; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g35570 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g35570
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionprotein LATERAL ROOT PRIMORDIUM 1
Genome locationchr9:27293530..27294987
RNA-Seq ExpressionMoc09g35570
SyntenyMoc09g35570
Gene Ontology termsGO:0009734 - auxin-activated signaling pathway (biological process)
GO:0009851 - auxin biosynthetic process (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR006510 - Zinc finger, lateral root primordium type 1
IPR006511 - SHORT INTERNODES, C-terminal
IPR007818 - SHI protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034761.1 protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo var. makuwa]4.5e-13482.15Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLP--QPPPPPPPAAEVSER-RGVDNLKRTQDFGFGKGDSLIAG-
        MLGLRDVLFIAPTPSSLHQQ TQIISSDHHPSLPLPSS ALGVSVGIFPLLAATPCLP  QPPP      +V++R R  DNLKRTQDFGFGKG+SLI G 
Subjt:  MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLP--QPPPPPPPAAEVSER-RGVDNLKRTQDFGFGKGDSLIAG-

Query:  GNNALDEPVRGDAGDSSMGVCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS
        GNN  DE V+GDAGD SM VCRDCGNRAKKEC+YRRCRTCCKGRGNHCSTHVKSTWV AARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS
Subjt:  GNNALDEPVRGDAGDSSMGVCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS

Query:  QSTAAAAAASASHASTSNATTPRSFETSSNHQ----------------DASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYD
        QS AAAAA     ASTSNATTPRSFET+S+HQ                DASFKKSLPG VRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYD
Subjt:  QSTAAAAAASASHASTSNATTPRSFETSSNHQ----------------DASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYD

Query:  QGIDDKNGFPSVSHLHLESGNHHHK
        QG DDKN FPS+SHLHL+SGNHH +
Subjt:  QGIDDKNGFPSVSHLHLESGNHHHK

XP_004142483.1 protein LATERAL ROOT PRIMORDIUM 1 [Cucumis sativus]1.1e-13786.73Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLP--QPPPPPPPAAEVSER-RGVDNLKRTQDFGFGKGDSLIAG-
        MLGLRDVLFIAPTPSSLHQQ TQIISSDHHPSLPLPSS ALGVSVGIFPLLAATPCLP  QPPP      +V++R R  DNLKRTQDFGFGKG+SLIAG 
Subjt:  MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLP--QPPPPPPPAAEVSER-RGVDNLKRTQDFGFGKGDSLIAG-

Query:  GNNALDEPVRGDAGDSSMGVCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS
        GNN  DE V+GDAGD SM VCRDCGNRAKKEC+YRRCRTCCKGRGNHCSTHVKSTWV AARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS
Subjt:  GNNALDEPVRGDAGDSSMGVCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS

Query:  QSTAAAAAASASHASTSNATTPRSFETSSNHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLH
        QS AAAAA     ASTSNATTPRSFET+S+HQDASFKKSLPG VRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG DDKN FPS+SHLH
Subjt:  QSTAAAAAASASHASTSNATTPRSFETSSNHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLH

Query:  LESGNHHHK
        L+SGNHH +
Subjt:  LESGNHHHK

XP_008446964.1 PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo]3.3e-13786.41Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLP--QPPPPPPPAAEVSER-RGVDNLKRTQDFGFGKGDSLIAG-
        MLGLRDVLFIAPTPSSLHQQ TQIISSDHHPSLPLPSS ALGVSVGIFPLLAATPCLP  QPPP      +V++R R  DNLKRTQDFGFGKG+SLI G 
Subjt:  MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLP--QPPPPPPPAAEVSER-RGVDNLKRTQDFGFGKGDSLIAG-

Query:  GNNALDEPVRGDAGDSSMGVCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS
        GNN  DE V+GDAGD SM VCRDCGNRAKKEC+YRRCRTCCKGRGNHCSTHVKSTWV AARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS
Subjt:  GNNALDEPVRGDAGDSSMGVCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS

Query:  QSTAAAAAASASHASTSNATTPRSFETSSNHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLH
        QS AAAAA     ASTSNATTPRSFET+S+HQDASFKKSLPG VRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG DDKN FPS+SHLH
Subjt:  QSTAAAAAASASHASTSNATTPRSFETSSNHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLH

Query:  LESGNHHHK
        L+SGNHH +
Subjt:  LESGNHHHK

XP_022138928.1 protein LATERAL ROOT PRIMORDIUM 1 [Momordica charantia]8.7e-170100Show/hide
Query:  MNRTMLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPQPPPPPPPAAEVSERRGVDNLKRTQDFGFGKGDSLIAG
        MNRTMLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPQPPPPPPPAAEVSERRGVDNLKRTQDFGFGKGDSLIAG
Subjt:  MNRTMLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPQPPPPPPPAAEVSERRGVDNLKRTQDFGFGKGDSLIAG

Query:  GNNALDEPVRGDAGDSSMGVCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS
        GNNALDEPVRGDAGDSSMGVCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS
Subjt:  GNNALDEPVRGDAGDSSMGVCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS

Query:  QSTAAAAAASASHASTSNATTPRSFETSSNHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLH
        QSTAAAAAASASHASTSNATTPRSFETSSNHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLH
Subjt:  QSTAAAAAASASHASTSNATTPRSFETSSNHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLH

Query:  LESGNHHHKE
        LESGNHHHKE
Subjt:  LESGNHHHKE

XP_038892899.1 protein LATERAL ROOT PRIMORDIUM 1 [Benincasa hispida]5.1e-13886.93Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPQPPP-PPPPAAEVSER-RGVDNLKRTQDFGFGKGDSLIAG-G
        MLGLRDVLFIAPTPSSLHQQ TQIISSDHHPSLPLPSSAALGVSVGIFPLL ATPCLP P P P   A +V++R R ++NLKRTQDFGFGKGDSL+ G G
Subjt:  MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPQPPP-PPPPAAEVSER-RGVDNLKRTQDFGFGKGDSLIAG-G

Query:  NNALDEPVRGDAGDSSMGVCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
        NN  DE V+GDAGD SM VCRDCGNRAKKEC+YRRCRTCCKGRGNHCSTHVKSTWV AARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
Subjt:  NNALDEPVRGDAGDSSMGVCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ

Query:  STAAAAAASASHASTSNATTPRSFETSSNHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLHL
        STAAAAA     ASTSNATTPRSFET+S+HQDASFKKSLPG VRAPAVFRCHRVTAI+SGEGELAYQATVNIGGHVFKGFLYDQG DDKN FPS+SHLHL
Subjt:  STAAAAAASASHASTSNATTPRSFETSSNHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLHL

Query:  ESGNHH
        +SGNHH
Subjt:  ESGNHH

TrEMBL top hitse value%identityAlignment
A0A0A0KWX6 Uncharacterized protein5.6e-13886.73Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLP--QPPPPPPPAAEVSER-RGVDNLKRTQDFGFGKGDSLIAG-
        MLGLRDVLFIAPTPSSLHQQ TQIISSDHHPSLPLPSS ALGVSVGIFPLLAATPCLP  QPPP      +V++R R  DNLKRTQDFGFGKG+SLIAG 
Subjt:  MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLP--QPPPPPPPAAEVSER-RGVDNLKRTQDFGFGKGDSLIAG-

Query:  GNNALDEPVRGDAGDSSMGVCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS
        GNN  DE V+GDAGD SM VCRDCGNRAKKEC+YRRCRTCCKGRGNHCSTHVKSTWV AARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS
Subjt:  GNNALDEPVRGDAGDSSMGVCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS

Query:  QSTAAAAAASASHASTSNATTPRSFETSSNHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLH
        QS AAAAA     ASTSNATTPRSFET+S+HQDASFKKSLPG VRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG DDKN FPS+SHLH
Subjt:  QSTAAAAAASASHASTSNATTPRSFETSSNHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLH

Query:  LESGNHHHK
        L+SGNHH +
Subjt:  LESGNHHHK

A0A1S3BFS5 protein LATERAL ROOT PRIMORDIUM 11.6e-13786.41Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLP--QPPPPPPPAAEVSER-RGVDNLKRTQDFGFGKGDSLIAG-
        MLGLRDVLFIAPTPSSLHQQ TQIISSDHHPSLPLPSS ALGVSVGIFPLLAATPCLP  QPPP      +V++R R  DNLKRTQDFGFGKG+SLI G 
Subjt:  MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLP--QPPPPPPPAAEVSER-RGVDNLKRTQDFGFGKGDSLIAG-

Query:  GNNALDEPVRGDAGDSSMGVCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS
        GNN  DE V+GDAGD SM VCRDCGNRAKKEC+YRRCRTCCKGRGNHCSTHVKSTWV AARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS
Subjt:  GNNALDEPVRGDAGDSSMGVCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS

Query:  QSTAAAAAASASHASTSNATTPRSFETSSNHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLH
        QS AAAAA     ASTSNATTPRSFET+S+HQDASFKKSLPG VRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG DDKN FPS+SHLH
Subjt:  QSTAAAAAASASHASTSNATTPRSFETSSNHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLH

Query:  LESGNHHHK
        L+SGNHH +
Subjt:  LESGNHHHK

A0A5D3CCT8 Protein LATERAL ROOT PRIMORDIUM 12.2e-13482.15Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLP--QPPPPPPPAAEVSER-RGVDNLKRTQDFGFGKGDSLIAG-
        MLGLRDVLFIAPTPSSLHQQ TQIISSDHHPSLPLPSS ALGVSVGIFPLLAATPCLP  QPPP      +V++R R  DNLKRTQDFGFGKG+SLI G 
Subjt:  MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLP--QPPPPPPPAAEVSER-RGVDNLKRTQDFGFGKGDSLIAG-

Query:  GNNALDEPVRGDAGDSSMGVCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS
        GNN  DE V+GDAGD SM VCRDCGNRAKKEC+YRRCRTCCKGRGNHCSTHVKSTWV AARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS
Subjt:  GNNALDEPVRGDAGDSSMGVCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS

Query:  QSTAAAAAASASHASTSNATTPRSFETSSNHQ----------------DASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYD
        QS AAAAA     ASTSNATTPRSFET+S+HQ                DASFKKSLPG VRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYD
Subjt:  QSTAAAAAASASHASTSNATTPRSFETSSNHQ----------------DASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYD

Query:  QGIDDKNGFPSVSHLHLESGNHHHK
        QG DDKN FPS+SHLHL+SGNHH +
Subjt:  QGIDDKNGFPSVSHLHLESGNHHHK

A0A6J1CEG6 protein LATERAL ROOT PRIMORDIUM 14.2e-170100Show/hide
Query:  MNRTMLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPQPPPPPPPAAEVSERRGVDNLKRTQDFGFGKGDSLIAG
        MNRTMLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPQPPPPPPPAAEVSERRGVDNLKRTQDFGFGKGDSLIAG
Subjt:  MNRTMLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPQPPPPPPPAAEVSERRGVDNLKRTQDFGFGKGDSLIAG

Query:  GNNALDEPVRGDAGDSSMGVCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS
        GNNALDEPVRGDAGDSSMGVCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS
Subjt:  GNNALDEPVRGDAGDSSMGVCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS

Query:  QSTAAAAAASASHASTSNATTPRSFETSSNHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLH
        QSTAAAAAASASHASTSNATTPRSFETSSNHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLH
Subjt:  QSTAAAAAASASHASTSNATTPRSFETSSNHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLH

Query:  LESGNHHHKE
        LESGNHHHKE
Subjt:  LESGNHHHKE

A0A6J1GXY1 protein LATERAL ROOT PRIMORDIUM 1-like1.4e-12882.51Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPQPPPPPPPAAEVSERRGVDNLKRTQDFGFGKGDSLI-AGGNN
        MLGLRDVLFIAPTPSSLHQ  TQIISSDHHPSLPLPSS ALGVSVGIFPLLAATPCL QPPP   P       R ++NLKRTQDFGFGKGDSLI  GGN+
Subjt:  MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPQPPPPPPPAAEVSERRGVDNLKRTQDFGFGKGDSLI-AGGNN

Query:  ALDEPVRGDAGDSSMGVCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQST
          D+ V+GD GD S+GVCRDCGNRAKKEC+YRRCRTCCKGRGNHCSTHVKSTWV A+RRRERQMLVVMDGVAT+    GSSGSSSAGAKRP+VLIPSQ+T
Subjt:  ALDEPVRGDAGDSSMGVCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQST

Query:  AAAAAASASHASTSNATTPRSFETSSNHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLHLES
        AAAAA     ASTSNATTPRSFET+S+HQDASFKKSLPGQV+APAVF+CHRVTAISSGEGEL YQATVNIGGHVFKGFLYDQG D KN  PS+SHLHLES
Subjt:  AAAAAASASHASTSNATTPRSFETSSNHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLHLES

Query:  GNH
        GNH
Subjt:  GNH

SwissProt top hitse value%identityAlignment
O65517 Protein SHI RELATED SEQUENCE 21.2e-2843.68Show/hide
Query:  CRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTAAAAAASASHASTSNAT
        CRDCGN+AKK+C + RCRTCCK RG  CSTHV+STW+  ARRRERQ  + M    + SG GG SGS  AG           S+        +   TS+++
Subjt:  CRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTAAAAAASASHASTSNAT

Query:  TPRSFETSSNHQDASFKKSLPGQVRAPAVFRCHRVTAI-SSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLHLESGNHHHK
           S        +ASF    PG+V + A+FRC +++ +   G+G+ AYQ TVNIGGH+FKG LYDQG       P  S++   SG   H+
Subjt:  TPRSFETSSNHQDASFKKSLPGQVRAPAVFRCHRVTAI-SSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLHLESGNHHHK

Q94CK9 Protein LATERAL ROOT PRIMORDIUM 17.4e-5547.42Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPQPPPPPPPAAEVSERR---GVDNLKRTQDFGFGKGDSLIAG-
        M+GLRDV  +AP   + H Q   +IS   H +    ++AALG  VG+ PLL A    PQ          +   R     +N   TQ   F   +    G 
Subjt:  MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPQPPPPPPPAAEVSERR---GVDNLKRTQDFGFGKGDSLIAG-

Query:  -GNNALDEPVRGDAGDSSMGVCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIP
          NN+        +G S    C+DCGN+AKKEC  RRCRTCCK RG  CSTHVKSTWVSAARRRERQ++        A+   GSS S+S+G K+PR++  
Subjt:  -GNNALDEPVRGDAGDSSMGVCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIP

Query:  SQSTAAAAAASASHASTSNATTPRSFETSSNHQD-ASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSH
         Q     A    SH STSN T P+SFETSS+ QD    +++ PGQVRA AVF+C RVTA+  G+ E AYQA V IGGHVFKGFLYDQG++ K GFPS+S 
Subjt:  SQSTAAAAAASASHASTSNATTPRSFETSSNHQD-ASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSH

Query:  LHLESGNHHH
        LHL    ++H
Subjt:  LHLESGNHHH

Q9FXH7 Protein SHI RELATED SEQUENCE 72.9e-2740.87Show/hide
Query:  EPVRGDAGDSSMG-----VCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQ-MLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS
        EPVR   G  ++       C+DCGN+AKK+C + RCRTCCK RG  C THVKSTWVSAA+RRERQ  L V+        +    G      K        
Subjt:  EPVRGDAGDSSMG-----VCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQ-MLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS

Query:  QSTAAAAAASASHASTSNATTPRSFETSSNHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLH
           +A A     +AS+S   T                  LP ++ +PAVFRC RV++I   + E AYQ  V+IGGHVFKG LYDQG    +   S S L+
Subjt:  QSTAAAAAASASHASTSNATTPRSFETSSNHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLH

Query:  LESGNHHH
         E+ + HH
Subjt:  LESGNHHH

Q9M2U4 Protein SHI RELATED SEQUENCE 69.1e-2941.34Show/hide
Query:  VCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTAAAAAASASHASTSNA
        VCRDCGNRAKKEC + RCRTCCK RG +C THVKSTW+ ++  R                      SSS   ++ ++ I  QS+   +            
Subjt:  VCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTAAAAAASASHASTSNA

Query:  TTPRSFETSSNHQDASFKKSLPGQVRAPAVFRCHRVTAISSGE-GELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVS
               T+++ Q+  F++ LPG++ APAVF+  RVTAIS+ E  E+ YQATV I GH+FKGFL+  G+D    FP +S
Subjt:  TTPRSFETSSNHQDASFKKSLPGQVRAPAVFRCHRVTAISSGE-GELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVS

Q9SD40 Protein SHI RELATED SEQUENCE 13.8e-2742.08Show/hide
Query:  GDAGDSSMGV-CRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTAAAAAA
        G +G  S GV C+DCGN+AKK+C + RCRTCCK RG  CSTHV+STWV AA+RRERQ  +      T    G S        KR R  +P+ S++     
Subjt:  GDAGDSSMGV-CRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTAAAAAA

Query:  SASHASTSNATTPRSFETSSNHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNG
          SH+                        + P +V + AVFRC RV+++  GE E AYQ  V+IGGH+FKG LYD G     G
Subjt:  SASHASTSNATTPRSFETSSNHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNG

Arabidopsis top hitse value%identityAlignment
AT4G36260.1 Lateral root primordium (LRP) protein-related8.5e-3043.68Show/hide
Query:  CRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTAAAAAASASHASTSNAT
        CRDCGN+AKK+C + RCRTCCK RG  CSTHV+STW+  ARRRERQ  + M    + SG GG SGS  AG           S+        +   TS+++
Subjt:  CRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTAAAAAASASHASTSNAT

Query:  TPRSFETSSNHQDASFKKSLPGQVRAPAVFRCHRVTAI-SSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLHLESGNHHHK
           S        +ASF    PG+V + A+FRC +++ +   G+G+ AYQ TVNIGGH+FKG LYDQG       P  S++   SG   H+
Subjt:  TPRSFETSSNHQDASFKKSLPGQVRAPAVFRCHRVTAI-SSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLHLESGNHHHK

AT5G12330.1 Lateral root primordium (LRP) protein-related5.3e-5647.42Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPQPPPPPPPAAEVSERR---GVDNLKRTQDFGFGKGDSLIAG-
        M+GLRDV  +AP   + H Q   +IS   H +    ++AALG  VG+ PLL A    PQ          +   R     +N   TQ   F   +    G 
Subjt:  MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPQPPPPPPPAAEVSERR---GVDNLKRTQDFGFGKGDSLIAG-

Query:  -GNNALDEPVRGDAGDSSMGVCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIP
          NN+        +G S    C+DCGN+AKKEC  RRCRTCCK RG  CSTHVKSTWVSAARRRERQ++        A+   GSS S+S+G K+PR++  
Subjt:  -GNNALDEPVRGDAGDSSMGVCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIP

Query:  SQSTAAAAAASASHASTSNATTPRSFETSSNHQD-ASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSH
         Q     A    SH STSN T P+SFETSS+ QD    +++ PGQVRA AVF+C RVTA+  G+ E AYQA V IGGHVFKGFLYDQG++ K GFPS+S 
Subjt:  SQSTAAAAAASASHASTSNATTPRSFETSSNHQD-ASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSH

Query:  LHLESGNHHH
        LHL    ++H
Subjt:  LHLESGNHHH

AT5G12330.2 Lateral root primordium (LRP) protein-related5.3e-5647.42Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPQPPPPPPPAAEVSERR---GVDNLKRTQDFGFGKGDSLIAG-
        M+GLRDV  +AP   + H Q   +IS   H +    ++AALG  VG+ PLL A    PQ          +   R     +N   TQ   F   +    G 
Subjt:  MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPQPPPPPPPAAEVSERR---GVDNLKRTQDFGFGKGDSLIAG-

Query:  -GNNALDEPVRGDAGDSSMGVCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIP
          NN+        +G S    C+DCGN+AKKEC  RRCRTCCK RG  CSTHVKSTWVSAARRRERQ++        A+   GSS S+S+G K+PR++  
Subjt:  -GNNALDEPVRGDAGDSSMGVCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIP

Query:  SQSTAAAAAASASHASTSNATTPRSFETSSNHQD-ASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSH
         Q     A    SH STSN T P+SFETSS+ QD    +++ PGQVRA AVF+C RVTA+  G+ E AYQA V IGGHVFKGFLYDQG++ K GFPS+S 
Subjt:  SQSTAAAAAASASHASTSNATTPRSFETSSNHQD-ASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSH

Query:  LHLESGNHHH
        LHL    ++H
Subjt:  LHLESGNHHH

AT5G12330.3 Lateral root primordium (LRP) protein-related4.2e-2943.57Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPQPPPPPPPAAEVSERR---GVDNLKRTQDFGFGKGDSLIAG-
        M+GLRDV  +AP   + H Q   +IS   H +    ++AALG  VG+ PLL A    PQ          +   R     +N   TQ   F   +    G 
Subjt:  MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPQPPPPPPPAAEVSERR---GVDNLKRTQDFGFGKGDSLIAG-

Query:  -GNNALDEPVRGDAGDSSMGVCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIP
          NN+        +G S    C+DCGN+AKKEC  RRCRTCCK RG  CSTHVKSTWVSAARRRERQ++        A+   GSS S+S+G K+PR++  
Subjt:  -GNNALDEPVRGDAGDSSMGVCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIP

Query:  SQSTAAAAAASASHASTSNATTPRSFETSSNHQDASFKKSL
         Q     A    SH STSN T P+SFETSS+ Q  SF  SL
Subjt:  SQSTAAAAAASASHASTSNATTPRSFETSSNHQDASFKKSL

AT5G12330.4 Lateral root primordium (LRP) protein-related5.3e-5647.42Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPQPPPPPPPAAEVSERR---GVDNLKRTQDFGFGKGDSLIAG-
        M+GLRDV  +AP   + H Q   +IS   H +    ++AALG  VG+ PLL A    PQ          +   R     +N   TQ   F   +    G 
Subjt:  MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPQPPPPPPPAAEVSERR---GVDNLKRTQDFGFGKGDSLIAG-

Query:  -GNNALDEPVRGDAGDSSMGVCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIP
          NN+        +G S    C+DCGN+AKKEC  RRCRTCCK RG  CSTHVKSTWVSAARRRERQ++        A+   GSS S+S+G K+PR++  
Subjt:  -GNNALDEPVRGDAGDSSMGVCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIP

Query:  SQSTAAAAAASASHASTSNATTPRSFETSSNHQD-ASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSH
         Q     A    SH STSN T P+SFETSS+ QD    +++ PGQVRA AVF+C RVTA+  G+ E AYQA V IGGHVFKGFLYDQG++ K GFPS+S 
Subjt:  SQSTAAAAAASASHASTSNATTPRSFETSSNHQD-ASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSH

Query:  LHLESGNHHH
        LHL    ++H
Subjt:  LHLESGNHHH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAGGACAATGTTGGGTCTCCGAGATGTTCTCTTTATAGCTCCCACGCCTTCTTCTCTCCATCAACAGACAACCCAAATCATTTCCTCCGATCACCACCCATCTCT
TCCTCTCCCTTCCTCCGCCGCTCTCGGCGTCAGCGTCGGCATTTTCCCCCTTCTCGCTGCAACCCCATGTCTCCCTCAGCCGCCGCCGCCGCCGCCCCCGGCCGCCGAAG
TTAGCGAGCGCAGGGGTGTGGACAATCTGAAGAGAACCCAGGATTTCGGATTCGGGAAAGGGGATTCGTTGATCGCCGGCGGGAATAATGCCCTCGACGAGCCGGTGAGA
GGCGACGCCGGCGATTCCTCCATGGGCGTGTGTAGGGACTGCGGAAACAGAGCCAAAAAGGAGTGCGATTATCGGAGGTGCAGGACGTGTTGTAAAGGGCGTGGGAATCA
TTGCTCCACGCACGTCAAGAGCACGTGGGTGTCGGCGGCTCGCCGCCGTGAGCGGCAGATGTTGGTTGTGATGGACGGCGTCGCCACCGCTAGTGGCGACGGTGGGTCTT
CTGGGTCTTCTTCCGCTGGCGCTAAAAGGCCTAGAGTTCTGATTCCATCACAGAGTACTGCCGCCGCCGCCGCCGCCTCCGCCTCTCACGCCTCCACCTCCAATGCCACC
ACTCCCCGGAGCTTCGAAACAAGTTCTAACCATCAAGATGCAAGCTTCAAGAAGTCGTTACCGGGGCAAGTTCGAGCACCGGCCGTGTTCAGGTGCCATAGAGTGACAGC
CATTAGCAGTGGGGAAGGTGAGTTAGCTTACCAAGCAACAGTCAACATTGGTGGCCATGTCTTCAAAGGCTTTCTCTATGATCAAGGAATTGATGACAAAAATGGCTTCC
CATCTGTTTCACACCTCCATCTGGAAAGTGGTAACCACCACCACAAGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAACAGGACAATGTTGGGTCTCCGAGATGTTCTCTTTATAGCTCCCACGCCTTCTTCTCTCCATCAACAGACAACCCAAATCATTTCCTCCGATCACCACCCATCTCT
TCCTCTCCCTTCCTCCGCCGCTCTCGGCGTCAGCGTCGGCATTTTCCCCCTTCTCGCTGCAACCCCATGTCTCCCTCAGCCGCCGCCGCCGCCGCCCCCGGCCGCCGAAG
TTAGCGAGCGCAGGGGTGTGGACAATCTGAAGAGAACCCAGGATTTCGGATTCGGGAAAGGGGATTCGTTGATCGCCGGCGGGAATAATGCCCTCGACGAGCCGGTGAGA
GGCGACGCCGGCGATTCCTCCATGGGCGTGTGTAGGGACTGCGGAAACAGAGCCAAAAAGGAGTGCGATTATCGGAGGTGCAGGACGTGTTGTAAAGGGCGTGGGAATCA
TTGCTCCACGCACGTCAAGAGCACGTGGGTGTCGGCGGCTCGCCGCCGTGAGCGGCAGATGTTGGTTGTGATGGACGGCGTCGCCACCGCTAGTGGCGACGGTGGGTCTT
CTGGGTCTTCTTCCGCTGGCGCTAAAAGGCCTAGAGTTCTGATTCCATCACAGAGTACTGCCGCCGCCGCCGCCGCCTCCGCCTCTCACGCCTCCACCTCCAATGCCACC
ACTCCCCGGAGCTTCGAAACAAGTTCTAACCATCAAGATGCAAGCTTCAAGAAGTCGTTACCGGGGCAAGTTCGAGCACCGGCCGTGTTCAGGTGCCATAGAGTGACAGC
CATTAGCAGTGGGGAAGGTGAGTTAGCTTACCAAGCAACAGTCAACATTGGTGGCCATGTCTTCAAAGGCTTTCTCTATGATCAAGGAATTGATGACAAAAATGGCTTCC
CATCTGTTTCACACCTCCATCTGGAAAGTGGTAACCACCACCACAAGGAATAG
Protein sequenceShow/hide protein sequence
MNRTMLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPQPPPPPPPAAEVSERRGVDNLKRTQDFGFGKGDSLIAGGNNALDEPVR
GDAGDSSMGVCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTAAAAAASASHASTSNAT
TPRSFETSSNHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLHLESGNHHHKE