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Moc09g34540 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g34540
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description50S ribosomal protein L10
Genome locationchr9:26410121..26410450
RNA-Seq ExpressionMoc09g34540
SyntenyMoc09g34540
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0022626 - cytosolic ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001790 - Ribosomal protein L10P
IPR043141 - Ribosomal protein L10-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143603.1 50S ribosomal protein L10, chloroplastic [Cucumis sativus]5.2e-5397.25Show/hide
Query:  MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKL
        MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPD+FKALETMPSRAEVYAKMLGLL  PASSLVGTIQAPARELLMVLKAYVQKL
Subjt:  MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKL

Query:  EEQGGGGGQ
        EEQGGGGGQ
Subjt:  EEQGGGGGQ

XP_008445837.1 PREDICTED: 50S ribosomal protein L10, chloroplastic [Cucumis melo]1.5e-5296.33Show/hide
Query:  MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKL
        MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGK+YGPD+FKALETMPSRAEVYAKMLGLL  PASSLVGTIQAPARELLMVLKAYVQKL
Subjt:  MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKL

Query:  EEQGGGGGQ
        EEQGGGGGQ
Subjt:  EEQGGGGGQ

XP_022138927.1 50S ribosomal protein L10, chloroplastic [Momordica charantia]7.3e-55100Show/hide
Query:  MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKL
        MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKL
Subjt:  MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKL

Query:  EEQGGGGGQ
        EEQGGGGGQ
Subjt:  EEQGGGGGQ

XP_022990377.1 50S ribosomal protein L10, chloroplastic [Cucurbita maxima]3.1e-5396.33Show/hide
Query:  MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKL
        MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLL GPASSLVGT+QAPAR++LMVLKAYVQKL
Subjt:  MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKL

Query:  EEQGGGGGQ
        EEQGGGGGQ
Subjt:  EEQGGGGGQ

XP_023523503.1 50S ribosomal protein L10, chloroplastic [Cucurbita pepo subsp. pepo]8.9e-5395.41Show/hide
Query:  MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKL
        MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFK LETMPSRAEVYAKMLGLL GPASSLVGT+QAPAR++LMVLKAYVQKL
Subjt:  MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKL

Query:  EEQGGGGGQ
        EEQGGGGGQ
Subjt:  EEQGGGGGQ

TrEMBL top hitse value%identityAlignment
A0A0A0KLL5 Uncharacterized protein2.5e-5397.25Show/hide
Query:  MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKL
        MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPD+FKALETMPSRAEVYAKMLGLL  PASSLVGTIQAPARELLMVLKAYVQKL
Subjt:  MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKL

Query:  EEQGGGGGQ
        EEQGGGGGQ
Subjt:  EEQGGGGGQ

A0A1S3BDM0 50S ribosomal protein L10, chloroplastic7.4e-5396.33Show/hide
Query:  MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKL
        MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGK+YGPD+FKALETMPSRAEVYAKMLGLL  PASSLVGTIQAPARELLMVLKAYVQKL
Subjt:  MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKL

Query:  EEQGGGGGQ
        EEQGGGGGQ
Subjt:  EEQGGGGGQ

A0A5A7SUB8 50S ribosomal protein L107.4e-5396.33Show/hide
Query:  MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKL
        MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGK+YGPD+FKALETMPSRAEVYAKMLGLL  PASSLVGTIQAPARELLMVLKAYVQKL
Subjt:  MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKL

Query:  EEQGGGGGQ
        EEQGGGGGQ
Subjt:  EEQGGGGGQ

A0A6J1CCK7 50S ribosomal protein L10, chloroplastic3.5e-55100Show/hide
Query:  MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKL
        MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKL
Subjt:  MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKL

Query:  EEQGGGGGQ
        EEQGGGGGQ
Subjt:  EEQGGGGGQ

A0A6J1JII9 50S ribosomal protein L10, chloroplastic1.5e-5396.33Show/hide
Query:  MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKL
        MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLL GPASSLVGT+QAPAR++LMVLKAYVQKL
Subjt:  MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKL

Query:  EEQGGGGGQ
        EEQGGGGGQ
Subjt:  EEQGGGGGQ

SwissProt top hitse value%identityAlignment
B9KBJ7 50S ribosomal protein L102.4e-0829.41Show/hide
Query:  MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKL
        +KG    L+V   +   A+K   +F KEK  + +   G   EG+ +  ++ + +  +PS+ E+YA ++G +  P S LV  +    R L++VL A  +K 
Subjt:  MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKL

Query:  EE
         E
Subjt:  EE

O80362 50S ribosomal protein L10, chloroplastic1.7e-4680.95Show/hide
Query:  MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKL
        MKGMN WLFVHSEEIPAA+KPYR FQKEKKLE+NDFTGAVFEGK+YGP++FKALET+P+RAE+YA++LG L GPAS++VGTIQAPAR L+MVLKAYV+KL
Subjt:  MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKL

Query:  EEQGG
        EE+GG
Subjt:  EEQGG

P82139 50S ribosomal protein L10, chloroplastic8.1e-4172.82Show/hide
Query:  MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKL
        MKGMN WLFVHSEEIP AIKPYR FQKE+KLEDNDFTGA FEGK+YGP + K LETMPS+AE++AK+LG L  P S+LVGT+QAPAR+L+ +LKAY++KL
Subjt:  MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKL

Query:  EEQ
        E++
Subjt:  EEQ

Q119S8 50S ribosomal protein L105.3e-0835.96Show/hide
Query:  MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAPAREL
        + G N +LF+   +I  AIK Y+DFQK  K    +F G V EG+    D  KA+  +PS+ E+ A++ G +N  A+ L  ++ A   +L
Subjt:  MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAPAREL

Q9FY50 50S ribosomal protein L10, chloroplastic4.0e-4072.82Show/hide
Query:  MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKL
        MKGMN WLFV ++EIP+AIKPYR FQKE+KLE+NDF GAVFEGK+Y PD+FK LETMP+RAEVYAKMLG L  PA +LV T+QAPARE++MVL AY++KL
Subjt:  MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKL

Query:  EEQ
        E++
Subjt:  EEQ

Arabidopsis top hitse value%identityAlignment
AT3G12370.1 Ribosomal protein L10 family protein6.9e-2764.71Show/hide
Query:  MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAP
        MKGMN WLFV SE+IPAA+K + +FQKEKKL DN+  GAVFE K Y P D+K +ETMPSRA+VY  MLG L+ PA  LV  +QAP
Subjt:  MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAP

AT5G13510.1 Ribosomal protein L10 family protein2.9e-4172.82Show/hide
Query:  MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKL
        MKGMN WLFV ++EIP+AIKPYR FQKE+KLE+NDF GAVFEGK+Y PD+FK LETMP+RAEVYAKMLG L  PA +LV T+QAPARE++MVL AY++KL
Subjt:  MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKL

Query:  EEQ
        E++
Subjt:  EEQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGGCATGAACGTCTGGCTATTTGTCCACTCCGAGGAGATTCCGGCCGCCATCAAGCCCTACAGGGATTTCCAGAAGGAGAAGAAGCTCGAGGATAATGAT
TTCACCGGCGCGGTTTTCGAGGGGAAGTATTACGGGCCGGATGATTTCAAGGCACTGGAGACAATGCCGTCCAGGGCGGAGGTGTATGCCAAAATGTTGGGCCTG
TTGAACGGTCCGGCGTCGAGCTTGGTCGGAACGATACAGGCTCCGGCGAGGGAATTGTTGATGGTTTTGAAGGCTTACGTGCAGAAATTGGAGGAGCAGGGCGGC
GGCGGCGGGCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGGCATGAACGTCTGGCTATTTGTCCACTCCGAGGAGATTCCGGCCGCCATCAAGCCCTACAGGGATTTCCAGAAGGAGAAGAAGCTCGAGGATAATGAT
TTCACCGGCGCGGTTTTCGAGGGGAAGTATTACGGGCCGGATGATTTCAAGGCACTGGAGACAATGCCGTCCAGGGCGGAGGTGTATGCCAAAATGTTGGGCCTG
TTGAACGGTCCGGCGTCGAGCTTGGTCGGAACGATACAGGCTCCGGCGAGGGAATTGTTGATGGTTTTGAAGGCTTACGTGCAGAAATTGGAGGAGCAGGGCGGC
GGCGGCGGGCAGTAA
Protein sequenceShow/hide protein sequence
MKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLNGPASSLVGTIQAPARELLMVLKAYVQKLEEQGG
GGGQ