; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g32950 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g32950
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr9:24999389..25005906
RNA-Seq ExpressionMoc09g32950
SyntenyMoc09g32950
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602145.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]2.4e-11580.08Show/hide
Query:  MCLLLKKLVGAHRASISLYSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKG
        M  LLK L GAHRAS   YS LIDQCLA RSVHIAKTIHAQL+KLGLNNNTFLGNRCLQLY LFGPVHE  +VF DIKEKN++SWNICLKGLFRFG + G
Subjt:  MCLLLKKLVGAHRASISLYSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKG

Query:  ACQLFDEMTERDTVSWNSMISGYVSSGFGDSAMAVFLEMQNAGFRSSEYTFSILLSLVSCTRHGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYM
        A  LFDEM ERD VSWN M+SG VSSGF + AM VFLEMQ+AGFR SEYTFSILLS+VSC  HGKQIHGSMIRSGVDVS+VVLGNSLIDMYGK GLVDYM
Subjt:  ACQLFDEMTERDTVSWNSMISGYVSSGFGDSAMAVFLEMQNAGFRSSEYTFSILLSLVSCTRHGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYM

Query:  FAIFFTMEKVDVISWNSLILGCHRSGFRVLALNQFSLMRTTEHSPDEFTVSIVMSVCCGLQAFDLG
        F +F++MEKVDVISWNSLILGCHRSGFRVLALNQF LMR T HSPD+FTVSI++SVC  LQ  +LG
Subjt:  FAIFFTMEKVDVISWNSLILGCHRSGFRVLALNQFSLMRTTEHSPDEFTVSIVMSVCCGLQAFDLG

KAG7032835.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-11580.08Show/hide
Query:  MCLLLKKLVGAHRASISLYSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKG
        M  LLK L GAHRAS   YS LIDQCLA RSVHIAKTIHAQL+KLGLNNNTFLGNRCLQLY LFGPVHE  +VF DIKEKN++SWNICLKGLFRFG + G
Subjt:  MCLLLKKLVGAHRASISLYSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKG

Query:  ACQLFDEMTERDTVSWNSMISGYVSSGFGDSAMAVFLEMQNAGFRSSEYTFSILLSLVSCTRHGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYM
        A  LFDEM ERD VSWN M+SG VSSGF + AM VFLEMQ+AGFR SEYTFSILLS+VSC  HGKQIHGSMIRSGVDVS+VVLGNSLIDMYGK GLVDYM
Subjt:  ACQLFDEMTERDTVSWNSMISGYVSSGFGDSAMAVFLEMQNAGFRSSEYTFSILLSLVSCTRHGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYM

Query:  FAIFFTMEKVDVISWNSLILGCHRSGFRVLALNQFSLMRTTEHSPDEFTVSIVMSVCCGLQAFDLG
        F +F++MEKVDVISWNSLILGCHRSGFRVLALNQF LMR T HSPD+FTVSI++SVC  LQ  +LG
Subjt:  FAIFFTMEKVDVISWNSLILGCHRSGFRVLALNQFSLMRTTEHSPDEFTVSIVMSVCCGLQAFDLG

XP_022146799.1 pentatricopeptide repeat-containing protein At1g43980, mitochondrial-like [Momordica charantia]8.2e-14897.79Show/hide
Query:  MCLLLKKLVGAHRASISLYSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKG
        MCLLLKKLVGAHRASISLYSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKN ISWNICLKGLF+FGDIKG
Subjt:  MCLLLKKLVGAHRASISLYSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKG

Query:  ACQLFDEMTERDTVSWNSMISGYVSSGFGDSAMAVFLEMQNAGFRSSEYTFSILLSLVSCTRHGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYM
        ACQLFDEMTERDTVSWNSMISGYVSSGFGDSAMAVFL+MQNAGFRSSEYTFSIL+SLVSCTRHGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYM
Subjt:  ACQLFDEMTERDTVSWNSMISGYVSSGFGDSAMAVFLEMQNAGFRSSEYTFSILLSLVSCTRHGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYM

Query:  FAIFFTMEKVDVISWNSLILGCHRSGFRVLALNQFSLMRTTEHSPDEFTVSIVMSVCCGLQAFDLGFSAAF
        FAIFFTMEKVDVISWNSLILGCHRSGFRVLALNQFSLMRTTEHSPDEFTVS VMSVCCGLQAFD GFSAAF
Subjt:  FAIFFTMEKVDVISWNSLILGCHRSGFRVLALNQFSLMRTTEHSPDEFTVSIVMSVCCGLQAFDLGFSAAF

XP_022146876.1 pentatricopeptide repeat-containing protein At1g43980, mitochondrial-like, partial [Momordica charantia]6.3e-148100Show/hide
Query:  MCLLLKKLVGAHRASISLYSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKG
        MCLLLKKLVGAHRASISLYSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKG
Subjt:  MCLLLKKLVGAHRASISLYSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKG

Query:  ACQLFDEMTERDTVSWNSMISGYVSSGFGDSAMAVFLEMQNAGFRSSEYTFSILLSLVSCTRHGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYM
        ACQLFDEMTERDTVSWNSMISGYVSSGFGDSAMAVFLEMQNAGFRSSEYTFSILLSLVSCTRHGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYM
Subjt:  ACQLFDEMTERDTVSWNSMISGYVSSGFGDSAMAVFLEMQNAGFRSSEYTFSILLSLVSCTRHGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYM

Query:  FAIFFTMEKVDVISWNSLILGCHRSGFRVLALNQFSLMRTTEHSPDEFTVSIVMSVCCGLQAFDLG
        FAIFFTMEKVDVISWNSLILGCHRSGFRVLALNQFSLMRTTEHSPDEFTVSIVMSVCCGLQAFDLG
Subjt:  FAIFFTMEKVDVISWNSLILGCHRSGFRVLALNQFSLMRTTEHSPDEFTVSIVMSVCCGLQAFDLG

XP_022989781.1 pentatricopeptide repeat-containing protein At1g43980, mitochondrial [Cucurbita maxima]9.1e-11579.32Show/hide
Query:  MCLLLKKLVGAHRASISLYSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKG
        M  LLK L GAHRAS S YS LIDQCLA  SVHIAKTIHAQL+KLGLNNNTFLGNRCLQLY LFGPVHE  +VF DIKEKN++SWNICLKGLFRFG + G
Subjt:  MCLLLKKLVGAHRASISLYSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKG

Query:  ACQLFDEMTERDTVSWNSMISGYVSSGFGDSAMAVFLEMQNAGFRSSEYTFSILLSLVSCTRHGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYM
        A  LFDEM ERD VSWN M+SG VSSGF + AM VFLEMQ+AGFR SEYTFSILLS+VSC  HGKQIHGSMIRSG+DVS+VVLGNSLIDMYGK GLVDYM
Subjt:  ACQLFDEMTERDTVSWNSMISGYVSSGFGDSAMAVFLEMQNAGFRSSEYTFSILLSLVSCTRHGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYM

Query:  FAIFFTMEKVDVISWNSLILGCHRSGFRVLALNQFSLMRTTEHSPDEFTVSIVMSVCCGLQAFDLG
        F +F++MEKVDVISWNSLILGCHRSGFRVLALNQF LMR T HSPD+FTVSI++S+C  LQ  +LG
Subjt:  FAIFFTMEKVDVISWNSLILGCHRSGFRVLALNQFSLMRTTEHSPDEFTVSIVMSVCCGLQAFDLG

TrEMBL top hitse value%identityAlignment
A0A1S3B3Q8 pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X19.2e-11377.44Show/hide
Query:  MCLLLKKLVGAHRASISLYSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKG
        M L L KL+GAH+A +S YS LI QCL + SVH AKTIHAQL+KLGL++NTFLGN CLQLY LFGPVH+VLK F  IK+KN+ISWNICLKG+FRFGD+  
Subjt:  MCLLLKKLVGAHRASISLYSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKG

Query:  ACQLFDEMTERDTVSWNSMISGYVSSGFGDSAMAVFLEMQNAGFRSSEYTFSILLSLVSCTRHGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYM
           LFD M ERD VSWN+MISGYVSSGF  SAM + LEMQNAGFR SEYTFSILLSLVS   HGKQ+HGSMIRSGVDVSS+VLGNSLIDMYGKVGLVDYM
Subjt:  ACQLFDEMTERDTVSWNSMISGYVSSGFGDSAMAVFLEMQNAGFRSSEYTFSILLSLVSCTRHGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYM

Query:  FAIFFTMEKVDVISWNSLILGCHRSGFRVLALNQFSLMRTTEHSPDEFTVSIVMSVCCGLQAFDLG
        F IF +MEKVDVISWNSLILGCHRSGFRVLALNQF LMRTTEHSPD+FT+S+V+S+CC LQ  +LG
Subjt:  FAIFFTMEKVDVISWNSLILGCHRSGFRVLALNQFSLMRTTEHSPDEFTVSIVMSVCCGLQAFDLG

A0A6J1CZ40 pentatricopeptide repeat-containing protein At1g43980, mitochondrial-like4.0e-14897.79Show/hide
Query:  MCLLLKKLVGAHRASISLYSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKG
        MCLLLKKLVGAHRASISLYSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKN ISWNICLKGLF+FGDIKG
Subjt:  MCLLLKKLVGAHRASISLYSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKG

Query:  ACQLFDEMTERDTVSWNSMISGYVSSGFGDSAMAVFLEMQNAGFRSSEYTFSILLSLVSCTRHGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYM
        ACQLFDEMTERDTVSWNSMISGYVSSGFGDSAMAVFL+MQNAGFRSSEYTFSIL+SLVSCTRHGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYM
Subjt:  ACQLFDEMTERDTVSWNSMISGYVSSGFGDSAMAVFLEMQNAGFRSSEYTFSILLSLVSCTRHGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYM

Query:  FAIFFTMEKVDVISWNSLILGCHRSGFRVLALNQFSLMRTTEHSPDEFTVSIVMSVCCGLQAFDLGFSAAF
        FAIFFTMEKVDVISWNSLILGCHRSGFRVLALNQFSLMRTTEHSPDEFTVS VMSVCCGLQAFD GFSAAF
Subjt:  FAIFFTMEKVDVISWNSLILGCHRSGFRVLALNQFSLMRTTEHSPDEFTVSIVMSVCCGLQAFDLGFSAAF

A0A6J1D0P4 pentatricopeptide repeat-containing protein At1g43980, mitochondrial-like3.0e-148100Show/hide
Query:  MCLLLKKLVGAHRASISLYSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKG
        MCLLLKKLVGAHRASISLYSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKG
Subjt:  MCLLLKKLVGAHRASISLYSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKG

Query:  ACQLFDEMTERDTVSWNSMISGYVSSGFGDSAMAVFLEMQNAGFRSSEYTFSILLSLVSCTRHGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYM
        ACQLFDEMTERDTVSWNSMISGYVSSGFGDSAMAVFLEMQNAGFRSSEYTFSILLSLVSCTRHGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYM
Subjt:  ACQLFDEMTERDTVSWNSMISGYVSSGFGDSAMAVFLEMQNAGFRSSEYTFSILLSLVSCTRHGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYM

Query:  FAIFFTMEKVDVISWNSLILGCHRSGFRVLALNQFSLMRTTEHSPDEFTVSIVMSVCCGLQAFDLG
        FAIFFTMEKVDVISWNSLILGCHRSGFRVLALNQFSLMRTTEHSPDEFTVSIVMSVCCGLQAFDLG
Subjt:  FAIFFTMEKVDVISWNSLILGCHRSGFRVLALNQFSLMRTTEHSPDEFTVSIVMSVCCGLQAFDLG

A0A6J1GNQ4 pentatricopeptide repeat-containing protein At1g43980, mitochondrial2.9e-11478.95Show/hide
Query:  MCLLLKKLVGAHRASISLYSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKG
        M  LLK L GAHRAS S YS LIDQCLA RSVHIAKTIHAQL+KLGLNNNTFLGNRCLQLY LFGPVH+  +VF DIKEKN++SWNICLKGLFRFG + G
Subjt:  MCLLLKKLVGAHRASISLYSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKG

Query:  ACQLFDEMTERDTVSWNSMISGYVSSGFGDSAMAVFLEMQNAGFRSSEYTFSILLSLVSCTRHGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYM
        A  LFDEM ERD VSWN M+SG VSSGF + AM VFLEMQ+AGFR SEYTFSILLS++SC  HGKQIHGSMIRSGVDVS+VVLGNSLIDMYGK GLVDYM
Subjt:  ACQLFDEMTERDTVSWNSMISGYVSSGFGDSAMAVFLEMQNAGFRSSEYTFSILLSLVSCTRHGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYM

Query:  FAIFFTMEKVDVISWNSLILGCHRSGFRVLALNQFSLMRTTEHSPDEFTVSIVMSVCCGLQAFDLG
        F +F++MEKVDVISWNSLILGCHRSGF VLALNQF LMR T HSPD+FTVSI++S+C  LQ  +LG
Subjt:  FAIFFTMEKVDVISWNSLILGCHRSGFRVLALNQFSLMRTTEHSPDEFTVSIVMSVCCGLQAFDLG

A0A6J1JL44 pentatricopeptide repeat-containing protein At1g43980, mitochondrial4.4e-11579.32Show/hide
Query:  MCLLLKKLVGAHRASISLYSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKG
        M  LLK L GAHRAS S YS LIDQCLA  SVHIAKTIHAQL+KLGLNNNTFLGNRCLQLY LFGPVHE  +VF DIKEKN++SWNICLKGLFRFG + G
Subjt:  MCLLLKKLVGAHRASISLYSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKG

Query:  ACQLFDEMTERDTVSWNSMISGYVSSGFGDSAMAVFLEMQNAGFRSSEYTFSILLSLVSCTRHGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYM
        A  LFDEM ERD VSWN M+SG VSSGF + AM VFLEMQ+AGFR SEYTFSILLS+VSC  HGKQIHGSMIRSG+DVS+VVLGNSLIDMYGK GLVDYM
Subjt:  ACQLFDEMTERDTVSWNSMISGYVSSGFGDSAMAVFLEMQNAGFRSSEYTFSILLSLVSCTRHGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYM

Query:  FAIFFTMEKVDVISWNSLILGCHRSGFRVLALNQFSLMRTTEHSPDEFTVSIVMSVCCGLQAFDLG
        F +F++MEKVDVISWNSLILGCHRSGFRVLALNQF LMR T HSPD+FTVSI++S+C  LQ  +LG
Subjt:  FAIFFTMEKVDVISWNSLILGCHRSGFRVLALNQFSLMRTTEHSPDEFTVSIVMSVCCGLQAFDLG

SwissProt top hitse value%identityAlignment
O23169 Pentatricopeptide repeat-containing protein At4g371705.7e-3533.46Show/hide
Query:  AHRASISLYSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKGACQLFDEMTE
        A +   S Y  LI  C   R++   K +H  +   G      + NR L++Y   G + +  KVF ++  +++ SWN+ + G    G ++ A +LFDEMTE
Subjt:  AHRASISLYSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKGACQLFDEMTE

Query:  RDTVSWNSMISGYVSSGFGDSAMAVFLEMQNA-GFRSSEYTFSILL---SLVSCTRHGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYMFAIFFT
        +D+ SW +M++GYV     + A+ ++  MQ     R + +T SI +   + V C R GK+IHG ++R+G+D S  VL +SL+DMYGK G +D    IF  
Subjt:  RDTVSWNSMISGYVSSGFGDSAMAVFLEMQNA-GFRSSEYTFSILL---SLVSCTRHGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYMFAIFFT

Query:  MEKVDVISWNSLILGCHRSGFRVLALNQFSLMRTTEHSPDEFTVSIVMSVCCGLQAFDLG
        + + DV+SW S+I    +S       + FS +  +   P+E+T + V++ C  L   +LG
Subjt:  MEKVDVISWNSLILGCHRSGFRVLALNQFSLMRTTEHSPDEFTVSIVMSVCCGLQAFDLG

O80488 Pentatricopeptide repeat-containing protein At1g091903.2e-3031.28Show/hide
Query:  YSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKGACQLFDEMTERDTVSWNS
        Y+ L+  C +L  +   K +H +L++ G +    +    ++LY   G + +  KVF ++ E+NV+ WN+ ++G    GD++    LF +M+ER  VSWNS
Subjt:  YSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKGACQLFDEMTERDTVSWNS

Query:  MISGYVSSGFGDSAMAVFLEMQNAGFRSSEYTFSILLSL---VSCTRHGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYMFAIFFTMEKVDVISW
        MIS     G    A+ +F EM + GF   E T   +L +   +     GK IH +   SG+    + +GN+L+D Y K G ++   AIF  M++ +V+SW
Subjt:  MISGYVSSGFGDSAMAVFLEMQNAGFRSSEYTFSILLSL---VSCTRHGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYMFAIFFTMEKVDVISW

Query:  NSLILGCHRSGFRVLALNQF-SLMRTTEHSPDEFTVSIVMSVC
        N+LI G   +G     ++ F +++   + +P+E T   V++ C
Subjt:  NSLILGCHRSGFRVLALNQF-SLMRTTEHSPDEFTVSIVMSVC

P0C8Q7 Pentatricopeptide repeat-containing protein At5g083055.5e-3031.17Show/hide
Query:  YSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKGACQLFDEMTERDTVSWNS
        Y  L+     L +  +  ++H  +VK GL  + F+ N  + +YG F       K+F ++  KN+++WN  L    + GD+  A  +FDEM+ERD V+W+S
Subjt:  YSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKGACQLFDEMTERDTVSWNS

Query:  MISGYVSSGFGDSAMAVFLEMQNAGFRSSEYTFSILLSLVSCTRH------GKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYMFAIFF--TMEKV
        MI GYV  G  + A+ +F +M   G  SS+     ++S++    H      GK +H  ++   + + +V+L  SLIDMY K G +   +++F+  ++++ 
Subjt:  MISGYVSSGFGDSAMAVFLEMQNAGFRSSEYTFSILLSLVSCTRH------GKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYMFAIFF--TMEKV

Query:  DVISWNSLILGCHRSGFRVLALNQFSLMRTTEHSPDEFTVSIVMSVC
        D + WN++I G    GF   +L  F  MR ++  PDE T   +++ C
Subjt:  DVISWNSLILGCHRSGFRVLALNQFSLMRTTEHSPDEFTVSIVMSVC

Q9LP03 Pentatricopeptide repeat-containing protein At1g43980, mitochondrial4.6e-6949.81Show/hide
Query:  MCLLLKKLVGAHRASISLYSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKG
        M  LL++  G    S   +S+L+++ L  +S  +AK +HAQL++ G    T+ GNRCLQLY   G V   L++F DI +KN I+WN+CLKGLF+ G +  
Subjt:  MCLLLKKLVGAHRASISLYSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKG

Query:  ACQLFDEMTERDTVSWNSMISGYVSSGFGDSAMAVFLEMQNAGFRSSEYTFSILLSLVSCTRHGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYM
        A  LFDEM ERD VSWN+MISG VS GF +  + VF +MQ    R +E+TFSIL SLV+C RHG+QIHG+ I SGV   ++V+ NS++DMY ++G+ DY 
Subjt:  ACQLFDEMTERDTVSWNSMISGYVSSGFGDSAMAVFLEMQNAGFRSSEYTFSILLSLVSCTRHGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYM

Query:  FAIFFTMEKVDVISWNSLILGCHRSGFRVLALNQFSLMRTTEHSPDEFTVSIVMSVCCGLQAFDLGFSA
         ++F TME  DV+SWN LIL C  SG + +AL+QF LMR  E  PDE+TVS+V+S+C  L+    G  A
Subjt:  FAIFFTMEKVDVISWNSLILGCHRSGFRVLALNQFSLMRTTEHSPDEFTVSIVMSVCCGLQAFDLGFSA

Q9SVH0 Pentatricopeptide repeat-containing protein At4g207701.9e-3033.62Show/hide
Query:  KTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKGACQLFDEMTERDTVSWNSMISGYVSSGFGDSAMAV
        K IH  +V++G+ ++T+L NR L LY   G      KVF ++  ++V SWN  L    + GD+  AC++FD M ERD VSWN+MIS  V  GF + A+ V
Subjt:  KTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKGACQLFDEMTERDTVSWNSMISGYVSSGFGDSAMAV

Query:  FLEMQNAGFRSSEYTFSILLSLVSCTR-----HGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVG-LVDYMFAIFFTMEKVDVISWNSLILGCHRSGFRV
        +  M   GF  S +T + +LS  +C++      G + HG  +++G+D  ++ +GN+L+ MY K G +VDY   +F ++ + + +S+ ++I G  R    +
Subjt:  FLEMQNAGFRSSEYTFSILLSLVSCTR-----HGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVG-LVDYMFAIFFTMEKVDVISWNSLILGCHRSGFRV

Query:  LALNQFSLMRTTEHSPDEFTVSIVMSVCCGLQAFD
         A+  F LM       D   +S ++S+    +  D
Subjt:  LALNQFSLMRTTEHSPDEFTVSIVMSVCCGLQAFD

Arabidopsis top hitse value%identityAlignment
AT1G09190.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.3e-3131.28Show/hide
Query:  YSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKGACQLFDEMTERDTVSWNS
        Y+ L+  C +L  +   K +H +L++ G +    +    ++LY   G + +  KVF ++ E+NV+ WN+ ++G    GD++    LF +M+ER  VSWNS
Subjt:  YSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKGACQLFDEMTERDTVSWNS

Query:  MISGYVSSGFGDSAMAVFLEMQNAGFRSSEYTFSILLSL---VSCTRHGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYMFAIFFTMEKVDVISW
        MIS     G    A+ +F EM + GF   E T   +L +   +     GK IH +   SG+    + +GN+L+D Y K G ++   AIF  M++ +V+SW
Subjt:  MISGYVSSGFGDSAMAVFLEMQNAGFRSSEYTFSILLSL---VSCTRHGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYMFAIFFTMEKVDVISW

Query:  NSLILGCHRSGFRVLALNQF-SLMRTTEHSPDEFTVSIVMSVC
        N+LI G   +G     ++ F +++   + +P+E T   V++ C
Subjt:  NSLILGCHRSGFRVLALNQF-SLMRTTEHSPDEFTVSIVMSVC

AT1G43980.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.2e-6951.39Show/hide
Query:  YSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKGACQLFDEMTERDTVSWNS
        +S+L+++ L  +S  +AK +HAQL++ G    T+ GNRCLQLY   G V   L++F DI +KN I+WN+CLKGLF+ G +  A  LFDEM ERD VSWN+
Subjt:  YSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKGACQLFDEMTERDTVSWNS

Query:  MISGYVSSGFGDSAMAVFLEMQNAGFRSSEYTFSILLSLVSCTRHGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYMFAIFFTMEKVDVISWNSL
        MISG VS GF +  + VF +MQ    R +E+TFSIL SLV+C RHG+QIHG+ I SGV   ++V+ NS++DMY ++G+ DY  ++F TME  DV+SWN L
Subjt:  MISGYVSSGFGDSAMAVFLEMQNAGFRSSEYTFSILLSLVSCTRHGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYMFAIFFTMEKVDVISWNSL

Query:  ILGCHRSGFRVLALNQFSLMRTTEHSPDEFTVSIVMSVCCGLQAFDLGFSA
        IL C  SG + +AL+QF LMR  E  PDE+TVS+V+S+C  L+    G  A
Subjt:  ILGCHRSGFRVLALNQFSLMRTTEHSPDEFTVSIVMSVCCGLQAFDLGFSA

AT4G20770.1 Pentatricopeptide repeat (PPR) superfamily protein1.3e-3133.62Show/hide
Query:  KTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKGACQLFDEMTERDTVSWNSMISGYVSSGFGDSAMAV
        K IH  +V++G+ ++T+L NR L LY   G      KVF ++  ++V SWN  L    + GD+  AC++FD M ERD VSWN+MIS  V  GF + A+ V
Subjt:  KTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKGACQLFDEMTERDTVSWNSMISGYVSSGFGDSAMAV

Query:  FLEMQNAGFRSSEYTFSILLSLVSCTR-----HGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVG-LVDYMFAIFFTMEKVDVISWNSLILGCHRSGFRV
        +  M   GF  S +T + +LS  +C++      G + HG  +++G+D  ++ +GN+L+ MY K G +VDY   +F ++ + + +S+ ++I G  R    +
Subjt:  FLEMQNAGFRSSEYTFSILLSLVSCTR-----HGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVG-LVDYMFAIFFTMEKVDVISWNSLILGCHRSGFRV

Query:  LALNQFSLMRTTEHSPDEFTVSIVMSVCCGLQAFD
         A+  F LM       D   +S ++S+    +  D
Subjt:  LALNQFSLMRTTEHSPDEFTVSIVMSVCCGLQAFD

AT4G37170.1 Pentatricopeptide repeat (PPR) superfamily protein4.0e-3633.46Show/hide
Query:  AHRASISLYSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKGACQLFDEMTE
        A +   S Y  LI  C   R++   K +H  +   G      + NR L++Y   G + +  KVF ++  +++ SWN+ + G    G ++ A +LFDEMTE
Subjt:  AHRASISLYSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKGACQLFDEMTE

Query:  RDTVSWNSMISGYVSSGFGDSAMAVFLEMQNA-GFRSSEYTFSILL---SLVSCTRHGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYMFAIFFT
        +D+ SW +M++GYV     + A+ ++  MQ     R + +T SI +   + V C R GK+IHG ++R+G+D S  VL +SL+DMYGK G +D    IF  
Subjt:  RDTVSWNSMISGYVSSGFGDSAMAVFLEMQNA-GFRSSEYTFSILL---SLVSCTRHGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYMFAIFFT

Query:  MEKVDVISWNSLILGCHRSGFRVLALNQFSLMRTTEHSPDEFTVSIVMSVCCGLQAFDLG
        + + DV+SW S+I    +S       + FS +  +   P+E+T + V++ C  L   +LG
Subjt:  MEKVDVISWNSLILGCHRSGFRVLALNQFSLMRTTEHSPDEFTVSIVMSVCCGLQAFDLG

AT5G08305.1 Pentatricopeptide repeat (PPR) superfamily protein3.9e-3131.17Show/hide
Query:  YSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKGACQLFDEMTERDTVSWNS
        Y  L+     L +  +  ++H  +VK GL  + F+ N  + +YG F       K+F ++  KN+++WN  L    + GD+  A  +FDEM+ERD V+W+S
Subjt:  YSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKGACQLFDEMTERDTVSWNS

Query:  MISGYVSSGFGDSAMAVFLEMQNAGFRSSEYTFSILLSLVSCTRH------GKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYMFAIFF--TMEKV
        MI GYV  G  + A+ +F +M   G  SS+     ++S++    H      GK +H  ++   + + +V+L  SLIDMY K G +   +++F+  ++++ 
Subjt:  MISGYVSSGFGDSAMAVFLEMQNAGFRSSEYTFSILLSLVSCTRH------GKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYMFAIFF--TMEKV

Query:  DVISWNSLILGCHRSGFRVLALNQFSLMRTTEHSPDEFTVSIVMSVC
        D + WN++I G    GF   +L  F  MR ++  PDE T   +++ C
Subjt:  DVISWNSLILGCHRSGFRVLALNQFSLMRTTEHSPDEFTVSIVMSVC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCCTCCTACTGAAGAAACTTGTTGGTGCGCATAGAGCTTCCATTTCTCTGTATTCTCAGTTGATAGACCAATGTTTAGCACTAAGATCTGTTCATATTGCGAAAAC
AATCCACGCTCAGTTGGTAAAGCTTGGCCTTAACAACAATACTTTTTTGGGCAATCGCTGTCTTCAGCTATACGGGTTATTTGGTCCCGTTCATGAGGTATTGAAAGTAT
TTCATGACATTAAAGAGAAGAATGTTATATCCTGGAACATATGCTTGAAGGGCTTGTTTCGATTTGGTGATATTAAAGGTGCATGCCAGTTGTTTGATGAAATGACTGAG
AGAGACACTGTTTCATGGAACTCCATGATTTCTGGCTACGTCTCATCTGGGTTTGGTGATAGTGCTATGGCTGTTTTTCTGGAGATGCAAAATGCTGGTTTTAGATCAAG
TGAGTATACCTTTTCCATTTTGCTGTCACTTGTGTCGTGTACTCGTCATGGTAAGCAAATTCATGGTAGTATGATTCGTAGTGGTGTGGATGTGTCTAGTGTGGTGCTTG
GGAATTCGTTAATTGATATGTATGGAAAAGTTGGCCTTGTTGATTATATGTTTGCCATATTTTTTACAATGGAAAAGGTGGATGTTATTTCTTGGAACTCTTTGATTTTG
GGCTGCCACAGATCAGGCTTTAGAGTATTGGCACTAAACCAGTTCTCTCTAATGAGAACCACTGAGCACTCTCCTGATGAGTTCACTGTATCAATAGTGATGAGTGTCTG
TTGTGGCCTCCAAGCGTTTGATTTGGGATTCAGTGCAGCTTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCCTCCTACTGAAGAAACTTGTTGGTGCGCATAGAGCTTCCATTTCTCTGTATTCTCAGTTGATAGACCAATGTTTAGCACTAAGATCTGTTCATATTGCGAAAAC
AATCCACGCTCAGTTGGTAAAGCTTGGCCTTAACAACAATACTTTTTTGGGCAATCGCTGTCTTCAGCTATACGGGTTATTTGGTCCCGTTCATGAGGTATTGAAAGTAT
TTCATGACATTAAAGAGAAGAATGTTATATCCTGGAACATATGCTTGAAGGGCTTGTTTCGATTTGGTGATATTAAAGGTGCATGCCAGTTGTTTGATGAAATGACTGAG
AGAGACACTGTTTCATGGAACTCCATGATTTCTGGCTACGTCTCATCTGGGTTTGGTGATAGTGCTATGGCTGTTTTTCTGGAGATGCAAAATGCTGGTTTTAGATCAAG
TGAGTATACCTTTTCCATTTTGCTGTCACTTGTGTCGTGTACTCGTCATGGTAAGCAAATTCATGGTAGTATGATTCGTAGTGGTGTGGATGTGTCTAGTGTGGTGCTTG
GGAATTCGTTAATTGATATGTATGGAAAAGTTGGCCTTGTTGATTATATGTTTGCCATATTTTTTACAATGGAAAAGGTGGATGTTATTTCTTGGAACTCTTTGATTTTG
GGCTGCCACAGATCAGGCTTTAGAGTATTGGCACTAAACCAGTTCTCTCTAATGAGAACCACTGAGCACTCTCCTGATGAGTTCACTGTATCAATAGTGATGAGTGTCTG
TTGTGGCCTCCAAGCGTTTGATTTGGGATTCAGTGCAGCTTTTTGA
Protein sequenceShow/hide protein sequence
MCLLLKKLVGAHRASISLYSQLIDQCLALRSVHIAKTIHAQLVKLGLNNNTFLGNRCLQLYGLFGPVHEVLKVFHDIKEKNVISWNICLKGLFRFGDIKGACQLFDEMTE
RDTVSWNSMISGYVSSGFGDSAMAVFLEMQNAGFRSSEYTFSILLSLVSCTRHGKQIHGSMIRSGVDVSSVVLGNSLIDMYGKVGLVDYMFAIFFTMEKVDVISWNSLIL
GCHRSGFRVLALNQFSLMRTTEHSPDEFTVSIVMSVCCGLQAFDLGFSAAF