; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g33070 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g33070
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr9:25068024..25070392
RNA-Seq ExpressionMoc09g33070
SyntenyMoc09g33070
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156048.1 uncharacterized protein LOC111023016 [Momordica charantia]1.0e-1786.21Show/hide
Query:  GEPVAGLIKATDLLGEARPSPGHRLNSTTLDRGEPAEEVESVPLTAEDRRVNIGTKLG
        GEPV GL KATDL GEARPSPGHRLNSTTLDRG  AEEVESVPLT E++RVNIGTKLG
Subjt:  GEPVAGLIKATDLLGEARPSPGHRLNSTTLDRGEPAEEVESVPLTAEDRRVNIGTKLG

XP_022156571.1 uncharacterized protein LOC111023448 [Momordica charantia]8.2e-6395.38Show/hide
Query:  MNPDESHRCFEEKSLKEAADHLDEARPSPDRQLNPTTLDGGEPVSGLNKATDLSRKARPSPGYQLNPTTLDKGEPVAGLIKATDLLGEARPSPGHRLNST
        MNPDESHRCFEEKSLK+AADHLDEARPSPDRQLNPTTLDGGEPVSGLNKATDLS KARPSPGY+LNPTTLDKG PVAGLIKATDL G+ARPSPGHRLNST
Subjt:  MNPDESHRCFEEKSLKEAADHLDEARPSPDRQLNPTTLDGGEPVSGLNKATDLSRKARPSPGYQLNPTTLDKGEPVAGLIKATDLLGEARPSPGHRLNST

Query:  TLDRGEPAEEVESVPLTAEDRRVNIGTKLG
        TLDRGEPAEEVESVPLTAEDRRVNIGTKLG
Subjt:  TLDRGEPAEEVESVPLTAEDRRVNIGTKLG

XP_022158042.1 uncharacterized protein LOC111024621 [Momordica charantia]2.0e-1645.74Show/hide
Query:  NPDESHRCFEEKSLKEAADHLDEARPSPDRQLNPTTLDGGEPVSGLNKATDLSRKARPSPGYQLNPTTLDKGEPVAGLIKATDLLGEARPSPGHRLNSTT
        NP E  +CFEE+SL+ AA+ L E  PSPD Q NPTT D GEPV G+                           P+    +A D LGE   SP    + T 
Subjt:  NPDESHRCFEEKSLKEAADHLDEARPSPDRQLNPTTLDGGEPVSGLNKATDLSRKARPSPGYQLNPTTLDKGEPVAGLIKATDLLGEARPSPGHRLNSTT

Query:  LDRGEPAEEVESVPLTAEDRRVNIGTKLG
         DRGEP +EVES+PLT++DRRVNIGT+LG
Subjt:  LDRGEPAEEVESVPLTAEDRRVNIGTKLG

TrEMBL top hitse value%identityAlignment
A0A6J1DPJ5 uncharacterized protein LOC1110230165.1e-1886.21Show/hide
Query:  GEPVAGLIKATDLLGEARPSPGHRLNSTTLDRGEPAEEVESVPLTAEDRRVNIGTKLG
        GEPV GL KATDL GEARPSPGHRLNSTTLDRG  AEEVESVPLT E++RVNIGTKLG
Subjt:  GEPVAGLIKATDLLGEARPSPGHRLNSTTLDRGEPAEEVESVPLTAEDRRVNIGTKLG

A0A6J1DVC6 Ribonuclease H4.0e-6395.38Show/hide
Query:  MNPDESHRCFEEKSLKEAADHLDEARPSPDRQLNPTTLDGGEPVSGLNKATDLSRKARPSPGYQLNPTTLDKGEPVAGLIKATDLLGEARPSPGHRLNST
        MNPDESHRCFEEKSLK+AADHLDEARPSPDRQLNPTTLDGGEPVSGLNKATDLS KARPSPGY+LNPTTLDKG PVAGLIKATDL G+ARPSPGHRLNST
Subjt:  MNPDESHRCFEEKSLKEAADHLDEARPSPDRQLNPTTLDGGEPVSGLNKATDLSRKARPSPGYQLNPTTLDKGEPVAGLIKATDLLGEARPSPGHRLNST

Query:  TLDRGEPAEEVESVPLTAEDRRVNIGTKLG
        TLDRGEPAEEVESVPLTAEDRRVNIGTKLG
Subjt:  TLDRGEPAEEVESVPLTAEDRRVNIGTKLG

A0A6J1DW49 uncharacterized protein LOC1110246219.5e-1745.74Show/hide
Query:  NPDESHRCFEEKSLKEAADHLDEARPSPDRQLNPTTLDGGEPVSGLNKATDLSRKARPSPGYQLNPTTLDKGEPVAGLIKATDLLGEARPSPGHRLNSTT
        NP E  +CFEE+SL+ AA+ L E  PSPD Q NPTT D GEPV G+                           P+    +A D LGE   SP    + T 
Subjt:  NPDESHRCFEEKSLKEAADHLDEARPSPDRQLNPTTLDGGEPVSGLNKATDLSRKARPSPGYQLNPTTLDKGEPVAGLIKATDLLGEARPSPGHRLNSTT

Query:  LDRGEPAEEVESVPLTAEDRRVNIGTKLG
         DRGEP +EVES+PLT++DRRVNIGT+LG
Subjt:  LDRGEPAEEVESVPLTAEDRRVNIGTKLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCCTGATGAGAGCCATCGGTGCTTCGAAGAGAAGAGCCTGAAAGAAGCGGCTGATCACTTAGATGAGGCAAGACCGAGCCCTGATCGTCAACTTAATCCGACCAC
CCTTGACGGGGGGGAACCAGTGTCGGGCCTGAATAAAGCAACAGACCTCTCGAGAAAGGCGAGGCCGAGCCCTGGTTATCAACTTAATCCGACCACCCTTGATAAGGGAG
AACCAGTGGCAGGCCTGATTAAAGCGACAGATCTTTTGGGAGAGGCAAGGCCGAGCCCCGGTCATCGACTTAATTCGACCACCCTTGACAGGGGAGAACCGGCTGAAGAG
GTAGAATCTGTCCCTCTGACAGCCGAAGATCGACGGGTCAACATCGGAACCAAGTTGGGGAGAAGCCATGGATATCGACAATCAAGGGCAACCAGAAGAAAACTGGAAGA
GCCCTTTGATCAAATATTTGAAAGATGGGATCCTGCCTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATCCTGATGAGAGCCATCGGTGCTTCGAAGAGAAGAGCCTGAAAGAAGCGGCTGATCACTTAGATGAGGCAAGACCGAGCCCTGATCGTCAACTTAATCCGACCAC
CCTTGACGGGGGGGAACCAGTGTCGGGCCTGAATAAAGCAACAGACCTCTCGAGAAAGGCGAGGCCGAGCCCTGGTTATCAACTTAATCCGACCACCCTTGATAAGGGAG
AACCAGTGGCAGGCCTGATTAAAGCGACAGATCTTTTGGGAGAGGCAAGGCCGAGCCCCGGTCATCGACTTAATTCGACCACCCTTGACAGGGGAGAACCGGCTGAAGAG
GTAGAATCTGTCCCTCTGACAGCCGAAGATCGACGGGTCAACATCGGAACCAAGTTGGGGAGAAGCCATGGATATCGACAATCAAGGGCAACCAGAAGAAAACTGGAAGA
GCCCTTTGATCAAATATTTGAAAGATGGGATCCTGCCTACTGA
Protein sequenceShow/hide protein sequence
MNPDESHRCFEEKSLKEAADHLDEARPSPDRQLNPTTLDGGEPVSGLNKATDLSRKARPSPGYQLNPTTLDKGEPVAGLIKATDLLGEARPSPGHRLNSTTLDRGEPAEE
VESVPLTAEDRRVNIGTKLGRSHGYRQSRATRRKLEEPFDQIFERWDPAY