CuGenDBv2

Gene ID	Moc09g39370
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ran guanine nucleotide release factor
Genome location	chr9:30166031..30168523
RNA-Seq Expression	Moc09g39370
Synteny	Moc09g39370
Gene Ontology terms	GO:0006606 - protein import into nucleus (biological process) GO:0050790 - regulation of catalytic activity (biological process) GO:0005634 - nucleus (cellular component) GO:0005085 - guanyl-nucleotide exchange factor activity (molecular function) GO:0031267 - small GTPase binding (molecular function)
InterPro domains	IPR007681 - Ran-interacting Mog1 protein IPR016123 - Mog1/PsbP, alpha/beta/alpha sandwich

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6601426.1 putative ran guanine nucleotide release factor, partial [Cucurbita argyrosperma subsp. sororia]

2.2e-34

92.05

Show/hide

Query:  AISKGRQGREAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVCSGLATPASQIGCMPMPEVFKLAVSSFKVNDRSLFGA
        AISKGRQGREAQNIVRVYLANLRLK VGTDVLICAYEPILINPLSESASSV SGLATPASQ GCMPMPEVFKLA+SSFKV D S+FGA
Subjt:  AISKGRQGREAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVCSGLATPASQIGCMPMPEVFKLAVSSFKVNDRSLFGA

KAG7032209.1 putative ran guanine nucleotide release factor, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.2e-34

92.05

Show/hide

Query:  AISKGRQGREAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVCSGLATPASQIGCMPMPEVFKLAVSSFKVNDRSLFGA
        AISKGRQGREAQNIVRVYLANLRLK VGTDVLICAYEPILINPLSESASSV SGLATPASQ GCMPMPEVFKLA+SSFKV D S+FGA
Subjt:  AISKGRQGREAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVCSGLATPASQIGCMPMPEVFKLAVSSFKVNDRSLFGA

XP_022151170.1 probable ran guanine nucleotide release factor [Momordica charantia]

3.2e-41

81.58

Show/hide

Query:  GAYSSAGHCATLVLHSSEPRIFPHAISKGRQGREAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVCSGLATPASQIGCMPMPEVFKLAVS
        G   + G C   +       +   AISKGRQGREAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVCSGLATPASQIGCMPMPEVFKLAVS
Subjt:  GAYSSAGHCATLVLHSSEPRIFPHAISKGRQGREAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVCSGLATPASQIGCMPMPEVFKLAVS

Query:  SFKVNDRSLFGAPA
        SFKVNDRSLFGAPA
Subjt:  SFKVNDRSLFGAPA

XP_022987588.1 probable ran guanine nucleotide release factor [Cucurbita maxima]

5.0e-34

74.11

Show/hide

Query:  GAYSSAGHCATLVLHSSEPRIFPHAISKGRQGREAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVCSGLATPASQIGCMPMPEVFKLAVS
        G   + G C   +       +   AISKGRQGREAQNIVRVYLANLRLK VGTDVLICAYEPILINPLSESASSV SGLATPASQ GC+PMPEVFKLA+S
Subjt:  GAYSSAGHCATLVLHSSEPRIFPHAISKGRQGREAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVCSGLATPASQIGCMPMPEVFKLAVS

Query:  SFKVNDRSLFGA
        SFKV D S+FGA
Subjt:  SFKVNDRSLFGA

XP_023552843.1 probable ran guanine nucleotide release factor [Cucurbita pepo subsp. pepo]

1.3e-34

Show/hide

Query:  GAYSSAGHCATLVLHSSEPRIFPHAISKGRQGREAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVCSGLATPASQIGCMPMPEVFKLAVS
        G   + G C   +       +   AISKGRQGREAQNIVRVYLANLRLK VGTDVLICAYEPILINPLSESASSV SGLATPASQ GCMPMPEVFKLA+S
Subjt:  GAYSSAGHCATLVLHSSEPRIFPHAISKGRQGREAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVCSGLATPASQIGCMPMPEVFKLAVS

Query:  SFKVNDRSLFGA
        SFKV D S+FGA
Subjt:  SFKVNDRSLFGA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KU01 Uncharacterized protein

5.4e-34

91.11

Show/hide

Query:  AISKGRQGREAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVCSGLATPASQIGCMPMPEVFKLAVSSFKVNDRSLFGAPA
        AISKGRQGREAQNIVRVYLANLRLKGVGTDVLI AYEPI+INPLSESASSV SGLATPAS  G MPMPEVFKLAVSSFKV D SLFGAPA
Subjt:  AISKGRQGREAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVCSGLATPASQIGCMPMPEVFKLAVSSFKVNDRSLFGAPA

A0A1S3BEU3 probable ran guanine nucleotide release factor

3.5e-33

72.81

Show/hide

Query:  GAYSSAGHCATLVLHSSEPRIFPHAISKGRQGREAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVCSGLATPASQIGCMPMPEVFKLAVS
        G   + G C   +   +   +   AISKGRQGREAQNIVRVYLANLRLKGVGTDVLI AYEPI+INPLSESASSV SGL TPAS  G +PMPEVFKLAVS
Subjt:  GAYSSAGHCATLVLHSSEPRIFPHAISKGRQGREAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVCSGLATPASQIGCMPMPEVFKLAVS

Query:  SFKVNDRSLFGAPA
        SFKV D SLFGAPA
Subjt:  SFKVNDRSLFGAPA

A0A6J1DAG6 probable ran guanine nucleotide release factor

1.6e-41

81.58

Show/hide

Query:  GAYSSAGHCATLVLHSSEPRIFPHAISKGRQGREAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVCSGLATPASQIGCMPMPEVFKLAVS
        G   + G C   +       +   AISKGRQGREAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVCSGLATPASQIGCMPMPEVFKLAVS
Subjt:  GAYSSAGHCATLVLHSSEPRIFPHAISKGRQGREAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVCSGLATPASQIGCMPMPEVFKLAVS

Query:  SFKVNDRSLFGAPA
        SFKVNDRSLFGAPA
Subjt:  SFKVNDRSLFGAPA

A0A6J1GZ86 probable ran guanine nucleotide release factor

3.2e-34

90.91

Show/hide

Query:  AISKGRQGREAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVCSGLATPASQIGCMPMPEVFKLAVSSFKVNDRSLFGA
        AISKGRQGREAQNIVRVYLANLRLK VGTDVLICAYEPILINPLSESASSV SGL TPASQ GCMPMPEVFKLA+SSFKV D S+FGA
Subjt:  AISKGRQGREAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVCSGLATPASQIGCMPMPEVFKLAVSSFKVNDRSLFGA

A0A6J1JJW2 probable ran guanine nucleotide release factor

2.4e-34

74.11

Show/hide

Query:  GAYSSAGHCATLVLHSSEPRIFPHAISKGRQGREAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVCSGLATPASQIGCMPMPEVFKLAVS
        G   + G C   +       +   AISKGRQGREAQNIVRVYLANLRLK VGTDVLICAYEPILINPLSESASSV SGLATPASQ GC+PMPEVFKLA+S
Subjt:  GAYSSAGHCATLVLHSSEPRIFPHAISKGRQGREAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVCSGLATPASQIGCMPMPEVFKLAVS

Query:  SFKVNDRSLFGA
        SFKV D S+FGA
Subjt:  SFKVNDRSLFGA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G69680.1 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein

9.4e-31

73.33

Show/hide

Query:  AISKGRQGREAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVCSGLATPASQIGCMPMPEVFKLAVSSFKVNDRSLFGAPA
        AISKGRQGREAQN+VRVY+AN+RLKGV TDVL+ AYEPILINPLSESA +V SGLA PASQ G MPM ++ K ++S+FKVND +LFG+ A
Subjt:  AISKGRQGREAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVCSGLATPASQIGCMPMPEVFKLAVSSFKVNDRSLFGAPA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCCGTACCTTTCCGCCGCCACCCACCTCTGTTGTGCCAATATTTTTTTTGGTGCTTACTCGTCCGCCGGCCACTGTGCAACTCTAGTGCTACACTCGTCGGAA
CCTCGTATCTTCCCTCATGCAATTTCAAAGGGCCGGCAAGGAAGAGAAGCCCAAAATATTGTCCGGGTTTATTTGGCGAATCTACGTCTTAAAGGAGTTGGTACA
GATGTGCTAATCTGTGCATATGAACCCATTCTTATAAATCCTTTGAGCGAAAGTGCTAGCTCAGTTTGCTCTGGTTTGGCCACTCCTGCTTCACAAATCGGATGC
ATGCCAATGCCTGAGGTATTCAAACTTGCAGTCTCCAGCTTTAAAGTCAATGACCGGAGCCTCTTCGGCGCGCCTGCCTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MPYLSAATHLCCANIFFGAYSSAGHCATLVLHSSEPRIFPHAISKGRQGREAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVCSGLATPASQIGC
MPMPEVFKLAVSSFKVNDRSLFGAPA

Moc09g39370 (gene) of Bitter gourd (OHB3-1) v2 genome