQYTTYNLLYDVPVGQYPHPFV
        M +D+K+EQEKTRKDIEELREKLDAILLALEKGK  A+   +SNP+HEP  TP +PPG+       GP  RP+ EGFM QYTTYN LYD+P GQ+P P V
Subjt:  MMEDQKAEQEKTRKDIEELREKLDAILLALEKGKAAADPATSSNPVHEPQETPPYPPGY-------GPPLRPVAEGFMPQYTTYNLLYDVPVGQYPHPFV

Query:  KG
        +G
Subjt:  KG

A0A6J1DZ90 Ribonuclease H2.6e-4191.58Show/hide
Query:  MEDQKAEQEKTRKDIEELREKLDAILLALEKGKAAADPATSSNPVHEPQETPPYPPGYGPPLRPVAEGFMPQYTTYNLLYDVPVGQYPHPFVKGA
        MEDQKAEQEKTRKDIEELREKLD I L LEKGKA ADPATSSNP+HEPQETPPYPPGYGPPLRPVAEGFMPQYTTYN LYDVP+GQYPH FVKGA
Subjt:  MEDQKAEQEKTRKDIEELREKLDAILLALEKGKAAADPATSSNPVHEPQETPPYPPGYGPPLRPVAEGFMPQYTTYNLLYDVPVGQYPHPFVKGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAAGATCAAAAAGCCGAGCAGGAGAAAACAAGGAAAGATATTGAGGAGTTGCGAGAAAAGTTAGATGCCATCCTCCTCGCGTTGGAAAAAGGCAAAGCGGCTGC
AGATCCTGCTACATCTAGCAACCCTGTTCATGAGCCGCAAGAAACCCCGCCTTATCCACCTGGGTACGGTCCACCTCTTAGGCCAGTGGCAGAGGGTTTCATGCCACAAT
ATACAACGTACAACCTTCTGTATGACGTCCCAGTTGGTCAGTATCCGCATCCCTTTGTTAAGGGAGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGGAAGATCAAAAAGCCGAGCAGGAGAAAACAAGGAAAGATATTGAGGAGTTGCGAGAAAAGTTAGATGCCATCCTCCTCGCGTTGGAAAAAGGCAAAGCGGCTGC
AGATCCTGCTACATCTAGCAACCCTGTTCATGAGCCGCAAGAAACCCCGCCTTATCCACCTGGGTACGGTCCACCTCTTAGGCCAGTGGCAGAGGGTTTCATGCCACAAT
ATACAACGTACAACCTTCTGTATGACGTCCCAGTTGGTCAGTATCCGCATCCCTTTGTTAAGGGAGCTTAG
Protein sequenceShow/hide protein sequence
MMEDQKAEQEKTRKDIEELREKLDAILLALEKGKAAADPATSSNPVHEPQETPPYPPGYGPPLRPVAEGFMPQYTTYNLLYDVPVGQYPHPFVKGA