; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc10g03200 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g03200
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description30S ribosomal protein S11
Genome locationchr10:2226434..2227537
RNA-Seq ExpressionMoc10g03200
SyntenyMoc10g03200
Gene Ontology termsGO:0000028 - ribosomal small subunit assembly (biological process)
GO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0006412 - translation (biological process)
GO:0005763 - mitochondrial small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0048027 - mRNA 5'-UTR binding (molecular function)
GO:0070181 - small ribosomal subunit rRNA binding (molecular function)
InterPro domainsIPR001971 - Ribosomal protein S11
IPR036967 - Ribosomal protein S11 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030891.1 putative ribosomal protein S11, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]7.2e-12381.88Show/hide
Query:  MRRLQLSHLSSLFRSSSLSHGSSSSPFRPSISSFTGSDARSPMASLH-PHRSDLTGSVQLDNQVSGCLDLPQGDSMDVGRQIKVGRAWKALGVMG-----
        MRRL   HLSSLFRSSSLSHGSS S  R SIS F G+DARSPM+SLH  H S+++GSVQLD Q SGC+DLP+GDS++VGR+I VGRAWKALG  G     
Subjt:  MRRLQLSHLSSLFRSSSLSHGSSSSPFRPSISSFTGSDARSPMASLH-PHRSDLTGSVQLDNQVSGCLDLPQGDSMDVGRQIKVGRAWKALGVMG-----

Query:  -RSRENVSVPYAVNSKCYVHYDSRINADTGRNFKSMNFVRGILEEDGRDFMAGSPFPRPPNMESNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEE
         RS ENVSVPY+ +S+CYVHYD R NADTGRNFKSMNFVRGILEEDG DFM  S FPRPPNME NADIVHVKLMRNNTFITVTDNKGNTKLKAS+GRLEE
Subjt:  -RSRENVSVPYAVNSKCYVHYDSRINADTGRNFKSMNFVRGILEEDGRDFMAGSPFPRPPNMESNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEE

Query:  LKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
        LKGGPKLSRYAAEA AEYVGRES+KLGLKSVVMRVKGFTYFKKK+QAI+SWRDGFTDS+ DQNPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  LKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV

XP_022141322.1 probable ribosomal protein S11, mitochondrial [Momordica charantia]1.3e-153100Show/hide
Query:  MRRLQLSHLSSLFRSSSLSHGSSSSPFRPSISSFTGSDARSPMASLHPHRSDLTGSVQLDNQVSGCLDLPQGDSMDVGRQIKVGRAWKALGVMGRSRENV
        MRRLQLSHLSSLFRSSSLSHGSSSSPFRPSISSFTGSDARSPMASLHPHRSDLTGSVQLDNQVSGCLDLPQGDSMDVGRQIKVGRAWKALGVMGRSRENV
Subjt:  MRRLQLSHLSSLFRSSSLSHGSSSSPFRPSISSFTGSDARSPMASLHPHRSDLTGSVQLDNQVSGCLDLPQGDSMDVGRQIKVGRAWKALGVMGRSRENV

Query:  SVPYAVNSKCYVHYDSRINADTGRNFKSMNFVRGILEEDGRDFMAGSPFPRPPNMESNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKL
        SVPYAVNSKCYVHYDSRINADTGRNFKSMNFVRGILEEDGRDFMAGSPFPRPPNMESNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKL
Subjt:  SVPYAVNSKCYVHYDSRINADTGRNFKSMNFVRGILEEDGRDFMAGSPFPRPPNMESNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKL

Query:  SRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
        SRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  SRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV

XP_022942058.1 probable ribosomal protein S11, mitochondrial [Cucurbita moschata]2.7e-12281.53Show/hide
Query:  MRRLQLSHLSSLFRSSSLSHGSSSSPFRPSISSFTGSDARSPMASLH-PHRSDLTGSVQLDNQVSGCLDLPQGDSMDVGRQIKVGRAWKALGVMG-----
        MRRL   HLSSLFRSSSLSHGSS S  R SIS F G+DARSPM+SLH  H S+++GSVQLD Q SGC++LP+GDS++VGR+I VGRAWKALG  G     
Subjt:  MRRLQLSHLSSLFRSSSLSHGSSSSPFRPSISSFTGSDARSPMASLH-PHRSDLTGSVQLDNQVSGCLDLPQGDSMDVGRQIKVGRAWKALGVMG-----

Query:  -RSRENVSVPYAVNSKCYVHYDSRINADTGRNFKSMNFVRGILEEDGRDFMAGSPFPRPPNMESNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEE
         RS ENVSVPY+ +S+CYVHYD R NADTGRNFKSMNFVRGILEEDG DFM  S FPRPPNME NADIVHVKLMRNNTFITVTDNKGNTKLKAS+GRLEE
Subjt:  -RSRENVSVPYAVNSKCYVHYDSRINADTGRNFKSMNFVRGILEEDGRDFMAGSPFPRPPNMESNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEE

Query:  LKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
        LKGGPKLSRYAAEA AEYVGRES+KLGLKSVVMRVKGFTYFKKK+QAI+SWRDGFTDS+ DQNPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  LKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV

XP_022999735.1 probable ribosomal protein S11, mitochondrial [Cucurbita maxima]1.5e-12383.28Show/hide
Query:  MRRLQLSHLSSLFRSSSLSHGSSSSPFRPSISSFTGSDARSPMASLH-PHRSDLTGSVQLDNQVSGCLDLPQGDSMDVGRQIKVGRAWKALGVMG-----
        MRRL L HLSSLFRSSSLSHGSS S  R SIS F G+D RSPM SLH  H SDL+GSVQLD Q SGC+DLP+GDS++VGR+I VGRAWKALG  G     
Subjt:  MRRLQLSHLSSLFRSSSLSHGSSSSPFRPSISSFTGSDARSPMASLH-PHRSDLTGSVQLDNQVSGCLDLPQGDSMDVGRQIKVGRAWKALGVMG-----

Query:  -RSRENVSVPYAVNSKCYVHYDSRINADTGRNFKSMNFVRGILEEDGRDFMAGSPFPRPPNMESNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEE
         RS ENVSVPY+ +S+CYVHYD   NADTGRNFKSMNFVRGILEEDG +FM  S FPRPPNME NADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEE
Subjt:  -RSRENVSVPYAVNSKCYVHYDSRINADTGRNFKSMNFVRGILEEDGRDFMAGSPFPRPPNMESNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEE

Query:  LKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
        LKGGPKLSRYAAEA AEYVGRESRKLGLKSVVMRVKGFTYFKKK+QAI+SWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  LKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV

XP_023526167.1 probable ribosomal protein S11, mitochondrial [Cucurbita pepo subsp. pepo]1.3e-11980.84Show/hide
Query:  MRRLQLSHLSSLFRSSSLSHGSSSSPFRPSISSFTGSDARSPMASLHPHR-SDLTGSVQLDNQVSGCLDLPQGDSMDVGRQIKVGRAWKALGVMG-----
        MRRL L HLSSLFRSSSLSHGSS S  R SIS F G+DARSPM+SLH  R S+++GSVQ+D Q SGC+DLP+GDS++VGR+I VGRA K LG  G     
Subjt:  MRRLQLSHLSSLFRSSSLSHGSSSSPFRPSISSFTGSDARSPMASLHPHR-SDLTGSVQLDNQVSGCLDLPQGDSMDVGRQIKVGRAWKALGVMG-----

Query:  -RSRENVSVPYAVNSKCYVHYDSRINADTGRNFKSMNFVRGILEEDGRDFMAGSPFPRPPNMESNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEE
         RS ENVSVPY+ +S+CYVHYD R NADTGRNFKSMNFVRGILEED  DFM  S FPRPPNME NADIVHVKLMRNNTFITVTDNKGNTKLKAS+GRLEE
Subjt:  -RSRENVSVPYAVNSKCYVHYDSRINADTGRNFKSMNFVRGILEEDGRDFMAGSPFPRPPNMESNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEE

Query:  LKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
        LKGGPKLSRYAAEA AEYVGRES+KLGLKSVVMRVKGFTYFKKK+QAI+SWRDGFTDS+ DQNPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  LKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV

TrEMBL top hitse value%identityAlignment
A0A0A0KVQ8 Uncharacterized protein2.7e-9971.43Show/hide
Query:  MRRLQLSHLSSLFRSSSLSHGSSSSPFRPSISSFTGSDARSPMASLHPHRSDLTGSVQLDNQVSGCLDLPQGDSMDVGRQIKVGRAWKALGVMG------
        M +L LSHLSSLFRSSSLS   S SP R SIS F GSDA S M+SL  HRSDLTGS+Q  NQ SGCL     DS +VGR+I VGR WK++GV G      
Subjt:  MRRLQLSHLSSLFRSSSLSHGSSSSPFRPSISSFTGSDARSPMASLHPHRSDLTGSVQLDNQVSGCLDLPQGDSMDVGRQIKVGRAWKALGVMG------

Query:  RSRENVSVPYAVNSKCYVHYDSRIN-ADTGRNFKSMNFVRGILEEDGRDFMAGSPFPRPPNMESNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEE
        R  E VS+PY+++S+CY  YD+R N  DTGRN K MNFVRGILEE+ R F     F RP NME NADIVH+KLMRNN+F+TVTDNKGNTKLKASAGRLE 
Subjt:  RSRENVSVPYAVNSKCYVHYDSRIN-ADTGRNFKSMNFVRGILEEDGRDFMAGSPFPRPPNMESNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEE

Query:  LKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
          GG KLSRY+A++IAEYVGRESRKLGLKSVVMRVKGFT+FKKK+QAI+SWRDGFTDSR+DQNPIVY+EDTTRRAHNGCRLPK+RRV
Subjt:  LKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV

A0A5A7TPI6 Putative ribosomal protein S119.9e-9469.44Show/hide
Query:  MRRLQLSHLSSLFRSSSLSHGSSSSPFRPSISSFTGSDARSPMASLHPHRSDLTGSVQLDNQVSGCLDLPQGDSMDVGRQIKVGRAWKALGVMG------
        M +L LSHLS LFRSSSLS   S SP R SIS F GSDA S  +S  P  S LTGS+Q  N  SG           VGR+I VGR WKA+GV G      
Subjt:  MRRLQLSHLSSLFRSSSLSHGSSSSPFRPSISSFTGSDARSPMASLHPHRSDLTGSVQLDNQVSGCLDLPQGDSMDVGRQIKVGRAWKALGVMG------

Query:  RSRENVSVPYAVNSKCYVHYDSRIN-ADTGRNFKSMNFVRGILEEDGRDFMAGSPFPRPPNMESNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEE
        RS E+VSVPY+++S+CY  YD+R N  DTGRN K++NFVRGILEED + F     + RP NME NADIVH+KLMRNN F+TVTDNKGNTKLKASAGRLEE
Subjt:  RSRENVSVPYAVNSKCYVHYDSRIN-ADTGRNFKSMNFVRGILEEDGRDFMAGSPFPRPPNMESNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEE

Query:  LK-GGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
        LK GG KLSRY+ ++IAEYVGRESRKLGLKSVVMRVKGFT+FKKK+QAI+SWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPK+RRV
Subjt:  LK-GGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV

A0A6J1CJJ5 probable ribosomal protein S11, mitochondrial6.5e-154100Show/hide
Query:  MRRLQLSHLSSLFRSSSLSHGSSSSPFRPSISSFTGSDARSPMASLHPHRSDLTGSVQLDNQVSGCLDLPQGDSMDVGRQIKVGRAWKALGVMGRSRENV
        MRRLQLSHLSSLFRSSSLSHGSSSSPFRPSISSFTGSDARSPMASLHPHRSDLTGSVQLDNQVSGCLDLPQGDSMDVGRQIKVGRAWKALGVMGRSRENV
Subjt:  MRRLQLSHLSSLFRSSSLSHGSSSSPFRPSISSFTGSDARSPMASLHPHRSDLTGSVQLDNQVSGCLDLPQGDSMDVGRQIKVGRAWKALGVMGRSRENV

Query:  SVPYAVNSKCYVHYDSRINADTGRNFKSMNFVRGILEEDGRDFMAGSPFPRPPNMESNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKL
        SVPYAVNSKCYVHYDSRINADTGRNFKSMNFVRGILEEDGRDFMAGSPFPRPPNMESNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKL
Subjt:  SVPYAVNSKCYVHYDSRINADTGRNFKSMNFVRGILEEDGRDFMAGSPFPRPPNMESNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKL

Query:  SRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
        SRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  SRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV

A0A6J1FTT5 probable ribosomal protein S11, mitochondrial1.3e-12281.53Show/hide
Query:  MRRLQLSHLSSLFRSSSLSHGSSSSPFRPSISSFTGSDARSPMASLH-PHRSDLTGSVQLDNQVSGCLDLPQGDSMDVGRQIKVGRAWKALGVMG-----
        MRRL   HLSSLFRSSSLSHGSS S  R SIS F G+DARSPM+SLH  H S+++GSVQLD Q SGC++LP+GDS++VGR+I VGRAWKALG  G     
Subjt:  MRRLQLSHLSSLFRSSSLSHGSSSSPFRPSISSFTGSDARSPMASLH-PHRSDLTGSVQLDNQVSGCLDLPQGDSMDVGRQIKVGRAWKALGVMG-----

Query:  -RSRENVSVPYAVNSKCYVHYDSRINADTGRNFKSMNFVRGILEEDGRDFMAGSPFPRPPNMESNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEE
         RS ENVSVPY+ +S+CYVHYD R NADTGRNFKSMNFVRGILEEDG DFM  S FPRPPNME NADIVHVKLMRNNTFITVTDNKGNTKLKAS+GRLEE
Subjt:  -RSRENVSVPYAVNSKCYVHYDSRINADTGRNFKSMNFVRGILEEDGRDFMAGSPFPRPPNMESNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEE

Query:  LKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
        LKGGPKLSRYAAEA AEYVGRES+KLGLKSVVMRVKGFTYFKKK+QAI+SWRDGFTDS+ DQNPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  LKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV

A0A6J1KGF8 probable ribosomal protein S11, mitochondrial7.0e-12483.28Show/hide
Query:  MRRLQLSHLSSLFRSSSLSHGSSSSPFRPSISSFTGSDARSPMASLH-PHRSDLTGSVQLDNQVSGCLDLPQGDSMDVGRQIKVGRAWKALGVMG-----
        MRRL L HLSSLFRSSSLSHGSS S  R SIS F G+D RSPM SLH  H SDL+GSVQLD Q SGC+DLP+GDS++VGR+I VGRAWKALG  G     
Subjt:  MRRLQLSHLSSLFRSSSLSHGSSSSPFRPSISSFTGSDARSPMASLH-PHRSDLTGSVQLDNQVSGCLDLPQGDSMDVGRQIKVGRAWKALGVMG-----

Query:  -RSRENVSVPYAVNSKCYVHYDSRINADTGRNFKSMNFVRGILEEDGRDFMAGSPFPRPPNMESNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEE
         RS ENVSVPY+ +S+CYVHYD   NADTGRNFKSMNFVRGILEEDG +FM  S FPRPPNME NADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEE
Subjt:  -RSRENVSVPYAVNSKCYVHYDSRINADTGRNFKSMNFVRGILEEDGRDFMAGSPFPRPPNMESNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEE

Query:  LKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
        LKGGPKLSRYAAEA AEYVGRESRKLGLKSVVMRVKGFTYFKKK+QAI+SWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  LKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV

SwissProt top hitse value%identityAlignment
A5D5E6 30S ribosomal protein S111.7e-1039.17Show/hide
Query:  IVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVY
        + H+K   NNT +T+TD KGNT   +SAG++   KG  K + +AA+  AE   RE+ + GLK V + VKG      +  AI S +    +       +  
Subjt:  IVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVY

Query:  IEDTTRRAHNGCRLPKQRRV
        I+D T   HNGCR PK+RRV
Subjt:  IEDTTRRAHNGCRLPKQRRV

A8ETK4 30S ribosomal protein S111.7e-1035.83Show/hide
Query:  IVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVY
        IVH+    NNT +TVTDN GN    +SAG L   KG  K + +AA+A  E    ++ + G+K+V ++++G    +      +   DG          + +
Subjt:  IVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVY

Query:  IEDTTRRAHNGCRLPKQRRV
        ++D T  AHNGCR PK+RRV
Subjt:  IEDTTRRAHNGCRLPKQRRV

P46746 Ribosomal protein S11, mitochondrial1.2e-1135.71Show/hide
Query:  MESNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSD
        +E  + IVH++   NNT IT+TD +GNT+   SAG L   K   K + YA+ A AE +  ++   G +++++++KG  Y KK               +  
Subjt:  MESNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSD

Query:  QNPIVYIEDTTRRAHNGCRLPKQRRV
           I  I++ T  AHNGCR PK+RRV
Subjt:  QNPIVYIEDTTRRAHNGCRLPKQRRV

Q0BYD7 30S ribosomal protein S115.0e-1037.5Show/hide
Query:  IVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVY
        IVHV    NNT +T+TD +GNT   +S+G +   KG  K + YAA+  AE   +++++ GL++V +RV+G    ++     +    G T        +  
Subjt:  IVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVY

Query:  IEDTTRRAHNGCRLPKQRRV
        I DTT   HNGCR PK+RRV
Subjt:  IEDTTRRAHNGCRLPKQRRV

Q8VZT8 Probable ribosomal protein S11, mitochondrial1.3e-5057.41Show/hide
Query:  NADTGRNFKSMNFVRGILEEDGRDFMAGSPFPRPPNMESNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRK
        N+ +G     ++FVR ++E++GR         + PN+E+NADI+H+K++RNNTF+TVTD+KGN K KA++G L +LKGG K++ Y A+A AE +GR ++ 
Subjt:  NADTGRNFKSMNFVRGILEEDGRDFMAGSPFPRPPNMESNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRK

Query:  LGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
        +GLKSVV++V GFT+F KK++AI+++RDGFT+SRSDQNPIVYIEDTTR+AHNGCRLP++RRV
Subjt:  LGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV

Arabidopsis top hitse value%identityAlignment
AT1G31817.1 Ribosomal L18p/L5e family protein9.3e-5257.41Show/hide
Query:  NADTGRNFKSMNFVRGILEEDGRDFMAGSPFPRPPNMESNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRK
        N+ +G     ++FVR ++E++GR         + PN+E+NADI+H+K++RNNTF+TVTD+KGN K KA++G L +LKGG K++ Y A+A AE +GR ++ 
Subjt:  NADTGRNFKSMNFVRGILEEDGRDFMAGSPFPRPPNMESNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRK

Query:  LGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
        +GLKSVV++V GFT+F KK++AI+++RDGFT+SRSDQNPIVYIEDTTR+AHNGCRLP++RRV
Subjt:  LGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV

ATCG00750.1 ribosomal protein S112.9e-0530Show/hide
Query:  IVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVY
        ++HV+   NNT +TVTD +G     +SAG     +G  + + +AA+  A    R     G++   +R+KG    +      +  R G          + +
Subjt:  IVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVY

Query:  IEDTTRRAHNGCRLPKQRRV
        + D T   HNGCR PK+RRV
Subjt:  IEDTTRRAHNGCRLPKQRRV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCCGACTTCAGCTCTCTCACCTCTCTTCTCTCTTCCGTTCTTCATCTCTCTCACATGGCTCTTCTTCTTCTCCTTTTCGCCCCTCCATTTCCTCATTCACT
GGCTCGGATGCTCGCTCTCCCATGGCCTCCCTCCACCCTCATCGATCAGATCTCACTGGATCCGTTCAACTAGACAACCAGGTTTCAGGCTGTCTCGACCTTCCA
CAAGGTGATTCTATGGATGTTGGACGGCAGATTAAAGTAGGACGCGCTTGGAAAGCCTTGGGAGTTATGGGGCGTTCGAGGGAAAATGTCTCAGTTCCTTATGCT
GTTAATTCTAAATGCTATGTACACTACGACAGCCGGATAAATGCTGATACAGGGAGGAACTTCAAGTCCATGAACTTCGTCAGGGGAATTTTAGAGGAAGATGGA
AGGGATTTTATGGCCGGTTCTCCATTTCCTAGACCACCCAATATGGAGTCCAATGCTGATATTGTCCATGTAAAGCTGATGCGTAACAATACATTTATCACTGTC
ACTGACAACAAGGGAAATACAAAGCTTAAGGCCTCAGCTGGCCGTCTGGAAGAACTGAAAGGGGGGCCTAAGCTGTCCCGTTATGCTGCTGAAGCAATTGCAGAG
TATGTTGGCCGCGAGTCTAGAAAATTGGGGTTAAAATCAGTTGTAATGAGGGTGAAAGGCTTTACTTACTTTAAGAAGAAAAGGCAAGCGATCATGAGTTGGAGA
GATGGTTTTACGGATTCTAGGAGCGATCAAAACCCGATTGTCTACATTGAAGATACGACCAGACGCGCCCACAATGGTTGCCGACTCCCGAAGCAACGTCGCGTC
TAG
mRNA sequenceShow/hide mRNA sequence
ATGCGCCGACTTCAGCTCTCTCACCTCTCTTCTCTCTTCCGTTCTTCATCTCTCTCACATGGCTCTTCTTCTTCTCCTTTTCGCCCCTCCATTTCCTCATTCACT
GGCTCGGATGCTCGCTCTCCCATGGCCTCCCTCCACCCTCATCGATCAGATCTCACTGGATCCGTTCAACTAGACAACCAGGTTTCAGGCTGTCTCGACCTTCCA
CAAGGTGATTCTATGGATGTTGGACGGCAGATTAAAGTAGGACGCGCTTGGAAAGCCTTGGGAGTTATGGGGCGTTCGAGGGAAAATGTCTCAGTTCCTTATGCT
GTTAATTCTAAATGCTATGTACACTACGACAGCCGGATAAATGCTGATACAGGGAGGAACTTCAAGTCCATGAACTTCGTCAGGGGAATTTTAGAGGAAGATGGA
AGGGATTTTATGGCCGGTTCTCCATTTCCTAGACCACCCAATATGGAGTCCAATGCTGATATTGTCCATGTAAAGCTGATGCGTAACAATACATTTATCACTGTC
ACTGACAACAAGGGAAATACAAAGCTTAAGGCCTCAGCTGGCCGTCTGGAAGAACTGAAAGGGGGGCCTAAGCTGTCCCGTTATGCTGCTGAAGCAATTGCAGAG
TATGTTGGCCGCGAGTCTAGAAAATTGGGGTTAAAATCAGTTGTAATGAGGGTGAAAGGCTTTACTTACTTTAAGAAGAAAAGGCAAGCGATCATGAGTTGGAGA
GATGGTTTTACGGATTCTAGGAGCGATCAAAACCCGATTGTCTACATTGAAGATACGACCAGACGCGCCCACAATGGTTGCCGACTCCCGAAGCAACGTCGCGTC
TAG
Protein sequenceShow/hide protein sequence
MRRLQLSHLSSLFRSSSLSHGSSSSPFRPSISSFTGSDARSPMASLHPHRSDLTGSVQLDNQVSGCLDLPQGDSMDVGRQIKVGRAWKALGVMGRSRENVSVPYA
VNSKCYVHYDSRINADTGRNFKSMNFVRGILEEDGRDFMAGSPFPRPPNMESNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAE
YVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV