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Moc09g32130 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g32130
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description40S ribosomal protein S26
Genome locationchr9:24306995..24308360
RNA-Seq ExpressionMoc09g32130
SyntenyMoc09g32130
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0019430 - removal of superoxide radicals (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0004784 - superoxide dismutase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000892 - Ribosomal protein S26e
IPR038551 - Ribosomal protein S26e superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146441.1 40S ribosomal protein S26-1 [Cucumis sativus]1.0e-4396.91Show/hide
Query:  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLARV
        DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQ KPGQPGQ PRPVGAGN ARV
Subjt:  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLARV

XP_022146746.1 40S ribosomal protein S26-1 [Momordica charantia]4.8e-46100Show/hide
Query:  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLARV
        DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLARV
Subjt:  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLARV

XP_022941874.1 40S ribosomal protein S26-3-like [Cucurbita moschata]1.9e-4293Show/hide
Query:  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPK---PGQPGQTPRPVGAGNLARV
        DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF+RRR+DQPK   PGQPGQ PRPVGAGN ARV
Subjt:  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPK---PGQPGQTPRPVGAGNLARV

XP_022943123.1 40S ribosomal protein S26-1-like [Cucurbita moschata]8.4e-4394.85Show/hide
Query:  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLARV
        DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRR+DQPKPGQPGQ PRP GAG  ARV
Subjt:  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLARV

XP_023529394.1 40S ribosomal protein S26-1-like [Cucurbita pepo subsp. pepo]8.4e-4394.85Show/hide
Query:  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLARV
        DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRR+DQPKPGQPGQ PRP GAG  ARV
Subjt:  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLARV

TrEMBL top hitse value%identityAlignment
A0A0A0KM45 40S ribosomal protein S264.8e-4496.91Show/hide
Query:  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLARV
        DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQ KPGQPGQ PRPVGAGN ARV
Subjt:  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLARV

A0A1S3C5M1 40S ribosomal protein S264.8e-4496.91Show/hide
Query:  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLARV
        DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQ KPGQPGQ PRPVGAGN ARV
Subjt:  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLARV

A0A5A7VIJ0 40S ribosomal protein S264.8e-4496.91Show/hide
Query:  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLARV
        DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQ KPGQPGQ PRPVGAGN ARV
Subjt:  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLARV

A0A6J1D0A2 40S ribosomal protein S262.3e-46100Show/hide
Query:  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLARV
        DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLARV
Subjt:  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLARV

A0A6J1JIN0 40S ribosomal protein S264.1e-4394.85Show/hide
Query:  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLARV
        DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRR+DQPKPGQPGQ PRP GAG  ARV
Subjt:  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLARV

SwissProt top hitse value%identityAlignment
O93931 40S ribosomal protein S265.0e-2271.83Show/hide
Query:  VATDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        VA DKAIKRF VRN+VE AA+RD+ +A VY +Y +PKLY K+ YCVSCAIHSHVVRVRSR  RRNR PP R
Subjt:  VATDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

P49206 40S ribosomal protein S26-11.6e-3681.05Show/hide
Query:  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLA
        DKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF RR+ED PKPGQPGQ PRP G G  A
Subjt:  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLA

P49216 40S ribosomal protein S262.1e-2868.32Show/hide
Query:  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPKPGQP-GQTPRPVGAG----NLA
        DKAIKRF VRNIVEQAA+RDVQEACV+D Y LPKLYAK+ +CVSCAIH+H+VRVRSR +RR+R+PP+RF RRRED+P+  +P G  P P GA     N+A
Subjt:  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPKPGQP-GQTPRPVGAG----NLA

Query:  R
        R
Subjt:  R

Q8LPJ7 40S ribosomal protein S26-21.6e-3681.05Show/hide
Query:  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLA
        DKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF RR+ED PKPGQPGQ PRP G G  A
Subjt:  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLA

Q9LYK9 40S ribosomal protein S26-33.0e-3578.95Show/hide
Query:  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLA
        DKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF RR+ED PKP QPGQ PRP G    A
Subjt:  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLA

Arabidopsis top hitse value%identityAlignment
AT2G40510.1 Ribosomal protein S26e family protein1.1e-3781.05Show/hide
Query:  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLA
        DKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF RR+ED PKPGQPGQ PRP G G  A
Subjt:  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLA

AT2G40590.1 Ribosomal protein S26e family protein1.1e-3781.05Show/hide
Query:  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLA
        DKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF RR+ED PKPGQPGQ PRP G G  A
Subjt:  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLA

AT3G56340.1 Ribosomal protein S26e family protein2.1e-3678.95Show/hide
Query:  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLA
        DKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF RR+ED PKP QPGQ PRP G    A
Subjt:  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGTCGGCCACTCCGCCTCACGATGACGTTGCGACAGACAAGGCCATTAAGAGGTTTTTGGTAAGGAACATTGTGGAGCAGGCTGCTGTTAGGGATGTCCAAGAAGC
CTGTGTCTATGATCAATATACTCTCCCTAAGCTTTATGCTAAGATGCAGTACTGTGTTTCCTGTGCCATTCACTCACATGTTGTGAGAGTTCGTTCTCGTACGGATAGAA
GAAATCGGCAACCACCACAGCGCTTCATTAGACGCAGGGAGGATCAGCCAAAGCCTGGCCAGCCTGGTCAAACACCTCGTCCTGTTGGAGCCGGAAATCTTGCTCGTGTA
TGA
mRNA sequenceShow/hide mRNA sequence
ATGACGTCGGCCACTCCGCCTCACGATGACGTTGCGACAGACAAGGCCATTAAGAGGTTTTTGGTAAGGAACATTGTGGAGCAGGCTGCTGTTAGGGATGTCCAAGAAGC
CTGTGTCTATGATCAATATACTCTCCCTAAGCTTTATGCTAAGATGCAGTACTGTGTTTCCTGTGCCATTCACTCACATGTTGTGAGAGTTCGTTCTCGTACGGATAGAA
GAAATCGGCAACCACCACAGCGCTTCATTAGACGCAGGGAGGATCAGCCAAAGCCTGGCCAGCCTGGTCAAACACCTCGTCCTGTTGGAGCCGGAAATCTTGCTCGTGTA
TGA
Protein sequenceShow/hide protein sequence
MTSATPPHDDVATDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLARV