; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g35220 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g35220
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionmediator of RNA polymerase II transcription subunit 15a-like
Genome locationchr9:26957549..26960793
RNA-Seq ExpressionMoc09g35220
SyntenyMoc09g35220
Gene Ontology termsGO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0003713 - transcription coactivator activity (molecular function)
GO:0031490 - chromatin DNA binding (molecular function)
InterPro domainsIPR044661 - Mediator of RNA polymerase II transcription subunit 15a/b/c-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601093.1 Mediator of RNA polymerase II transcription subunit 15a, partial [Cucurbita argyrosperma subsp. sororia]1.1e-14760.81Show/hide
Query:  SSPLYNSDEDQATFHHYRLQSVWIWKQFLWLSPKGIRSIVFGCVFASFSTLADLVLVATVNVSVIGVYLVLCLWFLVAVELDDGFSFCSCERIFGIYLGD
        S PLYN+ ED+AT HH+R QSVW+W+ F  + PKG                                                       ERIF +YLGD
Subjt:  SSPLYNSDEDQATFHHYRLQSVWIWKQFLWLSPKGIRSIVFGCVFASFSTLADLVLVATVNVSVIGVYLVLCLWFLVAVELDDGFSFCSCERIFGIYLGD

Query:  YWKLAYGKRRTMVPGLPENGRADCEEDAWDDFLFSQRGKVSHQIVNDAVQEEKPFIISTPGMSPSALLEEVSESDRDNDICSVTPLQRLLKMVNVMSPKA
        +WKLAY K R M+PGL ENG  D E+ A ++FL+         IVNDA Q EK FI+STPGMSPS+LLEEV++SDRDND C VTPLQRL+KMVNVMSPKA
Subjt:  YWKLAYGKRRTMVPGLPENGRADCEEDAWDDFLFSQRGKVSHQIVNDAVQEEKPFIISTPGMSPSALLEEVSESDRDNDICSVTPLQRLLKMVNVMSPKA

Query:  LSASISDIDSIVCMTDRVASSAPLNKSKAEISEDLVGTVTSRLRKRCSIFGGSTGSRRTRHCRNTRMYTSSRRMMYCESYDLNSTFTERSR-IETPEHSH
        LSAS+SDIDSIVCMTDRV+SSAPLNKSK  +  DL GTV SRLR++CS FGG+ GSRRTRH          R +M CE +DL+S FT+RSR IETP+HS+
Subjt:  LSASISDIDSIVCMTDRVASSAPLNKSKAEISEDLVGTVTSRLRKRCSIFGGSTGSRRTRHCRNTRMYTSSRRMMYCESYDLNSTFTERSR-IETPEHSH

Query:  WRGFSLPFKQYLLEEIRKINEQLIDTVVSVCDKDMITTDNAATNDRSEGIIVECSFAAMRISSNKISQQASALQLTVHPLKLLVPKGYPHCSPIFNKLKL
        W GFSLP KQ LLEEIR+INEQLI T VS+CDKDM+TTD  AT  RSEGI+VECSF A+   S+ IS+Q SA+QL +HPLKLLVP GYPH SPIF   K+
Subjt:  WRGFSLPFKQYLLEEIRKINEQLIDTVVSVCDKDMITTDNAATNDRSEGIIVECSFAAMRISSNKISQQASALQLTVHPLKLLVPKGYPHCSPIFNKLKL

Query:  EACPTDCEELSLKTREKFNMCVRSLPHPFSISEVARTWDACAREVVSEFAQRNGGGSFTSKYGSWEDCLHHA
        EACPT CE+LSL+ REKFNM VRSL HPFSISEVARTWD CAR+V+SE+A++NGGGSF+SKYGSWEDCLH A
Subjt:  EACPTDCEELSLKTREKFNMCVRSLPHPFSISEVARTWDACAREVVSEFAQRNGGGSFTSKYGSWEDCLHHA

XP_022138947.1 mediator of RNA polymerase II transcription subunit 15a-like isoform X1 [Momordica charantia]2.2e-204100Show/hide
Query:  MVPGLPENGRADCEEDAWDDFLFSQRGKVSHQIVNDAVQEEKPFIISTPGMSPSALLEEVSESDRDNDICSVTPLQRLLKMVNVMSPKALSASISDIDSI
        MVPGLPENGRADCEEDAWDDFLFSQRGKVSHQIVNDAVQEEKPFIISTPGMSPSALLEEVSESDRDNDICSVTPLQRLLKMVNVMSPKALSASISDIDSI
Subjt:  MVPGLPENGRADCEEDAWDDFLFSQRGKVSHQIVNDAVQEEKPFIISTPGMSPSALLEEVSESDRDNDICSVTPLQRLLKMVNVMSPKALSASISDIDSI

Query:  VCMTDRVASSAPLNKSKAEISEDLVGTVTSRLRKRCSIFGGSTGSRRTRHCRNTRMYTSSRRMMYCESYDLNSTFTERSRIETPEHSHWRGFSLPFKQYL
        VCMTDRVASSAPLNKSKAEISEDLVGTVTSRLRKRCSIFGGSTGSRRTRHCRNTRMYTSSRRMMYCESYDLNSTFTERSRIETPEHSHWRGFSLPFKQYL
Subjt:  VCMTDRVASSAPLNKSKAEISEDLVGTVTSRLRKRCSIFGGSTGSRRTRHCRNTRMYTSSRRMMYCESYDLNSTFTERSRIETPEHSHWRGFSLPFKQYL

Query:  LEEIRKINEQLIDTVVSVCDKDMITTDNAATNDRSEGIIVECSFAAMRISSNKISQQASALQLTVHPLKLLVPKGYPHCSPIFNKLKLEACPTDCEELSL
        LEEIRKINEQLIDTVVSVCDKDMITTDNAATNDRSEGIIVECSFAAMRISSNKISQQASALQLTVHPLKLLVPKGYPHCSPIFNKLKLEACPTDCEELSL
Subjt:  LEEIRKINEQLIDTVVSVCDKDMITTDNAATNDRSEGIIVECSFAAMRISSNKISQQASALQLTVHPLKLLVPKGYPHCSPIFNKLKLEACPTDCEELSL

Query:  KTREKFNMCVRSLPHPFSISEVARTWDACAREVVSEFAQRNGGGSFTSKYGSWEDCLHHA
        KTREKFNMCVRSLPHPFSISEVARTWDACAREVVSEFAQRNGGGSFTSKYGSWEDCLHHA
Subjt:  KTREKFNMCVRSLPHPFSISEVARTWDACAREVVSEFAQRNGGGSFTSKYGSWEDCLHHA

XP_022138948.1 mediator of RNA polymerase II transcription subunit 15a-like isoform X2 [Momordica charantia]6.2e-159100Show/hide
Query:  MVPGLPENGRADCEEDAWDDFLFSQRGKVSHQIVNDAVQEEKPFIISTPGMSPSALLEEVSESDRDNDICSVTPLQRLLKMVNVMSPKALSASISDIDSI
        MVPGLPENGRADCEEDAWDDFLFSQRGKVSHQIVNDAVQEEKPFIISTPGMSPSALLEEVSESDRDNDICSVTPLQRLLKMVNVMSPKALSASISDIDSI
Subjt:  MVPGLPENGRADCEEDAWDDFLFSQRGKVSHQIVNDAVQEEKPFIISTPGMSPSALLEEVSESDRDNDICSVTPLQRLLKMVNVMSPKALSASISDIDSI

Query:  VCMTDRVASSAPLNKSKAEISEDLVGTVTSRLRKRCSIFGGSTGSRRTRHCRNTRMYTSSRRMMYCESYDLNSTFTERSRIETPEHSHWRGFSLPFKQYL
        VCMTDRVASSAPLNKSKAEISEDLVGTVTSRLRKRCSIFGGSTGSRRTRHCRNTRMYTSSRRMMYCESYDLNSTFTERSRIETPEHSHWRGFSLPFKQYL
Subjt:  VCMTDRVASSAPLNKSKAEISEDLVGTVTSRLRKRCSIFGGSTGSRRTRHCRNTRMYTSSRRMMYCESYDLNSTFTERSRIETPEHSHWRGFSLPFKQYL

Query:  LEEIRKINEQLIDTVVSVCDKDMITTDNAATNDRSEGIIVECSFAAMRISSNKISQQASALQLTVHPLKLLVPKGYPHCSPIFNKLKLEA
        LEEIRKINEQLIDTVVSVCDKDMITTDNAATNDRSEGIIVECSFAAMRISSNKISQQASALQLTVHPLKLLVPKGYPHCSPIFNKLKLEA
Subjt:  LEEIRKINEQLIDTVVSVCDKDMITTDNAATNDRSEGIIVECSFAAMRISSNKISQQASALQLTVHPLKLLVPKGYPHCSPIFNKLKLEA

XP_022956517.1 mediator of RNA polymerase II transcription subunit 15a-like [Cucurbita moschata]2.1e-14660.59Show/hide
Query:  SSPLYNSDEDQATFHHYRLQSVWIWKQFLWLSPKGIRSIVFGCVFASFSTLADLVLVATVNVSVIGVYLVLCLWFLVAVELDDGFSFCSCERIFGIYLGD
        S  +YN+ ED+AT HH+R QSVW+W+ F  + PKG                                                       ERIF IYLGD
Subjt:  SSPLYNSDEDQATFHHYRLQSVWIWKQFLWLSPKGIRSIVFGCVFASFSTLADLVLVATVNVSVIGVYLVLCLWFLVAVELDDGFSFCSCERIFGIYLGD

Query:  YWKLAYGKRRTMVPGLPENGRADCEEDAWDDFLFSQRGKVSHQIVNDAVQEEKPFIISTPGMSPSALLEEVSESDRDNDICSVTPLQRLLKMVNVMSPKA
        +WKLAY K R M+PGL ENG  D E+ A ++FL+         IVNDA Q EK FI+STPGMSPS+LLEEV++SDRDND C VTPLQRL+KMVNVMSPKA
Subjt:  YWKLAYGKRRTMVPGLPENGRADCEEDAWDDFLFSQRGKVSHQIVNDAVQEEKPFIISTPGMSPSALLEEVSESDRDNDICSVTPLQRLLKMVNVMSPKA

Query:  LSASISDIDSIVCMTDRVASSAPLNKSKAEISEDLVGTVTSRLRKRCSIFGGSTGSRRTRHCRNTRMYTSSRRMMYCESYDLNSTFTERSR-IETPEHSH
        LSAS+SDIDSIVCMTDRV+SSAPLNKSK  +  DL GTV SRLR++CS FGG+ GSRRTRH          R +M CE +DL+S FT+RSR IETP+HS+
Subjt:  LSASISDIDSIVCMTDRVASSAPLNKSKAEISEDLVGTVTSRLRKRCSIFGGSTGSRRTRHCRNTRMYTSSRRMMYCESYDLNSTFTERSR-IETPEHSH

Query:  WRGFSLPFKQYLLEEIRKINEQLIDTVVSVCDKDMITTDNAATNDRSEGIIVECSFAAMRISSNKISQQASALQLTVHPLKLLVPKGYPHCSPIFNKLKL
        W GFSLP KQ LLEEIR+INEQLI T VS+CDKDM+TTD  AT  RSEGI+VECSF A+   S+ IS Q SA+QL +HPLKLLVP GYPH SPIF   K+
Subjt:  WRGFSLPFKQYLLEEIRKINEQLIDTVVSVCDKDMITTDNAATNDRSEGIIVECSFAAMRISSNKISQQASALQLTVHPLKLLVPKGYPHCSPIFNKLKL

Query:  EACPTDCEELSLKTREKFNMCVRSLPHPFSISEVARTWDACAREVVSEFAQRNGGGSFTSKYGSWEDCLHHA
        EACPT CE+LSL+ REKFNM VRSL HPFSISEVARTWD CAR+V+SE+A++NGGGSF+SKYGSWEDCLH A
Subjt:  EACPTDCEELSLKTREKFNMCVRSLPHPFSISEVARTWDACAREVVSEFAQRNGGGSFTSKYGSWEDCLHHA

XP_023526658.1 mediator of RNA polymerase II transcription subunit 15a-like [Cucurbita pepo subsp. pepo]3.2e-14761.02Show/hide
Query:  SSPLYNSDEDQATFHHYRLQSVWIWKQFLWLSPKGIRSIVFGCVFASFSTLADLVLVATVNVSVIGVYLVLCLWFLVAVELDDGFSFCSCERIFGIYLGD
        S  LYN+ ED+AT HH+R QSVW+W+ F  + PKG                                                       ERIF IYLGD
Subjt:  SSPLYNSDEDQATFHHYRLQSVWIWKQFLWLSPKGIRSIVFGCVFASFSTLADLVLVATVNVSVIGVYLVLCLWFLVAVELDDGFSFCSCERIFGIYLGD

Query:  YWKLAYGKRRTMVPGLPENGRADCEEDAWDDFLFSQRGKVSHQIVNDAVQEEKPFIISTPGMSPSALLEEVSESDRDNDICSVTPLQRLLKMVNVMSPKA
        +WKLAY K R M+PGL ENG  D E+ A ++FL+         IVNDA Q EK FI+STPGMSPS+LLEEV++SDRDND C VTPLQRL+KMVNVMSPKA
Subjt:  YWKLAYGKRRTMVPGLPENGRADCEEDAWDDFLFSQRGKVSHQIVNDAVQEEKPFIISTPGMSPSALLEEVSESDRDNDICSVTPLQRLLKMVNVMSPKA

Query:  LSASISDIDSIVCMTDRVASSAPLNKSKAEISEDLVGTVTSRLRKRCSIFGGSTGSRRTRHCRNTRMYTSSRRMMYCESYDLNSTFTERSRI-ETPEHSH
        LSAS+SDIDSIVCMTDRV SSAPLNKSK  +  DL GTV SRLR++CS FGG+ GSRRTRH          R +M CE +DL+S FT+RSRI ETP+HS+
Subjt:  LSASISDIDSIVCMTDRVASSAPLNKSKAEISEDLVGTVTSRLRKRCSIFGGSTGSRRTRHCRNTRMYTSSRRMMYCESYDLNSTFTERSRI-ETPEHSH

Query:  WRGFSLPFKQYLLEEIRKINEQLIDTVVSVCDKDMITTDNAATNDRSEGIIVECSFAAMRISSNKISQQASALQLTVHPLKLLVPKGYPHCSPIFNKLKL
        W GFSLP KQ LLEEIR+INEQLI T VS+CDKDM+TTD+AAT  RSEGI+VECSF A+   S+ IS Q SA+QL +HPLKLLVP GYPH SPIF   K+
Subjt:  WRGFSLPFKQYLLEEIRKINEQLIDTVVSVCDKDMITTDNAATNDRSEGIIVECSFAAMRISSNKISQQASALQLTVHPLKLLVPKGYPHCSPIFNKLKL

Query:  EACPTDCEELSLKTREKFNMCVRSLPHPFSISEVARTWDACAREVVSEFAQRNGGGSFTSKYGSWEDCLHHA
        EACPT CE+LSL+ REKFNM VRSL HPFSISEVARTWD CAR+V+SE+A++NGGGSF+SKYGSWEDCLH A
Subjt:  EACPTDCEELSLKTREKFNMCVRSLPHPFSISEVARTWDACAREVVSEFAQRNGGGSFTSKYGSWEDCLHHA

TrEMBL top hitse value%identityAlignment
A0A5B6ZF98 KIX_2 domain-containing protein (Fragment)3.4e-6244.51Show/hide
Query:  SQRGKVSHQIVNDAVQEEKPFIISTPGMSPSALLEEVSESDRDNDICSVT----------PLQRLLKMVNVMSPKALSASISDIDSIVCMTDRVASSAPL
        S  G + HQ    A+ + +   I TPG+SPS LL E +  D ++   S            PL+RL+K+V  MSPKALSAS+SDI S+V M DR+A SAP 
Subjt:  SQRGKVSHQIVNDAVQEEKPFIISTPGMSPSALLEEVSESDRDNDICSVT----------PLQRLLKMVNVMSPKALSASISDIDSIVCMTDRVASSAPL

Query:  NKSKAEISEDLVGTVTSRLRKRCSIF-GGSTGSRRTRHCRNTRMYTSSRRMMYCESY-DLNSTF-----TERSRIETPEHSHWRGFSLPFKQYLLEEIRK
        N S+A + EDL      RL+ R  I   G+TG+R+ R       YTS+  +    S   +N +F     +E S +E+   S  +   +     LLEEIR+
Subjt:  NKSKAEISEDLVGTVTSRLRKRCSIF-GGSTGSRRTRHCRNTRMYTSSRRMMYCESY-DLNSTF-----TERSRIETPEHSHWRGFSLPFKQYLLEEIRK

Query:  INEQLIDTVVSVCDKDMITTDNAATNDRSEGIIVECSFAAMRISSNKISQQASALQLTVHPLKLLVPKGYPHCSPI-FNKLKLEACPTDCEELSLKTREK
        IN+QLIDTVV + D+D+  T  AA ++  EG IV+CSF+A+ +S N  SQ ASA Q++  PL+LLVP  YP+CSPI  +K  +E    + E+LS+K + +
Subjt:  INEQLIDTVVSVCDKDMITTDNAATNDRSEGIIVECSFAAMRISSNKISQQASALQLTVHPLKLLVPKGYPHCSPI-FNKLKLEACPTDCEELSLKTREK

Query:  FNMCVRSLPHPFSISEVARTWDACAREVVSEFAQRNGGGSFTSKYGSWEDCLHHA
        F++ +RSL  P S+ E+ARTWD CAR V+SE+AQ++GGGSF+SKYGSWE CL  A
Subjt:  FNMCVRSLPHPFSISEVARTWDACAREVVSEFAQRNGGGSFTSKYGSWEDCLHHA

A0A6J1CCM7 mediator of RNA polymerase II transcription subunit 15a-like isoform X11.0e-204100Show/hide
Query:  MVPGLPENGRADCEEDAWDDFLFSQRGKVSHQIVNDAVQEEKPFIISTPGMSPSALLEEVSESDRDNDICSVTPLQRLLKMVNVMSPKALSASISDIDSI
        MVPGLPENGRADCEEDAWDDFLFSQRGKVSHQIVNDAVQEEKPFIISTPGMSPSALLEEVSESDRDNDICSVTPLQRLLKMVNVMSPKALSASISDIDSI
Subjt:  MVPGLPENGRADCEEDAWDDFLFSQRGKVSHQIVNDAVQEEKPFIISTPGMSPSALLEEVSESDRDNDICSVTPLQRLLKMVNVMSPKALSASISDIDSI

Query:  VCMTDRVASSAPLNKSKAEISEDLVGTVTSRLRKRCSIFGGSTGSRRTRHCRNTRMYTSSRRMMYCESYDLNSTFTERSRIETPEHSHWRGFSLPFKQYL
        VCMTDRVASSAPLNKSKAEISEDLVGTVTSRLRKRCSIFGGSTGSRRTRHCRNTRMYTSSRRMMYCESYDLNSTFTERSRIETPEHSHWRGFSLPFKQYL
Subjt:  VCMTDRVASSAPLNKSKAEISEDLVGTVTSRLRKRCSIFGGSTGSRRTRHCRNTRMYTSSRRMMYCESYDLNSTFTERSRIETPEHSHWRGFSLPFKQYL

Query:  LEEIRKINEQLIDTVVSVCDKDMITTDNAATNDRSEGIIVECSFAAMRISSNKISQQASALQLTVHPLKLLVPKGYPHCSPIFNKLKLEACPTDCEELSL
        LEEIRKINEQLIDTVVSVCDKDMITTDNAATNDRSEGIIVECSFAAMRISSNKISQQASALQLTVHPLKLLVPKGYPHCSPIFNKLKLEACPTDCEELSL
Subjt:  LEEIRKINEQLIDTVVSVCDKDMITTDNAATNDRSEGIIVECSFAAMRISSNKISQQASALQLTVHPLKLLVPKGYPHCSPIFNKLKLEACPTDCEELSL

Query:  KTREKFNMCVRSLPHPFSISEVARTWDACAREVVSEFAQRNGGGSFTSKYGSWEDCLHHA
        KTREKFNMCVRSLPHPFSISEVARTWDACAREVVSEFAQRNGGGSFTSKYGSWEDCLHHA
Subjt:  KTREKFNMCVRSLPHPFSISEVARTWDACAREVVSEFAQRNGGGSFTSKYGSWEDCLHHA

A0A6J1CEI3 mediator of RNA polymerase II transcription subunit 15a-like isoform X23.0e-159100Show/hide
Query:  MVPGLPENGRADCEEDAWDDFLFSQRGKVSHQIVNDAVQEEKPFIISTPGMSPSALLEEVSESDRDNDICSVTPLQRLLKMVNVMSPKALSASISDIDSI
        MVPGLPENGRADCEEDAWDDFLFSQRGKVSHQIVNDAVQEEKPFIISTPGMSPSALLEEVSESDRDNDICSVTPLQRLLKMVNVMSPKALSASISDIDSI
Subjt:  MVPGLPENGRADCEEDAWDDFLFSQRGKVSHQIVNDAVQEEKPFIISTPGMSPSALLEEVSESDRDNDICSVTPLQRLLKMVNVMSPKALSASISDIDSI

Query:  VCMTDRVASSAPLNKSKAEISEDLVGTVTSRLRKRCSIFGGSTGSRRTRHCRNTRMYTSSRRMMYCESYDLNSTFTERSRIETPEHSHWRGFSLPFKQYL
        VCMTDRVASSAPLNKSKAEISEDLVGTVTSRLRKRCSIFGGSTGSRRTRHCRNTRMYTSSRRMMYCESYDLNSTFTERSRIETPEHSHWRGFSLPFKQYL
Subjt:  VCMTDRVASSAPLNKSKAEISEDLVGTVTSRLRKRCSIFGGSTGSRRTRHCRNTRMYTSSRRMMYCESYDLNSTFTERSRIETPEHSHWRGFSLPFKQYL

Query:  LEEIRKINEQLIDTVVSVCDKDMITTDNAATNDRSEGIIVECSFAAMRISSNKISQQASALQLTVHPLKLLVPKGYPHCSPIFNKLKLEA
        LEEIRKINEQLIDTVVSVCDKDMITTDNAATNDRSEGIIVECSFAAMRISSNKISQQASALQLTVHPLKLLVPKGYPHCSPIFNKLKLEA
Subjt:  LEEIRKINEQLIDTVVSVCDKDMITTDNAATNDRSEGIIVECSFAAMRISSNKISQQASALQLTVHPLKLLVPKGYPHCSPIFNKLKLEA

A0A6J1GWK1 mediator of RNA polymerase II transcription subunit 15a-like1.0e-14660.59Show/hide
Query:  SSPLYNSDEDQATFHHYRLQSVWIWKQFLWLSPKGIRSIVFGCVFASFSTLADLVLVATVNVSVIGVYLVLCLWFLVAVELDDGFSFCSCERIFGIYLGD
        S  +YN+ ED+AT HH+R QSVW+W+ F  + PKG                                                       ERIF IYLGD
Subjt:  SSPLYNSDEDQATFHHYRLQSVWIWKQFLWLSPKGIRSIVFGCVFASFSTLADLVLVATVNVSVIGVYLVLCLWFLVAVELDDGFSFCSCERIFGIYLGD

Query:  YWKLAYGKRRTMVPGLPENGRADCEEDAWDDFLFSQRGKVSHQIVNDAVQEEKPFIISTPGMSPSALLEEVSESDRDNDICSVTPLQRLLKMVNVMSPKA
        +WKLAY K R M+PGL ENG  D E+ A ++FL+         IVNDA Q EK FI+STPGMSPS+LLEEV++SDRDND C VTPLQRL+KMVNVMSPKA
Subjt:  YWKLAYGKRRTMVPGLPENGRADCEEDAWDDFLFSQRGKVSHQIVNDAVQEEKPFIISTPGMSPSALLEEVSESDRDNDICSVTPLQRLLKMVNVMSPKA

Query:  LSASISDIDSIVCMTDRVASSAPLNKSKAEISEDLVGTVTSRLRKRCSIFGGSTGSRRTRHCRNTRMYTSSRRMMYCESYDLNSTFTERSR-IETPEHSH
        LSAS+SDIDSIVCMTDRV+SSAPLNKSK  +  DL GTV SRLR++CS FGG+ GSRRTRH          R +M CE +DL+S FT+RSR IETP+HS+
Subjt:  LSASISDIDSIVCMTDRVASSAPLNKSKAEISEDLVGTVTSRLRKRCSIFGGSTGSRRTRHCRNTRMYTSSRRMMYCESYDLNSTFTERSR-IETPEHSH

Query:  WRGFSLPFKQYLLEEIRKINEQLIDTVVSVCDKDMITTDNAATNDRSEGIIVECSFAAMRISSNKISQQASALQLTVHPLKLLVPKGYPHCSPIFNKLKL
        W GFSLP KQ LLEEIR+INEQLI T VS+CDKDM+TTD  AT  RSEGI+VECSF A+   S+ IS Q SA+QL +HPLKLLVP GYPH SPIF   K+
Subjt:  WRGFSLPFKQYLLEEIRKINEQLIDTVVSVCDKDMITTDNAATNDRSEGIIVECSFAAMRISSNKISQQASALQLTVHPLKLLVPKGYPHCSPIFNKLKL

Query:  EACPTDCEELSLKTREKFNMCVRSLPHPFSISEVARTWDACAREVVSEFAQRNGGGSFTSKYGSWEDCLHHA
        EACPT CE+LSL+ REKFNM VRSL HPFSISEVARTWD CAR+V+SE+A++NGGGSF+SKYGSWEDCLH A
Subjt:  EACPTDCEELSLKTREKFNMCVRSLPHPFSISEVARTWDACAREVVSEFAQRNGGGSFTSKYGSWEDCLHHA

A0A6J1JBE6 mediator of RNA polymerase II transcription subunit 15a-like1.7e-14660.59Show/hide
Query:  SSPLYNSDEDQATFHHYRLQSVWIWKQFLWLSPKGIRSIVFGCVFASFSTLADLVLVATVNVSVIGVYLVLCLWFLVAVELDDGFSFCSCERIFGIYLGD
        S  LYN+ ED+AT HH+R QSVW+W+ F  + PKG                                                       ERIF IYLGD
Subjt:  SSPLYNSDEDQATFHHYRLQSVWIWKQFLWLSPKGIRSIVFGCVFASFSTLADLVLVATVNVSVIGVYLVLCLWFLVAVELDDGFSFCSCERIFGIYLGD

Query:  YWKLAYGKRRTMVPGLPENGRADCEEDAWDDFLFSQRGKVSHQIVNDAVQEEKPFIISTPGMSPSALLEEVSESDRDNDICSVTPLQRLLKMVNVMSPKA
        +WKLAY K R M+PGL ENG  D E+ A +DFL+         IVNDA Q EK FI+STPGMSPS+LLEEV++SDRDND C VTPLQRL+KMVNVMSPKA
Subjt:  YWKLAYGKRRTMVPGLPENGRADCEEDAWDDFLFSQRGKVSHQIVNDAVQEEKPFIISTPGMSPSALLEEVSESDRDNDICSVTPLQRLLKMVNVMSPKA

Query:  LSASISDIDSIVCMTDRVASSAPLNKSKAEISEDLVGTVTSRLRKRCSIFGGSTGSRRTRHCRNTRMYTSSRRMMYCESYDLNSTFTERSR-IETPEHSH
        LSAS+SDIDSIVCMTDRV+SSAPLNKSK  +  DL GTV SRLR++CS FGG+ GSRRTRH          R +M CE +DL+S FT+RSR IETP+HS+
Subjt:  LSASISDIDSIVCMTDRVASSAPLNKSKAEISEDLVGTVTSRLRKRCSIFGGSTGSRRTRHCRNTRMYTSSRRMMYCESYDLNSTFTERSR-IETPEHSH

Query:  WRGFSLPFKQYLLEEIRKINEQLIDTVVSVCDKDMITTDNAATNDRSEGIIVECSFAAMRISSNKISQQASALQLTVHPLKLLVPKGYPHCSPIFNKLKL
        W GFSLP KQ LLEEIR+INEQLI T VS+CDKDM+TTD AAT  +SEGI+VECSF A+   S+ IS Q SA+QL + PLKLLVP GYPH SPIF   K+
Subjt:  WRGFSLPFKQYLLEEIRKINEQLIDTVVSVCDKDMITTDNAATNDRSEGIIVECSFAAMRISSNKISQQASALQLTVHPLKLLVPKGYPHCSPIFNKLKL

Query:  EACPTDCEELSLKTREKFNMCVRSLPHPFSISEVARTWDACAREVVSEFAQRNGGGSFTSKYGSWEDCLHHA
        EACPT CE+LSL+ REKFNM VRSL HPFSISE+ARTWD CAR+V+SE+A++NGGGSF+SKYGSWEDCLH A
Subjt:  EACPTDCEELSLKTREKFNMCVRSLPHPFSISEVARTWDACAREVVSEFAQRNGGGSFTSKYGSWEDCLHHA

SwissProt top hitse value%identityAlignment
F4I169 Probable mediator of RNA polymerase II transcription subunit 15b1.6e-0832.12Show/hide
Query:  EEDAWDDFLFSQRGKVSHQIVNDAVQEEKPFI-----ISTPGMSPSALLEEVSESDRD--NDICSV--------TPLQRLLKMVNVMSPKALSASISDID
        ++ + DD    Q   +S Q     VQ+ +  +     I TPG+S S LL E++  D +  N + S          P++RL++ +  +SP+ALS+++ DI 
Subjt:  EEDAWDDFLFSQRGKVSHQIVNDAVQEEKPFI-----ISTPGMSPSALLEEVSESDRD--NDICSV--------TPLQRLLKMVNVMSPKALSASISDID

Query:  SIVCMTDRVASSAPLNKSKAEISEDLVGTVTSRLRKR
        S+V M DR+A S P   S+A    DLV      L++R
Subjt:  SIVCMTDRVASSAPLNKSKAEISEDLVGTVTSRLRKR

F4I171 Mediator of RNA polymerase II transcription subunit 15a3.1e-4436.52Show/hide
Query:  GKVSHQIVNDAVQEEKPFIISTPGMSPSALLEEVSESDRDNDICSVT-----------PLQRLLKMVNVMSPKALSASISDIDSIVCMTDRVASSAPLNK
        G ++ Q         +   I TPG+S S LL+E +  D  N + S T           P++RL++ V  +SP+ALS+++SDI S+V M DR+A SAP N 
Subjt:  GKVSHQIVNDAVQEEKPFIISTPGMSPSALLEEVSESDRDNDICSVT-----------PLQRLLKMVNVMSPKALSASISDIDSIVCMTDRVASSAPLNK

Query:  SKAEISEDLVGTVTSRLRKR--CSIFGGSTGSRRTRHCRNTRMYTSS---------RRMMYCESYDLNSTFT---ERSRIETPEHSHWRGFSLPFKQYLL
        S+A + EDLV     RL+ R   +  G     +  RH     +  +S         ++    E+ DL ST T   +++R ET EH+            LL
Subjt:  SKAEISEDLVGTVTSRLRKR--CSIFGGSTGSRRTRHCRNTRMYTSS---------RRMMYCESYDLNSTFT---ERSRIETPEHSHWRGFSLPFKQYLL

Query:  EEIRKINEQLIDTVVSVCDKDMIT--TDNAATNDRSEGIIVECSFAAMRISSNKISQQASALQLTVHPLKLLVPKGYPHCSP-IFNKLKLEACPTDCEEL
        EEI++IN++LIDTVV + D +     ++ A ++   EG  V  SF A+ +S    +  +S     + PL+LLVP  YP+ SP + +KL +E    + E+L
Subjt:  EEIRKINEQLIDTVVSVCDKDMIT--TDNAATNDRSEGIIVECSFAAMRISSNKISQQASALQLTVHPLKLLVPKGYPHCSP-IFNKLKLEACPTDCEEL

Query:  SLKTREKFNMCVRSLPHPFSISEVARTWDACAREVVSEFAQRNGGGSFTSKYGSWE
        S K   +FN+ +RSL  P S+ ++A+TWDACAR V+ E+AQ+ GGG+F+SKYG+WE
Subjt:  SLKTREKFNMCVRSLPHPFSISEVARTWDACAREVVSEFAQRNGGGSFTSKYGSWE

Q9SHV7 Probable mediator of RNA polymerase II transcription subunit 15c4.0e-2831.08Show/hide
Query:  PLQRLLKMVNVMSPKALSASISDIDSIVCMTDRVASSAPLN-KSKAEISEDLVGTVTSRLRKRCSIFGGSTGSRRTRHCRNTRMYTSSRRMMYCESYDLN
        P+ RL+K     SPK+L+ S+S+I S++ M D +  S P +  S+A + EDL     S   +  +    +  S+R +   N      S ++   +SY+  
Subjt:  PLQRLLKMVNVMSPKALSASISDIDSIVCMTDRVASSAPLN-KSKAEISEDLVGTVTSRLRKRCSIFGGSTGSRRTRHCRNTRMYTSSRRMMYCESYDLN

Query:  STFTERSRIETPEHSHWRGFSLPFKQYLLEEIRKINEQLIDTVVSVCDKDMITTDNAATNDRSEGIIVECSFAAMRIS--------SNKISQQAS--ALQ
        S+    S + +   S  +  ++     LL+EI++ N +L++TVV +CD+D            S G IV C++A + +S        S KI    S   +Q
Subjt:  STFTERSRIETPEHSHWRGFSLPFKQYLLEEIRKINEQLIDTVVSVCDKDMITTDNAATNDRSEGIIVECSFAAMRIS--------SNKISQQAS--ALQ

Query:  LTVHPLKLLVPKGYPHCSPI-FNKLKLEACPTDCEELSLKTREKFNMCVRSLPHPFSISEVARTWDACAREVVSEFAQRNGGGSFTSKYGSWEDCL
          + PL+LL P  YP+ SPI   ++  +      E+LS +TR +F++ ++    P     +A+TW+ CAR  + E+A+R+GGG+F+SKYG+WE  L
Subjt:  LTVHPLKLLVPKGYPHCSPI-FNKLKLEACPTDCEELSLKTREKFNMCVRSLPHPFSISEVARTWDACAREVVSEFAQRNGGGSFTSKYGSWEDCL

Arabidopsis top hitse value%identityAlignment
AT1G15770.1 unknown protein1.1e-0932.12Show/hide
Query:  EEDAWDDFLFSQRGKVSHQIVNDAVQEEKPFI-----ISTPGMSPSALLEEVSESDRD--NDICSV--------TPLQRLLKMVNVMSPKALSASISDID
        ++ + DD    Q   +S Q     VQ+ +  +     I TPG+S S LL E++  D +  N + S          P++RL++ +  +SP+ALS+++ DI 
Subjt:  EEDAWDDFLFSQRGKVSHQIVNDAVQEEKPFI-----ISTPGMSPSALLEEVSESDRD--NDICSV--------TPLQRLLKMVNVMSPKALSASISDID

Query:  SIVCMTDRVASSAPLNKSKAEISEDLVGTVTSRLRKR
        S+V M DR+A S P   S+A    DLV      L++R
Subjt:  SIVCMTDRVASSAPLNKSKAEISEDLVGTVTSRLRKR

AT1G15780.1 unknown protein2.2e-4536.52Show/hide
Query:  GKVSHQIVNDAVQEEKPFIISTPGMSPSALLEEVSESDRDNDICSVT-----------PLQRLLKMVNVMSPKALSASISDIDSIVCMTDRVASSAPLNK
        G ++ Q         +   I TPG+S S LL+E +  D  N + S T           P++RL++ V  +SP+ALS+++SDI S+V M DR+A SAP N 
Subjt:  GKVSHQIVNDAVQEEKPFIISTPGMSPSALLEEVSESDRDNDICSVT-----------PLQRLLKMVNVMSPKALSASISDIDSIVCMTDRVASSAPLNK

Query:  SKAEISEDLVGTVTSRLRKR--CSIFGGSTGSRRTRHCRNTRMYTSS---------RRMMYCESYDLNSTFT---ERSRIETPEHSHWRGFSLPFKQYLL
        S+A + EDLV     RL+ R   +  G     +  RH     +  +S         ++    E+ DL ST T   +++R ET EH+            LL
Subjt:  SKAEISEDLVGTVTSRLRKR--CSIFGGSTGSRRTRHCRNTRMYTSS---------RRMMYCESYDLNSTFT---ERSRIETPEHSHWRGFSLPFKQYLL

Query:  EEIRKINEQLIDTVVSVCDKDMIT--TDNAATNDRSEGIIVECSFAAMRISSNKISQQASALQLTVHPLKLLVPKGYPHCSP-IFNKLKLEACPTDCEEL
        EEI++IN++LIDTVV + D +     ++ A ++   EG  V  SF A+ +S    +  +S     + PL+LLVP  YP+ SP + +KL +E    + E+L
Subjt:  EEIRKINEQLIDTVVSVCDKDMIT--TDNAATNDRSEGIIVECSFAAMRISSNKISQQASALQLTVHPLKLLVPKGYPHCSP-IFNKLKLEACPTDCEEL

Query:  SLKTREKFNMCVRSLPHPFSISEVARTWDACAREVVSEFAQRNGGGSFTSKYGSWE
        S K   +FN+ +RSL  P S+ ++A+TWDACAR V+ E+AQ+ GGG+F+SKYG+WE
Subjt:  SLKTREKFNMCVRSLPHPFSISEVARTWDACAREVVSEFAQRNGGGSFTSKYGSWE

AT2G10440.1 unknown protein2.9e-2931.08Show/hide
Query:  PLQRLLKMVNVMSPKALSASISDIDSIVCMTDRVASSAPLN-KSKAEISEDLVGTVTSRLRKRCSIFGGSTGSRRTRHCRNTRMYTSSRRMMYCESYDLN
        P+ RL+K     SPK+L+ S+S+I S++ M D +  S P +  S+A + EDL     S   +  +    +  S+R +   N      S ++   +SY+  
Subjt:  PLQRLLKMVNVMSPKALSASISDIDSIVCMTDRVASSAPLN-KSKAEISEDLVGTVTSRLRKRCSIFGGSTGSRRTRHCRNTRMYTSSRRMMYCESYDLN

Query:  STFTERSRIETPEHSHWRGFSLPFKQYLLEEIRKINEQLIDTVVSVCDKDMITTDNAATNDRSEGIIVECSFAAMRIS--------SNKISQQAS--ALQ
        S+    S + +   S  +  ++     LL+EI++ N +L++TVV +CD+D            S G IV C++A + +S        S KI    S   +Q
Subjt:  STFTERSRIETPEHSHWRGFSLPFKQYLLEEIRKINEQLIDTVVSVCDKDMITTDNAATNDRSEGIIVECSFAAMRIS--------SNKISQQAS--ALQ

Query:  LTVHPLKLLVPKGYPHCSPI-FNKLKLEACPTDCEELSLKTREKFNMCVRSLPHPFSISEVARTWDACAREVVSEFAQRNGGGSFTSKYGSWEDCL
          + PL+LL P  YP+ SPI   ++  +      E+LS +TR +F++ ++    P     +A+TW+ CAR  + E+A+R+GGG+F+SKYG+WE  L
Subjt:  LTVHPLKLLVPKGYPHCSPI-FNKLKLEACPTDCEELSLKTREKFNMCVRSLPHPFSISEVARTWDACAREVVSEFAQRNGGGSFTSKYGSWEDCL

AT2G10440.2 unknown protein4.4e-3030.77Show/hide
Query:  PLQRLLKMVNVMSPKALSASISDIDSIVCMTDRVASSAPLN-KSKAEISEDLVGTVTSRLRKRCSIFGGSTGSRRTRHCRNTRMYTSSRRMMYCESYDLN
        P+ RL+K     SPK+L+ S+S+I S++ M D +  S P +  S+A + EDL     S   +  +    +  S+R +   N      S ++   +SY+  
Subjt:  PLQRLLKMVNVMSPKALSASISDIDSIVCMTDRVASSAPLN-KSKAEISEDLVGTVTSRLRKRCSIFGGSTGSRRTRHCRNTRMYTSSRRMMYCESYDLN

Query:  STFTERSRIETPEHSHWRGFSLPFKQYLLEEIRKINEQLIDTVVSVCDKDMITTDNAATNDRSEGIIVECSFAAMRISSNKISQQASALQLTVHPLKLLV
        S+    S + +   S  +  ++     LL+EI++ N +L++TVV +CD+D            S G IV C++A + +S+       S     + PL+LL 
Subjt:  STFTERSRIETPEHSHWRGFSLPFKQYLLEEIRKINEQLIDTVVSVCDKDMITTDNAATNDRSEGIIVECSFAAMRISSNKISQQASALQLTVHPLKLLV

Query:  PKGYPHCSPI-FNKLKLEACPTDCEELSLKTREKFNMCVRSLPHPFSISEVARTWDACAREVVSEFAQRNGGGSFTSKYGSWEDCL
        P  YP+ SPI   ++  +      E+LS +TR +F++ ++    P     +A+TW+ CAR  + E+A+R+GGG+F+SKYG+WE  L
Subjt:  PKGYPHCSPI-FNKLKLEACPTDCEELSLKTREKFNMCVRSLPHPFSISEVARTWDACAREVVSEFAQRNGGGSFTSKYGSWEDCL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTCATCGCCACTATATAACTCCGATGAAGATCAAGCAACTTTCCACCATTACCGCCTTCAATCGGTTTGGATATGGAAGCAATTCTTGTGGCTGAGCCCTAAAGG
TATTCGATCAATCGTTTTTGGTTGCGTTTTTGCCTCATTCTCAACTCTCGCTGATCTTGTTCTTGTTGCGACTGTGAATGTTTCTGTAATCGGCGTCTATTTAGTGCTAT
GTTTGTGGTTTCTTGTGGCAGTTGAGTTAGATGATGGTTTTTCGTTTTGTTCTTGTGAAAGGATCTTTGGAATCTATTTGGGCGATTATTGGAAATTAGCTTACGGGAAG
AGGAGGACGATGGTGCCTGGTTTACCTGAAAATGGAAGAGCTGATTGCGAGGAGGATGCCTGGGATGATTTTTTATTCTCACAAAGAGGAAAGGTGTCTCATCAAATAGT
AAATGATGCAGTCCAAGAAGAAAAACCTTTCATCATCTCCACCCCTGGCATGTCTCCTTCAGCCCTTTTGGAAGAAGTATCAGAATCAGATCGTGATAATGACATATGTT
CTGTTACTCCTCTTCAACGTTTGCTTAAAATGGTAAACGTAATGTCACCTAAAGCATTAAGTGCTTCTATTAGTGACATAGATTCTATTGTCTGTATGACTGACAGAGTT
GCTTCATCAGCGCCCCTAAACAAGTCCAAAGCTGAAATTAGCGAGGATTTGGTGGGCACGGTAACATCTCGTCTGAGAAAAAGATGTTCAATATTTGGAGGCAGTACAGG
ATCAAGAAGAACAAGACACTGCAGGAATACCAGGATGTATACCAGCTCCAGACGAATGATGTATTGTGAAAGTTATGACTTGAATTCAACATTTACAGAAAGGTCAAGAA
TCGAGACTCCTGAACATTCCCATTGGCGTGGGTTTTCATTGCCGTTCAAGCAATATTTATTAGAAGAAATTAGGAAGATAAATGAGCAGCTGATAGACACAGTGGTGTCT
GTATGTGACAAAGATATGATAACAACTGATAATGCAGCTACAAATGACAGAAGTGAAGGGATCATAGTCGAGTGTTCTTTTGCTGCTATGCGCATCAGTTCGAATAAAAT
CTCACAGCAAGCTTCAGCCCTTCAGTTAACAGTCCATCCCTTGAAGTTGCTAGTTCCCAAAGGCTATCCACACTGTTCTCCAATATTCAATAAATTGAAACTGGAAGCTT
GTCCAACAGATTGTGAAGAGCTTTCATTGAAGACAAGGGAAAAGTTCAACATGTGTGTCCGAAGCCTTCCACATCCATTCTCCATAAGTGAAGTGGCGAGAACGTGGGAT
GCGTGTGCTCGAGAAGTGGTTTCGGAGTTTGCTCAACGAAATGGCGGCGGCAGTTTCACTTCAAAATATGGCTCCTGGGAGGACTGTCTTCACCATGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCTCATCGCCACTATATAACTCCGATGAAGATCAAGCAACTTTCCACCATTACCGCCTTCAATCGGTTTGGATATGGAAGCAATTCTTGTGGCTGAGCCCTAAAGG
TATTCGATCAATCGTTTTTGGTTGCGTTTTTGCCTCATTCTCAACTCTCGCTGATCTTGTTCTTGTTGCGACTGTGAATGTTTCTGTAATCGGCGTCTATTTAGTGCTAT
GTTTGTGGTTTCTTGTGGCAGTTGAGTTAGATGATGGTTTTTCGTTTTGTTCTTGTGAAAGGATCTTTGGAATCTATTTGGGCGATTATTGGAAATTAGCTTACGGGAAG
AGGAGGACGATGGTGCCTGGTTTACCTGAAAATGGAAGAGCTGATTGCGAGGAGGATGCCTGGGATGATTTTTTATTCTCACAAAGAGGAAAGGTGTCTCATCAAATAGT
AAATGATGCAGTCCAAGAAGAAAAACCTTTCATCATCTCCACCCCTGGCATGTCTCCTTCAGCCCTTTTGGAAGAAGTATCAGAATCAGATCGTGATAATGACATATGTT
CTGTTACTCCTCTTCAACGTTTGCTTAAAATGGTAAACGTAATGTCACCTAAAGCATTAAGTGCTTCTATTAGTGACATAGATTCTATTGTCTGTATGACTGACAGAGTT
GCTTCATCAGCGCCCCTAAACAAGTCCAAAGCTGAAATTAGCGAGGATTTGGTGGGCACGGTAACATCTCGTCTGAGAAAAAGATGTTCAATATTTGGAGGCAGTACAGG
ATCAAGAAGAACAAGACACTGCAGGAATACCAGGATGTATACCAGCTCCAGACGAATGATGTATTGTGAAAGTTATGACTTGAATTCAACATTTACAGAAAGGTCAAGAA
TCGAGACTCCTGAACATTCCCATTGGCGTGGGTTTTCATTGCCGTTCAAGCAATATTTATTAGAAGAAATTAGGAAGATAAATGAGCAGCTGATAGACACAGTGGTGTCT
GTATGTGACAAAGATATGATAACAACTGATAATGCAGCTACAAATGACAGAAGTGAAGGGATCATAGTCGAGTGTTCTTTTGCTGCTATGCGCATCAGTTCGAATAAAAT
CTCACAGCAAGCTTCAGCCCTTCAGTTAACAGTCCATCCCTTGAAGTTGCTAGTTCCCAAAGGCTATCCACACTGTTCTCCAATATTCAATAAATTGAAACTGGAAGCTT
GTCCAACAGATTGTGAAGAGCTTTCATTGAAGACAAGGGAAAAGTTCAACATGTGTGTCCGAAGCCTTCCACATCCATTCTCCATAAGTGAAGTGGCGAGAACGTGGGAT
GCGTGTGCTCGAGAAGTGGTTTCGGAGTTTGCTCAACGAAATGGCGGCGGCAGTTTCACTTCAAAATATGGCTCCTGGGAGGACTGTCTTCACCATGCATAG
Protein sequenceShow/hide protein sequence
MSSSPLYNSDEDQATFHHYRLQSVWIWKQFLWLSPKGIRSIVFGCVFASFSTLADLVLVATVNVSVIGVYLVLCLWFLVAVELDDGFSFCSCERIFGIYLGDYWKLAYGK
RRTMVPGLPENGRADCEEDAWDDFLFSQRGKVSHQIVNDAVQEEKPFIISTPGMSPSALLEEVSESDRDNDICSVTPLQRLLKMVNVMSPKALSASISDIDSIVCMTDRV
ASSAPLNKSKAEISEDLVGTVTSRLRKRCSIFGGSTGSRRTRHCRNTRMYTSSRRMMYCESYDLNSTFTERSRIETPEHSHWRGFSLPFKQYLLEEIRKINEQLIDTVVS
VCDKDMITTDNAATNDRSEGIIVECSFAAMRISSNKISQQASALQLTVHPLKLLVPKGYPHCSPIFNKLKLEACPTDCEELSLKTREKFNMCVRSLPHPFSISEVARTWD
ACAREVVSEFAQRNGGGSFTSKYGSWEDCLHHA