; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g36650 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g36650
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRAB6-interacting golgin
Genome locationchr9:28270981..28272539
RNA-Seq ExpressionMoc09g36650
SyntenyMoc09g36650
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
InterPro domainsIPR007033 - RAB6-interacting golgin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034665.1 uncharacterized protein E6C27_scaffold65G006840 [Cucumis melo var. makuwa]1.5e-5680.75Show/hide
Query:  MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELKVMVDPMRKEVGNVRKRIDTVKREL
        MTS +GG  NG+R  +EGS+D+ EDE VSKLTVSTLQAREEEI+RKKMEV+EKVE QL+RAEEEAKRLAQIWEEL+VM DPM KEVGNVRKRIDTVKREL
Subjt:  MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELKVMVDPMRKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH
        KSLGQICQKKEKEYKE  +IFNEKSNEKAQLLA LME    SE+WRM+KLEEL+KNIEST+
Subjt:  KSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH

XP_004150485.1 uncharacterized protein LOC101217540 [Cucumis sativus]2.5e-5983.65Show/hide
Query:  MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELKVMVDPMRKEVGNVRKRIDTVKREL
        MTS +GG  N +R  +EGS+D+ EDE VSKLTVSTLQAREEEI+RKKMEV+EKVELQL+RAEEEAKRLAQIWEEL+VM DPM KEVGNVRKRIDTVKREL
Subjt:  MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELKVMVDPMRKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIES
        KSLGQICQKKEKEYKE  +IFNEKSNEKAQLLA LMELLGQSE+WRM+KLEEL+KNIES
Subjt:  KSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIES

XP_008446775.1 PREDICTED: uncharacterized protein LOC103489402 [Cucumis melo]1.7e-6083.23Show/hide
Query:  MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELKVMVDPMRKEVGNVRKRIDTVKREL
        MTS +GG  NG+R  +EGS+D+ EDE VSKLTVSTLQAREEEI+RKKMEV+EKVE QL+RAEEEAKRLAQIWEEL+VM DPM KEVGNVRKRIDTVKREL
Subjt:  MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELKVMVDPMRKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH
        KSLGQICQKKEKEYKE  +IFNEKSNEKAQLLA LMELLGQSE+WRM+KLEEL+KNIEST+
Subjt:  KSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH

XP_022150510.1 uncharacterized protein LOC111018644 [Momordica charantia]5.5e-75100Show/hide
Query:  MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELKVMVDPMRKEVGNVRKRIDTVKREL
        MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELKVMVDPMRKEVGNVRKRIDTVKREL
Subjt:  MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELKVMVDPMRKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH
        KSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH
Subjt:  KSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH

XP_038892385.1 uncharacterized protein LOC120081508 [Benincasa hispida]3.1e-5480.52Show/hide
Query:  SRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELKVMVDPMRKEVGNVRKRIDTVKRELKSLGQIC
        S+NG      G +D+ EDEM+SKLT+STLQAREEEI++KKMEV+EKVE QL+RAEEEAKRLAQIWEEL+VM DPM KEVGNVRKRIDTVKRELKSLGQIC
Subjt:  SRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELKVMVDPMRKEVGNVRKRIDTVKRELKSLGQIC

Query:  QKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH
        QKKEKE KE  +IFNEKSNEKAQLLA LMELLGQSE+WRM+KLEEL+KNIEST+
Subjt:  QKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH

TrEMBL top hitse value%identityAlignment
A0A0A0KTG1 RAB6-interacting golgin1.2e-5983.65Show/hide
Query:  MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELKVMVDPMRKEVGNVRKRIDTVKREL
        MTS +GG  N +R  +EGS+D+ EDE VSKLTVSTLQAREEEI+RKKMEV+EKVELQL+RAEEEAKRLAQIWEEL+VM DPM KEVGNVRKRIDTVKREL
Subjt:  MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELKVMVDPMRKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIES
        KSLGQICQKKEKEYKE  +IFNEKSNEKAQLLA LMELLGQSE+WRM+KLEEL+KNIES
Subjt:  KSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIES

A0A1S3BFW5 RAB6-interacting golgin8.3e-6183.23Show/hide
Query:  MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELKVMVDPMRKEVGNVRKRIDTVKREL
        MTS +GG  NG+R  +EGS+D+ EDE VSKLTVSTLQAREEEI+RKKMEV+EKVE QL+RAEEEAKRLAQIWEEL+VM DPM KEVGNVRKRIDTVKREL
Subjt:  MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELKVMVDPMRKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH
        KSLGQICQKKEKEYKE  +IFNEKSNEKAQLLA LMELLGQSE+WRM+KLEEL+KNIEST+
Subjt:  KSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH

A0A5D3CFS0 RAB6-interacting golgin7.3e-5780.75Show/hide
Query:  MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELKVMVDPMRKEVGNVRKRIDTVKREL
        MTS +GG  NG+R  +EGS+D+ EDE VSKLTVSTLQAREEEI+RKKMEV+EKVE QL+RAEEEAKRLAQIWEEL+VM DPM KEVGNVRKRIDTVKREL
Subjt:  MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELKVMVDPMRKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH
        KSLGQICQKKEKEYKE  +IFNEKSNEKAQLLA LME    SE+WRM+KLEEL+KNIEST+
Subjt:  KSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH

A0A6J1D8N9 RAB6-interacting golgin2.7e-75100Show/hide
Query:  MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELKVMVDPMRKEVGNVRKRIDTVKREL
        MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELKVMVDPMRKEVGNVRKRIDTVKREL
Subjt:  MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELKVMVDPMRKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH
        KSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH
Subjt:  KSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH

A0A6J1HV92 RAB6-interacting golgin1.3e-5378.4Show/hide
Query:  MTSNDGGSRNGERTSIEGSDDQEED-EMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELKVMVDPMRKEVGNVRKRIDTVKRE
        MTS  G   NGER   EGS  ++ED EM  +LTVSTLQAREEEI+R+KMEV+EKVELQLSRAEEEAKRLAQIWEEL+VM DPM KEVGNVRKRIDT K+E
Subjt:  MTSNDGGSRNGERTSIEGSDDQEED-EMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELKVMVDPMRKEVGNVRKRIDTVKRE

Query:  LKSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH
        LKSLGQICQKKEKEYKE LEIFNEK+NEKAQLL  LMELL QSERWRM KLEEL+K+I  T+
Subjt:  LKSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G36410.2 Family of unknown function (DUF662)3.5e-3558.09Show/hide
Query:  EDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELKVMVDPMRKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKETLEIFNE
        EDE +++  +S  +A+E+EI++++MEVRE+++ QL R E+E KRL+ I EEL+ M DPMRKEV  VRK+ID+V +ELK LG   QKKE+EYKE L+ FNE
Subjt:  EDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELKVMVDPMRKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKETLEIFNE

Query:  KSNEKAQLLAALMELLGQSERWRMEKLEELSKNIES
        K+ EK QL+  LMEL+G+SE+ RM KLEELSK+IE+
Subjt:  KSNEKAQLLAALMELLGQSERWRMEKLEELSKNIES

AT2G36410.3 Family of unknown function (DUF662)5.0e-3457.35Show/hide
Query:  EDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELKVMVDPMRKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKETLEIFNE
        EDE +++  +S  +A+E+EI++++MEVRE+++ QL R E+E KRL+ I EEL+ M DPMRKEV  VRK+ID+V +ELK LG   QKK  EYKE L+ FNE
Subjt:  EDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELKVMVDPMRKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKETLEIFNE

Query:  KSNEKAQLLAALMELLGQSERWRMEKLEELSKNIES
        K+ EK QL+  LMEL+G+SE+ RM KLEELSK+IE+
Subjt:  KSNEKAQLLAALMELLGQSERWRMEKLEELSKNIES

AT3G09980.1 Family of unknown function (DUF662)5.2e-3961.54Show/hide
Query:  SDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELKVMVDPMRKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKETL
        S   +EDE +S+  +S  +A+EEEI++KKME+RE+V+ QL R EEE KRLA I EEL+ + DPMRKEV  VRK+ID+V +ELK LG   QKKE+EYKE L
Subjt:  SDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELKVMVDPMRKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKETL

Query:  EIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH
        E FNEK+ EK QL+  LMEL+G+SE+ RM+KLEELSKNI+S H
Subjt:  EIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH

AT3G52920.2 Family of unknown function (DUF662)5.9e-3556.03Show/hide
Query:  SDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELKVMVDPMRKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKETL
        S   +EDE +++  +S  +A+E+EI+++KMEVRE+V+ QL R EEE +RLA I EEL+ M DPMRKEV  VRK+ID+V +ELK LG   QKKE+EYKE L
Subjt:  SDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELKVMVDPMRKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKETL

Query:  EIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIES
        + FNEK+ EK QL+  LMEL+G+SE+ R++KL+ELS++I++
Subjt:  EIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIES

AT5G03660.1 Family of unknown function (DUF662)5.0e-3456.34Show/hide
Query:  SDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELKVMVDPMRKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKETL
        S  ++ED+ +S   +S  +A+EEEI++KKME+RE+V+ QL R E+E+KRLA I EEL+   DPMRKEV  VRK+ID++ +ELK LG   QKKE EYK+ L
Subjt:  SDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELKVMVDPMRKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKETL

Query:  EIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIEST
        E FNEK+ EK +L+  L EL G+SE++R +KLEELSKNI+ T
Subjt:  EIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIEST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAGTAACGATGGTGGCAGCAGAAATGGCGAGAGAACTTCAATAGAAGGGAGTGACGATCAAGAGGAAGACGAGATGGTGTCGAAACTGACCGTATCTACATTACA
AGCTAGAGAAGAAGAGATCGATAGGAAGAAGATGGAAGTAAGAGAGAAGGTTGAACTTCAATTAAGCCGTGCCGAGGAAGAAGCGAAGCGCTTAGCACAGATTTGGGAAG
AGCTGAAGGTAATGGTAGACCCAATGAGGAAGGAAGTTGGCAACGTGCGAAAAAGAATAGACACAGTCAAGAGAGAACTGAAATCACTGGGACAGATATGCCAAAAGAAG
GAAAAAGAATATAAAGAAACCCTGGAAATATTCAATGAGAAAAGCAACGAGAAAGCTCAGCTACTCGCTGCACTAATGGAGCTGCTGGGTCAGAGTGAGAGATGGAGGAT
GGAAAAGCTCGAGGAATTGAGTAAGAACATAGAGTCAACGCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAAGTAACGATGGTGGCAGCAGAAATGGCGAGAGAACTTCAATAGAAGGGAGTGACGATCAAGAGGAAGACGAGATGGTGTCGAAACTGACCGTATCTACATTACA
AGCTAGAGAAGAAGAGATCGATAGGAAGAAGATGGAAGTAAGAGAGAAGGTTGAACTTCAATTAAGCCGTGCCGAGGAAGAAGCGAAGCGCTTAGCACAGATTTGGGAAG
AGCTGAAGGTAATGGTAGACCCAATGAGGAAGGAAGTTGGCAACGTGCGAAAAAGAATAGACACAGTCAAGAGAGAACTGAAATCACTGGGACAGATATGCCAAAAGAAG
GAAAAAGAATATAAAGAAACCCTGGAAATATTCAATGAGAAAAGCAACGAGAAAGCTCAGCTACTCGCTGCACTAATGGAGCTGCTGGGTCAGAGTGAGAGATGGAGGAT
GGAAAAGCTCGAGGAATTGAGTAAGAACATAGAGTCAACGCACTGA
Protein sequenceShow/hide protein sequence
MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELKVMVDPMRKEVGNVRKRIDTVKRELKSLGQICQKK
EKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH