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Moc09g34930 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g34930
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptioncalumenin isoform X1
Genome locationchr9:26748966..26750426
RNA-Seq ExpressionMoc09g34930
SyntenyMoc09g34930
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAD5317129.1 hypothetical protein E3N88_17075 [Mikania micrantha]9.2e-0872.09Show/hide
Query:  DTDRDGRLTLTEMIDNPFVFYNAVFSEDEDEDEVEYLYHSEFR
        DTD+DGRL+LTEMID+P+VFY+A+F+EDEDED   Y YH EFR
Subjt:  DTDRDGRLTLTEMIDNPFVFYNAVFSEDEDEDEVEYLYHSEFR
KVH95798.1 Calcium-binding EF-hand [Cynara cardunculus var. scolymus]9.2e-0872.09Show/hide
Query:  DTDRDGRLTLTEMIDNPFVFYNAVFSEDEDEDEVEYLYHSEFR
        DTD+DGRL+LTEMID+P+VFY+A+F+EDEDED   Y YH EFR
Subjt:  DTDRDGRLTLTEMIDNPFVFYNAVFSEDEDEDEVEYLYHSEFR
PQP98366.1 calumenin [Prunus yedoensis var. nudiflora]9.2e-0860Show/hide
Query:  RIPNLVRDTDRDGRLTLTEMIDNPFVFYNAVFSEDEDEDEVEYLYHSEFR
        R+ ++  DTD+DGRLTLTEMI+NP+VFY+A+F++DE+ED   Y +H EFR
Subjt:  RIPNLVRDTDRDGRLTLTEMIDNPFVFYNAVFSEDEDEDEVEYLYHSEFR
XP_022138923.1 calumenin-B-like isoform X1 [Momordica charantia]6.0e-15100Show/hide
Query:  DTDRDGRLTLTEMIDNPFVFYNAVFSEDEDEDEVEYLYHSEFR
        DTDRDGRLTLTEMIDNPFVFYNAVFSEDEDEDEVEYLYHSEFR
Subjt:  DTDRDGRLTLTEMIDNPFVFYNAVFSEDEDEDEVEYLYHSEFR
XP_023736477.1 reticulocalbin-2 [Lactuca sativa]9.2e-0872.09Show/hide
Query:  DTDRDGRLTLTEMIDNPFVFYNAVFSEDEDEDEVEYLYHSEFR
        DTD+DGRL+LTEMID+P+VFY+A+F+EDEDED   Y YH EFR
Subjt:  DTDRDGRLTLTEMIDNPFVFYNAVFSEDEDEDEVEYLYHSEFR
TrEMBL top hitse value%identityAlignment
A0A314XZI3 Calumenin4.5e-0860Show/hide
Query:  RIPNLVRDTDRDGRLTLTEMIDNPFVFYNAVFSEDEDEDEVEYLYHSEFR
        R+ ++  DTD+DGRLTLTEMI+NP+VFY+A+F++DE+ED   Y +H EFR
Subjt:  RIPNLVRDTDRDGRLTLTEMIDNPFVFYNAVFSEDEDEDEVEYLYHSEFR
A0A4D9AZ81 Uncharacterized protein1.8e-0957.14Show/hide
Query:  QKGEHSDDQVSIGRIPNLVRDTDRDGRLTLTEMIDNPFVFYNAVFSEDEDEDEVEYLYHSEFR
        Q+ E+   QV    + N   DTD DGRL+L EM++NP+VFY+AVF EDEDEDE +Y YH EFR
Subjt:  QKGEHSDDQVSIGRIPNLVRDTDRDGRLTLTEMIDNPFVFYNAVFSEDEDEDEVEYLYHSEFR
A0A5N6NS11 Uncharacterized protein4.5e-0872.09Show/hide
Query:  DTDRDGRLTLTEMIDNPFVFYNAVFSEDEDEDEVEYLYHSEFR
        DTD+DGRL+LTEMID+P+VFY+A+F+EDEDED   Y YH EFR
Subjt:  DTDRDGRLTLTEMIDNPFVFYNAVFSEDEDEDEVEYLYHSEFR
A0A6J1CEG3 calumenin-B-like isoform X12.9e-15100Show/hide
Query:  DTDRDGRLTLTEMIDNPFVFYNAVFSEDEDEDEVEYLYHSEFR
        DTDRDGRLTLTEMIDNPFVFYNAVFSEDEDEDEVEYLYHSEFR
Subjt:  DTDRDGRLTLTEMIDNPFVFYNAVFSEDEDEDEVEYLYHSEFR
A0A6S7MH39 Uncharacterized protein4.5e-0872.09Show/hide
Query:  DTDRDGRLTLTEMIDNPFVFYNAVFSEDEDEDEVEYLYHSEFR
        DTD+DGRL+LTEMID+P+VFY+A+F+EDEDED   Y YH EFR
Subjt:  DTDRDGRLTLTEMIDNPFVFYNAVFSEDEDEDEVEYLYHSEFR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G08580.1 Calcium-binding EF hand family protein7.5e-0855.81Show/hide
Query:  DTDRDGRLTLTEMIDNPFVFYNAVFSEDEDEDEVEYLYHSEFR
        D+D+D RLTL EMI++P+VFY+A+F ED+ +D  +Y +H EFR
Subjt:  DTDRDGRLTLTEMIDNPFVFYNAVFSEDEDEDEVEYLYHSEFR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACAACAGTGTATTTCAGATTGCAGCTCGAACTCGGCCTCCGGACCGATCTGAATACTTGGGCGGACCTGCACAAAAAGGTGAGCACTCCGACGATCAAGTC
AGTATAGGTCGGATTCCCAATTTAGTTCGAGATACCGATAGAGATGGACGTCTAACCTTGACCGAGATGATTGACAACCCATTTGTATTCTACAATGCGGTTTTT
AGCGAAGACGAAGACGAAGATGAAGTGGAGTATTTGTACCACAGTGAATTTCGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCACAACAGTGTATTTCAGATTGCAGCTCGAACTCGGCCTCCGGACCGATCTGAATACTTGGGCGGACCTGCACAAAAAGGTGAGCACTCCGACGATCAAGTC
AGTATAGGTCGGATTCCCAATTTAGTTCGAGATACCGATAGAGATGGACGTCTAACCTTGACCGAGATGATTGACAACCCATTTGTATTCTACAATGCGGTTTTT
AGCGAAGACGAAGACGAAGATGAAGTGGAGTATTTGTACCACAGTGAATTTCGTTAG
Protein sequenceShow/hide protein sequence
MHNSVFQIAARTRPPDRSEYLGGPAQKGEHSDDQVSIGRIPNLVRDTDRDGRLTLTEMIDNPFVFYNAVFSEDEDEDEVEYLYHSEFR