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Moc09g36310 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g36310
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionpullulanase 1, chloroplastic
Genome locationchr9:27961965..27962714
RNA-Seq ExpressionMoc09g36310
SyntenyMoc09g36310
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0051060 - pullulanase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012917.1 Pullulanase 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]1.5e-3872.09Show/hide
Query:  MSLLFSSSLHLSPSSTPAATSIRYRLIPPRTAAFSSSPPAGGLFSVSGTSQSPFPDDHILRGPLYCSSSSSMSLEESTSAHQLEDSLLYSRAFWISKYSI
        MS LFSSSLHL P S P ATS  + L PPR AA SSSP  GG+FSV+ TS S +PD H   GPLYCSSS+SMSLEEST A QLE+SLLY+RAFW+S+Y I
Subjt:  MSLLFSSSLHLSPSSTPAATSIRYRLIPPRTAAFSSSPPAGGLFSVSGTSQSPFPDDHILRGPLYCSSSSSMSLEESTSAHQLEDSLLYSRAFWISKYSI

Query:  AWNVEVGSGSCYLFASKMATLRVEDGVAK
        AWNVEVGSGSCYLF SKMATLRV DGV +
Subjt:  AWNVEVGSGSCYLFASKMATLRVEDGVAK
XP_022139216.1 pullulanase 1, chloroplastic [Momordica charantia]4.8e-61100Show/hide
Query:  MSLLFSSSLHLSPSSTPAATSIRYRLIPPRTAAFSSSPPAGGLFSVSGTSQSPFPDDHILRGPLYCSSSSSMSLEESTSAHQLEDSLLYSRAFWISKYSI
        MSLLFSSSLHLSPSSTPAATSIRYRLIPPRTAAFSSSPPAGGLFSVSGTSQSPFPDDHILRGPLYCSSSSSMSLEESTSAHQLEDSLLYSRAFWISKYSI
Subjt:  MSLLFSSSLHLSPSSTPAATSIRYRLIPPRTAAFSSSPPAGGLFSVSGTSQSPFPDDHILRGPLYCSSSSSMSLEESTSAHQLEDSLLYSRAFWISKYSI

Query:  AWNVEVGSGSCYLFASKMATLRVEDG
        AWNVEVGSGSCYLFASKMATLRVEDG
Subjt:  AWNVEVGSGSCYLFASKMATLRVEDG
XP_022966985.1 LOW QUALITY PROTEIN: pullulanase 1, chloroplastic [Cucurbita maxima]4.3e-4174.42Show/hide
Query:  MSLLFSSSLHLSPSSTPAATSIRYRLIPPRTAAFSSSPPAGGLFSVSGTSQSPFPDDHILRGPLYCSSSSSMSLEESTSAHQLEDSLLYSRAFWISKYSI
        MS LFSSSLHL P S P ATS R+ L PPR AA  SSPPAGG+FSV+ TS S +PD H   GPLYCSSS+SMS+EESTSA QLEDSLLY+RAFW+S+Y I
Subjt:  MSLLFSSSLHLSPSSTPAATSIRYRLIPPRTAAFSSSPPAGGLFSVSGTSQSPFPDDHILRGPLYCSSSSSMSLEESTSAHQLEDSLLYSRAFWISKYSI

Query:  AWNVEVGSGSCYLFASKMATLRVEDGVAK
        AWNVEVGSGSCYLF SKMATLRV+DGV +
Subjt:  AWNVEVGSGSCYLFASKMATLRVEDGVAK
XP_022968437.1 pullulanase 1, chloroplastic-like [Cucurbita maxima]6.1e-4073.64Show/hide
Query:  MSLLFSSSLHLSPSSTPAATSIRYRLIPPRTAAFSSSPPAGGLFSVSGTSQSPFPDDHILRGPLYCSSSSSMSLEESTSAHQLEDSLLYSRAFWISKYSI
        MS LFSSSLHL P S P ATS R+ L PPR AA  SSP AGG+FSV+ TS S +PD H   GPLYCSSS+SMS+EESTSA QLEDSLLY+RAFW+S+Y I
Subjt:  MSLLFSSSLHLSPSSTPAATSIRYRLIPPRTAAFSSSPPAGGLFSVSGTSQSPFPDDHILRGPLYCSSSSSMSLEESTSAHQLEDSLLYSRAFWISKYSI

Query:  AWNVEVGSGSCYLFASKMATLRVEDGVAK
        AWNVEVGSGSCYLF SKMATLRV+DGV +
Subjt:  AWNVEVGSGSCYLFASKMATLRVEDGVAK
XP_038892369.1 pullulanase 1, chloroplastic [Benincasa hispida]5.9e-4379.84Show/hide
Query:  MSLLFSSSLHLSPSSTPAATSIRYRLIPPRTAAFSSSPPAGGLFSVSGTSQSPFPDDHILRGPLYCSSSSSMSLEESTSAHQLEDSLLYSRAFWISKYSI
        MSLLFSSSLHL PSSTP ATSI Y+   PR AAFSSSPPAGG FSVS TS S F DD+   G LYCSSSSSMSLEESTS  QLEDSLLYSRAFW+S+Y I
Subjt:  MSLLFSSSLHLSPSSTPAATSIRYRLIPPRTAAFSSSPPAGGLFSVSGTSQSPFPDDHILRGPLYCSSSSSMSLEESTSAHQLEDSLLYSRAFWISKYSI

Query:  AWNVEVGSGSCYLFASKMATLRVEDGVAK
        AWNVEVGSGSCYLFASKMATLR+EDGV +
Subjt:  AWNVEVGSGSCYLFASKMATLRVEDGVAK
TrEMBL top hitse value%identityAlignment
A0A5A7SZ60 Pullulanase 13.4e-3671.32Show/hide
Query:  MSLLFSSSLHLSPSSTPAATSIRYRLIPPRTAAFSSSPPAGGLFSVSGTSQSPFPDDHILRGPLYCSSSSSMSLEESTSAHQLEDSLLYSRAFWISKYSI
        MSLLFSSSLH  P S  + TS+RY+L  PR AA SSSPPA GLFS +GTS S     +   GPLYCS SSSMSLEESTS  QLEDSLLYSRAFW+S++ I
Subjt:  MSLLFSSSLHLSPSSTPAATSIRYRLIPPRTAAFSSSPPAGGLFSVSGTSQSPFPDDHILRGPLYCSSSSSMSLEESTSAHQLEDSLLYSRAFWISKYSI

Query:  AWNVEVGSGSCYLFASKMATLRVEDGVAK
        AWNVEV SGSCYLFASKMATLRV+DGV +
Subjt:  AWNVEVGSGSCYLFASKMATLRVEDGVAK
A0A6J1CC10 pullulanase 1, chloroplastic2.3e-61100Show/hide
Query:  MSLLFSSSLHLSPSSTPAATSIRYRLIPPRTAAFSSSPPAGGLFSVSGTSQSPFPDDHILRGPLYCSSSSSMSLEESTSAHQLEDSLLYSRAFWISKYSI
        MSLLFSSSLHLSPSSTPAATSIRYRLIPPRTAAFSSSPPAGGLFSVSGTSQSPFPDDHILRGPLYCSSSSSMSLEESTSAHQLEDSLLYSRAFWISKYSI
Subjt:  MSLLFSSSLHLSPSSTPAATSIRYRLIPPRTAAFSSSPPAGGLFSVSGTSQSPFPDDHILRGPLYCSSSSSMSLEESTSAHQLEDSLLYSRAFWISKYSI

Query:  AWNVEVGSGSCYLFASKMATLRVEDG
        AWNVEVGSGSCYLFASKMATLRVEDG
Subjt:  AWNVEVGSGSCYLFASKMATLRVEDG
A0A6J1G1P3 pullulanase 1, chloroplastic1.2e-3872.09Show/hide
Query:  MSLLFSSSLHLSPSSTPAATSIRYRLIPPRTAAFSSSPPAGGLFSVSGTSQSPFPDDHILRGPLYCSSSSSMSLEESTSAHQLEDSLLYSRAFWISKYSI
        MS LFSSSLHL P S P ATS  + L PPR AA SSSP  GG+FSV+ TS S +P  H   GPLYCSSS+SMSLEEST A QLEDSLLY+RAFW+S+Y I
Subjt:  MSLLFSSSLHLSPSSTPAATSIRYRLIPPRTAAFSSSPPAGGLFSVSGTSQSPFPDDHILRGPLYCSSSSSMSLEESTSAHQLEDSLLYSRAFWISKYSI

Query:  AWNVEVGSGSCYLFASKMATLRVEDGVAK
        AWNVEVGSGSCYLF SKMATLRV DGV +
Subjt:  AWNVEVGSGSCYLFASKMATLRVEDGVAK
A0A6J1HT34 LOW QUALITY PROTEIN: pullulanase 1, chloroplastic2.1e-4174.42Show/hide
Query:  MSLLFSSSLHLSPSSTPAATSIRYRLIPPRTAAFSSSPPAGGLFSVSGTSQSPFPDDHILRGPLYCSSSSSMSLEESTSAHQLEDSLLYSRAFWISKYSI
        MS LFSSSLHL P S P ATS R+ L PPR AA  SSPPAGG+FSV+ TS S +PD H   GPLYCSSS+SMS+EESTSA QLEDSLLY+RAFW+S+Y I
Subjt:  MSLLFSSSLHLSPSSTPAATSIRYRLIPPRTAAFSSSPPAGGLFSVSGTSQSPFPDDHILRGPLYCSSSSSMSLEESTSAHQLEDSLLYSRAFWISKYSI

Query:  AWNVEVGSGSCYLFASKMATLRVEDGVAK
        AWNVEVGSGSCYLF SKMATLRV+DGV +
Subjt:  AWNVEVGSGSCYLFASKMATLRVEDGVAK
A0A6J1HTH9 pullulanase 1, chloroplastic-like3.0e-4073.64Show/hide
Query:  MSLLFSSSLHLSPSSTPAATSIRYRLIPPRTAAFSSSPPAGGLFSVSGTSQSPFPDDHILRGPLYCSSSSSMSLEESTSAHQLEDSLLYSRAFWISKYSI
        MS LFSSSLHL P S P ATS R+ L PPR AA  SSP AGG+FSV+ TS S +PD H   GPLYCSSS+SMS+EESTSA QLEDSLLY+RAFW+S+Y I
Subjt:  MSLLFSSSLHLSPSSTPAATSIRYRLIPPRTAAFSSSPPAGGLFSVSGTSQSPFPDDHILRGPLYCSSSSSMSLEESTSAHQLEDSLLYSRAFWISKYSI

Query:  AWNVEVGSGSCYLFASKMATLRVEDGVAK
        AWNVEVGSGSCYLF SKMATLRV+DGV +
Subjt:  AWNVEVGSGSCYLFASKMATLRVEDGVAK
SwissProt top hitse value%identityAlignment
Q8GTR4 Pullulanase 1, chloroplastic1.1e-1056.45Show/hide
Query:  SSSSSMSLEESTSAHQLEDSLLYSRAFWISKYSIAWNVEVGSGSCYLFASKMATLRV-EDGV
        S+SS MSLE S+   Q  D L+YSRA+W+++  IAWNV+VG GSCY +ASK A L   EDG+
Subjt:  SSSSSMSLEESTSAHQLEDSLLYSRAFWISKYSIAWNVEVGSGSCYLFASKMATLRV-EDGV
Arabidopsis top hitse value%identityAlignment
AT5G04360.1 limit dextrinase7.5e-1256.45Show/hide
Query:  SSSSSMSLEESTSAHQLEDSLLYSRAFWISKYSIAWNVEVGSGSCYLFASKMATLRV-EDGV
        S+SS MSLE S+   Q  D L+YSRA+W+++  IAWNV+VG GSCY +ASK A L   EDG+
Subjt:  SSSSSMSLEESTSAHQLEDSLLYSRAFWISKYSIAWNVEVGSGSCYLFASKMATLRV-EDGV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCTTCTGTTTTCCTCTTCCCTCCATCTCTCACCTTCGTCAACTCCGGCTGCAACTTCCATCCGTTACCGTCTTATTCCTCCCCGCACCGCCGCCTTCTCATCGTC
TCCGCCGGCCGGCGGTCTCTTCTCCGTTTCCGGAACTTCTCAGTCTCCTTTCCCGGACGACCACATTCTCCGTGGACCTCTTTACTGCTCCTCCTCCTCATCTATGTCGC
TCGAGGAATCTACTTCAGCTCACCAGTTGGAAGATAGCTTGTTGTACTCGAGAGCTTTTTGGATTAGCAAATATAGTATAGCGTGGAATGTGGAAGTTGGAAGCGGTTCG
TGTTATCTATTCGCCAGTAAAATGGCAACTCTGCGTGTTGAAGATGGTGTAGCGAAGGCTACGATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCTTCTGTTTTCCTCTTCCCTCCATCTCTCACCTTCGTCAACTCCGGCTGCAACTTCCATCCGTTACCGTCTTATTCCTCCCCGCACCGCCGCCTTCTCATCGTC
TCCGCCGGCCGGCGGTCTCTTCTCCGTTTCCGGAACTTCTCAGTCTCCTTTCCCGGACGACCACATTCTCCGTGGACCTCTTTACTGCTCCTCCTCCTCATCTATGTCGC
TCGAGGAATCTACTTCAGCTCACCAGTTGGAAGATAGCTTGTTGTACTCGAGAGCTTTTTGGATTAGCAAATATAGTATAGCGTGGAATGTGGAAGTTGGAAGCGGTTCG
TGTTATCTATTCGCCAGTAAAATGGCAACTCTGCGTGTTGAAGATGGTGTAGCGAAGGCTACGATGTGA
Protein sequenceShow/hide protein sequence
MSLLFSSSLHLSPSSTPAATSIRYRLIPPRTAAFSSSPPAGGLFSVSGTSQSPFPDDHILRGPLYCSSSSSMSLEESTSAHQLEDSLLYSRAFWISKYSIAWNVEVGSGS
CYLFASKMATLRVEDGVAKATM