CuGenDBv2

Gene ID	Moc09g40950
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ribosomal protein S21 family protein isoform 1
Genome location	chr9:31243493..31244143
RNA-Seq Expression	Moc09g40950
Synteny	Moc09g40950
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001911 - Ribosomal protein S21

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6573697.1 hypothetical protein SDJN03_27584, partial [Cucurbita argyrosperma subsp. sororia]

4.9e-39

86.24

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Query:  MNSLARNVSCFIRPSIHTTDSIHFLQNLHCQQQQWRGIRVKVLNGNLERALKFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK
        MNSLARN+SC IR SIH T S      LHC QQQWRGIRVKVLNGNLERA+ FLQRKM+SSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK
Subjt:  MNSLARNVSCFIRPSIHTTDSIHFLQNLHCQQQQWRGIRVKVLNGNLERALKFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK

Query:  LKAILIKKV
        LKAILIKKV
Subjt:  LKAILIKKV

KAG6581566.1 Cycloartenol-C-24-methyltransferase, partial [Cucurbita argyrosperma subsp. sororia]

2.6e-40

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Query:  MNSLARNVSCFIRPSIHTTDSIHFLQNLHCQQQQWRGIRVKVLNGNLERALKFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK
        MNSL+RN+SC IR S+HT    + LQ+LH QQQQWRGIRVKVLNGNLERAL FLQRKM+SSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK
Subjt:  MNSLARNVSCFIRPSIHTTDSIHFLQNLHCQQQQWRGIRVKVLNGNLERALKFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK

Query:  LKAILIKKVSDFSALEVCKEHQSWNITLYNQTQQVSAYRTVKKSVFLPKA
        LKAILIKKV    A   C  + ++  ++++    ++A        F  +A
Subjt:  LKAILIKKVSDFSALEVCKEHQSWNITLYNQTQQVSAYRTVKKSVFLPKA

KAG7012773.1 hypothetical protein SDJN02_25526, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.9e-39

86.24

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Query:  MNSLARNVSCFIRPSIHTTDSIHFLQNLHCQQQQWRGIRVKVLNGNLERALKFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK
        MNSLARN+SC IR SIH T S      LHC QQQWRGIRVKVLNGNLERA+ FLQRKM+SSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK
Subjt:  MNSLARNVSCFIRPSIHTTDSIHFLQNLHCQQQQWRGIRVKVLNGNLERALKFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK

Query:  LKAILIKKV
        LKAILIKKV
Subjt:  LKAILIKKV

XP_022151802.1 uncharacterized protein LOC111019699 [Momordica charantia]

2.1e-50

100

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Query:  MNSLARNVSCFIRPSIHTTDSIHFLQNLHCQQQQWRGIRVKVLNGNLERALKFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK
        MNSLARNVSCFIRPSIHTTDSIHFLQNLHCQQQQWRGIRVKVLNGNLERALKFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK
Subjt:  MNSLARNVSCFIRPSIHTTDSIHFLQNLHCQQQQWRGIRVKVLNGNLERALKFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK

Query:  LKAILIKKV
        LKAILIKKV
Subjt:  LKAILIKKV

XP_022966846.1 uncharacterized protein LOC111466431 [Cucurbita maxima]

1.7e-39

87.16

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Query:  MNSLARNVSCFIRPSIHTTDSIHFLQNLHCQQQQWRGIRVKVLNGNLERALKFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK
        MNSLARN+SC IR SIH T S      LHC QQQWRGIRVKVLNGNLERA+ FLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK
Subjt:  MNSLARNVSCFIRPSIHTTDSIHFLQNLHCQQQQWRGIRVKVLNGNLERALKFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK

Query:  LKAILIKKV
        LKAILIKKV
Subjt:  LKAILIKKV

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DEG8 uncharacterized protein LOC111019699

1.0e-50

100

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Query:  MNSLARNVSCFIRPSIHTTDSIHFLQNLHCQQQQWRGIRVKVLNGNLERALKFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK
        MNSLARNVSCFIRPSIHTTDSIHFLQNLHCQQQQWRGIRVKVLNGNLERALKFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK
Subjt:  MNSLARNVSCFIRPSIHTTDSIHFLQNLHCQQQQWRGIRVKVLNGNLERALKFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK

Query:  LKAILIKKV
        LKAILIKKV
Subjt:  LKAILIKKV

A0A6J1F3V2 uncharacterized protein LOC111441929

4.0e-39

86.24

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Query:  MNSLARNVSCFIRPSIHTTDSIHFLQNLHCQQQQWRGIRVKVLNGNLERALKFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK
        MNSL+RN+SC IR S+HT    + LQ+LH QQQQWRGIRVKVLNGNLERAL FLQRKM+SSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK
Subjt:  MNSLARNVSCFIRPSIHTTDSIHFLQNLHCQQQQWRGIRVKVLNGNLERALKFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK

Query:  LKAILIKKV
        LKAILIKKV
Subjt:  LKAILIKKV

A0A6J1G018 uncharacterized protein LOC111449463

2.4e-39

86.24

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Query:  MNSLARNVSCFIRPSIHTTDSIHFLQNLHCQQQQWRGIRVKVLNGNLERALKFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK
        MNSLARN+SC IR SIH T S      LHC QQQWRGIRVKVLNGNLERA+ FLQRKM+SSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK
Subjt:  MNSLARNVSCFIRPSIHTTDSIHFLQNLHCQQQQWRGIRVKVLNGNLERALKFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK

Query:  LKAILIKKV
        LKAILIKKV
Subjt:  LKAILIKKV

A0A6J1HQF3 uncharacterized protein LOC111466431

8.1e-40

87.16

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Query:  MNSLARNVSCFIRPSIHTTDSIHFLQNLHCQQQQWRGIRVKVLNGNLERALKFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK
        MNSLARN+SC IR SIH T S      LHC QQQWRGIRVKVLNGNLERA+ FLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK
Subjt:  MNSLARNVSCFIRPSIHTTDSIHFLQNLHCQQQQWRGIRVKVLNGNLERALKFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK

Query:  LKAILIKKV
        LKAILIKKV
Subjt:  LKAILIKKV

A0A6J1J5L6 uncharacterized protein LOC111481507

5.3e-39

86.24

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Query:  MNSLARNVSCFIRPSIHTTDSIHFLQNLHCQQQQWRGIRVKVLNGNLERALKFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK
        MNSL+RN+SC IR S+HT    + L++LH QQQQWRGIRVKVLNGNLERAL FLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK
Subjt:  MNSLARNVSCFIRPSIHTTDSIHFLQNLHCQQQQWRGIRVKVLNGNLERALKFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK

Query:  LKAILIKKV
        LKAILIKKV
Subjt:  LKAILIKKV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G26360.1 Ribosomal protein S21 family protein

4.7e-24

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Query:  MNSLARNVSCFI-RPSIHTTDSIHFLQNLHCQQQQWRGIRVKVLNGNLERALKFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLAR
        MN++A+ V+  + RPS            L+ Q QQ RGIRVKV + +L++AL  LQ+KMQSSG+ERLIK  QTHHIKNSEK+VLARKNLER+I+S D AR
Subjt:  MNSLARNVSCFI-RPSIHTTDSIHFLQNLHCQQQQWRGIRVKVLNGNLERALKFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLAR

Query:  KLKAILIKKV
        KL++ILIKKV
Subjt:  KLKAILIKKV

Sequences

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CDS sequence

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ATGAACTCGTTGGCGCGGAACGTATCGTGCTTCATCAGACCTTCGATTCACACCACTGACTCGATACATTTCCTGCAGAACCTTCATTGTCAGCAGCAGCAATGG
AGGGGGATCCGAGTGAAGGTACTGAACGGAAATCTAGAGCGGGCACTGAAATTTTTGCAAAGGAAGATGCAATCGAGCGGAATCGAGCGGCTGATTAAACGTGAG
CAGACCCACCACATTAAGAATTCCGAGAAACGAGTTTTGGCACGGAAGAATTTGGAGCGTAAAATTCGATCGCAGGACCTAGCTCGCAAGCTCAAAGCCATCCTT
ATAAAGAAAGTCAGTGATTTCTCAGCACTTGAAGTGTGTAAAGAACATCAATCTTGGAACATTACTCTGTACAATCAAACGCAACAAGTTTCTGCCTATAGAACA
GTTAAAAAATCAGTCTTCCTGCCGAAAGCATCGCCATCTTCATGGCTAGCACAAGATTATGCTTCATAG

mRNA sequence

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Protein sequence

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MNSLARNVSCFIRPSIHTTDSIHFLQNLHCQQQQWRGIRVKVLNGNLERALKFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAIL
IKKVSDFSALEVCKEHQSWNITLYNQTQQVSAYRTVKKSVFLPKASPSSWLAQDYAS

Moc09g40950 (gene) of Bitter gourd (OHB3-1) v2 genome