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Moc09g39710 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g39710
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Genome locationchr9:30420126..30420446
RNA-Seq ExpressionMoc09g39710
SyntenyMoc09g39710
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]2.3e-0536.7Show/hide
Query:  SCR-SKTGFGLLLRDSN---GAISTVNVLFLLISDISILCMLEILALFEGIWLARTIPCSRLLVESDSLLATNLINGSLHSIGDESSWIRDIQQFLTALS
        +CR + T FG ++RDS+    A +++ V F L        + EI  + EG+  A     + L VESDSLLA  LI   +H+ GDE +W+ +IQ      +
Subjt:  SCR-SKTGFGLLLRDSN---GAISTVNVLFLLISDISILCMLEILALFEGIWLARTIPCSRLLVESDSLLATNLINGSLHSIGDESSWIRDIQQFLTALS

Query:  HISFQHIPR
         ISF H  R
Subjt:  HISFQHIPR
XP_022158489.1 uncharacterized protein LOC111024968 [Momordica charantia]4.4e-0437Show/hide
Query:  TGFGLLLRDSNGAISTVNVLFLLISDISILCMLEILALFEGIWLARTIPCSRLLVESDSLLATNLINGSLHSIGDESSWIRDIQQFLTALSHISFQHIPR
        +G G+LLR+ N  I    V F +   +    + +ILA+ EG+ LA  +   R++VE+DSL A NLI       G+  SW+ DI+ F      I FQH+ R
Subjt:  TGFGLLLRDSNGAISTVNVLFLLISDISILCMLEILALFEGIWLARTIPCSRLLVESDSLLATNLINGSLHSIGDESSWIRDIQQFLTALSHISFQHIPR
TrEMBL top hitse value%identityAlignment
A0A6J1DX30 uncharacterized protein LOC1110248741.1e-0536.7Show/hide
Query:  SCR-SKTGFGLLLRDSN---GAISTVNVLFLLISDISILCMLEILALFEGIWLARTIPCSRLLVESDSLLATNLINGSLHSIGDESSWIRDIQQFLTALS
        +CR + T FG ++RDS+    A +++ V F L        + EI  + EG+  A     + L VESDSLLA  LI   +H+ GDE +W+ +IQ      +
Subjt:  SCR-SKTGFGLLLRDSN---GAISTVNVLFLLISDISILCMLEILALFEGIWLARTIPCSRLLVESDSLLATNLINGSLHSIGDESSWIRDIQQFLTALS

Query:  HISFQHIPR
         ISF H  R
Subjt:  HISFQHIPR
A0A6J1DZK3 uncharacterized protein LOC1110249682.1e-0437Show/hide
Query:  TGFGLLLRDSNGAISTVNVLFLLISDISILCMLEILALFEGIWLARTIPCSRLLVESDSLLATNLINGSLHSIGDESSWIRDIQQFLTALSHISFQHIPR
        +G G+LLR+ N  I    V F +   +    + +ILA+ EG+ LA  +   R++VE+DSL A NLI       G+  SW+ DI+ F      I FQH+ R
Subjt:  TGFGLLLRDSNGAISTVNVLFLLISDISILCMLEILALFEGIWLARTIPCSRLLVESDSLLATNLINGSLHSIGDESSWIRDIQQFLTALSHISFQHIPR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTGCCGTTCAAAAACAGGTTTCGGCCTTCTTCTTAGGGATTCAAATGGAGCAATCTCGACAGTAAATGTGTTGTTTCTGCTGATTTCTGATATCTCAATCCTTTG
CATGTTAGAAATCTTGGCTCTCTTTGAAGGTATTTGGTTAGCTCGAACCATTCCATGTTCTCGGTTATTGGTTGAATCTGATTCTCTTTTGGCAACAAATCTCATCAATG
GGAGTCTTCATTCAATTGGGGATGAAAGTTCTTGGATTCGTGACATTCAACAATTTCTAACAGCTTTGAGTCATATATCTTTTCAGCACATCCCTCGATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTGCCGTTCAAAAACAGGTTTCGGCCTTCTTCTTAGGGATTCAAATGGAGCAATCTCGACAGTAAATGTGTTGTTTCTGCTGATTTCTGATATCTCAATCCTTTG
CATGTTAGAAATCTTGGCTCTCTTTGAAGGTATTTGGTTAGCTCGAACCATTCCATGTTCTCGGTTATTGGTTGAATCTGATTCTCTTTTGGCAACAAATCTCATCAATG
GGAGTCTTCATTCAATTGGGGATGAAAGTTCTTGGATTCGTGACATTCAACAATTTCTAACAGCTTTGAGTCATATATCTTTTCAGCACATCCCTCGATAA
Protein sequenceShow/hide protein sequence
MSCRSKTGFGLLLRDSNGAISTVNVLFLLISDISILCMLEILALFEGIWLARTIPCSRLLVESDSLLATNLINGSLHSIGDESSWIRDIQQFLTALSHISFQHIPR