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Moc10g04710 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g04710
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionDNA repair and recombination protein RAD54-like isoform 1
Genome locationchr10:3271295..3272238
RNA-Seq ExpressionMoc10g04710
SyntenyMoc10g04710
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011651245.1 uncharacterized protein LOC105434859 [Cucumis sativus]3.1e-5976.88Show/hide
Query:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR-----KTTLRDELKVNEDDDNGDGESFPKLTKSSAG-C
        MDPRISFSNDF+ET+QPLKLENIYREAPVSSDFEF+VKDR MI ADEIFFQG+LLPLKDS R     KTTLRDEL+VNE++D+    SFPK TK S+G C
Subjt:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR-----KTTLRDELKVNEDDDNGDGESFPKLTKSSAG-C

Query:  WRERFGFRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNGNCYLKKANPQR
        W+E+FGFR+SH   KKQSR+E VLKTV EE++TSVFLHEDLINIARKNG CYLKKAN QR
Subjt:  WRERFGFRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNGNCYLKKANPQR

XP_022149273.1 uncharacterized protein LOC111017734 [Momordica charantia]5.8e-82100Show/hide
Query:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSRKTTLRDELKVNEDDDNGDGESFPKLTKSSAGCWRERFG
        MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSRKTTLRDELKVNEDDDNGDGESFPKLTKSSAGCWRERFG
Subjt:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSRKTTLRDELKVNEDDDNGDGESFPKLTKSSAGCWRERFG

Query:  FRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNGNCYLKKANPQR
        FRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNGNCYLKKANPQR
Subjt:  FRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNGNCYLKKANPQR

XP_022942817.1 uncharacterized protein LOC111447733 [Cucurbita moschata]2.4e-5978.62Show/hide
Query:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR----KTTLRDELKVNEDDDNGDGE-SFPKLTKSSAGCW
        MDPRISFSNDF+ETQ PLKLENIYREAPVSSDFEF+VKDR MI ADEIF QGRLLPLKDSSR    KTTLRDEL+VNEDDD  + + SFPKLTK+    W
Subjt:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR----KTTLRDELKVNEDDDNGDGE-SFPKLTKSSAGCW

Query:  RERFGFRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNGNCYLKKANPQR
        +E+FGFRRSH   +KQ R+EGVLKTV EE+K+SVFLHEDLINIARKNGNCYLKKAN QR
Subjt:  RERFGFRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNGNCYLKKANPQR

XP_022983127.1 uncharacterized protein LOC111481767 [Cucurbita maxima]4.8e-6079.11Show/hide
Query:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR----KTTLRDELKVNEDDDNGDGESFPKLTKSSAGCWR
        MDPRISFSNDF+ETQ PLKLENIYREAPVSSDFEF+VKDR MI ADEIF QGRLLPLKDSSR    KTTLRDEL+VNEDDD  +  SFPKLTK+    W+
Subjt:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR----KTTLRDELKVNEDDDNGDGESFPKLTKSSAGCWR

Query:  ERFGFRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNGNCYLKKANPQR
        E+FGFRRSH   KKQ R+EGVLKTV EE+K+SVFLHEDLINIARKNGNCYLKKA  QR
Subjt:  ERFGFRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNGNCYLKKANPQR

XP_038877999.1 uncharacterized protein LOC120070205 [Benincasa hispida]5.4e-6480.75Show/hide
Query:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR------KTTLRDELKVNEDDDNGDGESFPKLTK-SSAG
        MDPRISFSNDF+ET+Q LK+ENIYREAPVSSDFEF+VK+R MI ADEIFFQG+LLPLKDSSR      KTTLRDEL+VNE+DD  D  SFPK TK SSA 
Subjt:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR------KTTLRDELKVNEDDDNGDGESFPKLTK-SSAG

Query:  CWRERFGFRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNGNCYLKKANPQR
        CW+E+FGFRRSH  PKKQSR+EGVLKTV EEEKTSVFLHEDLINIARKNGNCYLKKAN QR
Subjt:  CWRERFGFRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNGNCYLKKANPQR

TrEMBL top hitse value%identityAlignment
A0A0A0L727 Uncharacterized protein1.5e-5976.88Show/hide
Query:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR-----KTTLRDELKVNEDDDNGDGESFPKLTKSSAG-C
        MDPRISFSNDF+ET+QPLKLENIYREAPVSSDFEF+VKDR MI ADEIFFQG+LLPLKDS R     KTTLRDEL+VNE++D+    SFPK TK S+G C
Subjt:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR-----KTTLRDELKVNEDDDNGDGESFPKLTKSSAG-C

Query:  WRERFGFRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNGNCYLKKANPQR
        W+E+FGFR+SH   KKQSR+E VLKTV EE++TSVFLHEDLINIARKNG CYLKKAN QR
Subjt:  WRERFGFRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNGNCYLKKANPQR

A0A1S3C2L8 uncharacterized protein LOC1034961609.7e-5976.25Show/hide
Query:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR-----KTTLRDELKVNEDDDNGDGESFPKLTK-SSAGC
        MDPRISFSNDF+ET+QPLKLENIYREAPVSSDFEF+VKDR MI ADEIFFQG+LLPLKDS R     KTTLRDEL+VNE++D+    SFPK TK SS+ C
Subjt:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR-----KTTLRDELKVNEDDDNGDGESFPKLTK-SSAGC

Query:  WRERFGFRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNGNCYLKKANPQR
        W+E+FGFR+ H   KKQSR+E VLKTV EE++TSVFLHEDLINIARKNG CYLKKAN QR
Subjt:  WRERFGFRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNGNCYLKKANPQR

A0A6J1D6D4 uncharacterized protein LOC1110177342.8e-82100Show/hide
Query:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSRKTTLRDELKVNEDDDNGDGESFPKLTKSSAGCWRERFG
        MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSRKTTLRDELKVNEDDDNGDGESFPKLTKSSAGCWRERFG
Subjt:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSRKTTLRDELKVNEDDDNGDGESFPKLTKSSAGCWRERFG

Query:  FRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNGNCYLKKANPQR
        FRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNGNCYLKKANPQR
Subjt:  FRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNGNCYLKKANPQR

A0A6J1FRB6 uncharacterized protein LOC1114477331.1e-5978.62Show/hide
Query:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR----KTTLRDELKVNEDDDNGDGE-SFPKLTKSSAGCW
        MDPRISFSNDF+ETQ PLKLENIYREAPVSSDFEF+VKDR MI ADEIF QGRLLPLKDSSR    KTTLRDEL+VNEDDD  + + SFPKLTK+    W
Subjt:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR----KTTLRDELKVNEDDDNGDGE-SFPKLTKSSAGCW

Query:  RERFGFRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNGNCYLKKANPQR
        +E+FGFRRSH   +KQ R+EGVLKTV EE+K+SVFLHEDLINIARKNGNCYLKKAN QR
Subjt:  RERFGFRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNGNCYLKKANPQR

A0A6J1IYE6 uncharacterized protein LOC1114817672.3e-6079.11Show/hide
Query:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR----KTTLRDELKVNEDDDNGDGESFPKLTKSSAGCWR
        MDPRISFSNDF+ETQ PLKLENIYREAPVSSDFEF+VKDR MI ADEIF QGRLLPLKDSSR    KTTLRDEL+VNEDDD  +  SFPKLTK+    W+
Subjt:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR----KTTLRDELKVNEDDDNGDGESFPKLTKSSAGCWR

Query:  ERFGFRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNGNCYLKKANPQR
        E+FGFRRSH   KKQ R+EGVLKTV EE+K+SVFLHEDLINIARKNGNCYLKKA  QR
Subjt:  ERFGFRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNGNCYLKKANPQR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G79060.1 unknown protein2.1e-0528.17Show/hide
Query:  DPRISFSNDFIETQQPLKLENIYRE--APVSSDFEFTVKDR--SMIPADEIFFQGRLLPLKDSSRKTTL-----RDELKVNEDDDNGDGESFPKLTKSSA
        +PR SFS D            I +E  A  + DFEF +++    M+PADE+F  G+L+  +   + T +     R E+   E    GD  SF       +
Subjt:  DPRISFSNDFIETQQPLKLENIYRE--APVSSDFEFTVKDR--SMIPADEIFFQGRLLPLKDSSRKTTL-----RDELKVNEDDDNGDGESFPKLTKSSA

Query:  GCWRERFGFRRSHIGPKKQSRSEGVLKTVPEEEKTSV--FLH
          WR+  G +R      K + +     T P    +S+  FLH
Subjt:  GCWRERFGFRRSHIGPKKQSRSEGVLKTVPEEEKTSV--FLH

AT3G19200.1 unknown protein7.4e-1146.43Show/hide
Query:  MDPRISFSNDFIETQQPLKLENI-----YREAPVSSDFEFTVKDRSMI-PADEIFFQGRLLPLKDSSRK--TTLRDELKVNEDD
        +D RISFSNDF ++              Y+EAPVSSDF+F V++      ADEIFF G LLPL+ ++++  TTLRDEL   + D
Subjt:  MDPRISFSNDFIETQQPLKLENI-----YREAPVSSDFEFTVKDRSMI-PADEIFFQGRLLPLKDSSRK--TTLRDELKVNEDD

AT3G50640.1 unknown protein1.3e-1541.94Show/hide
Query:  RISFSNDFIETQQP---LKLENIYREAPV---SSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR-KTTLRDELKVNEDDDNGDGESF---PKLTKSSA-
        RISFSN+F+E +      K  NI   +     S+DF F+V D SMIPADEIF +G++LP K++S    TL +EL   E+    DG +F   P L  SS+ 
Subjt:  RISFSNDFIETQQP---LKLENIYREAPV---SSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR-KTTLRDELKVNEDDDNGDGESF---PKLTKSSA-

Query:  ---GCWRERFGFRRSHIGPKKQSR
           G WRE  G +R+H+  KK  +
Subjt:  ---GCWRERFGFRRSHIGPKKQSR

AT4G34419.1 unknown protein5.9e-1647.46Show/hide
Query:  DPRISFSNDFIETQQPLKLENIYREAPVSS-DFEFTVKDRSMIPADEIFFQGRLLPLKD----SSRKTTLRDELKVNEDDDNGDGESFPKLTKSSAGCWR
        +PRISFS+ F  T+  +     Y+EAPVSS DFEF V++ SM  ADEIFF G +LPLK+    + R +TLR+EL         DG+S    +K S+G WR
Subjt:  DPRISFSNDFIETQQPLKLENIYREAPVSS-DFEFTVKDRSMIPADEIFFQGRLLPLKD----SSRKTTLRDELKVNEDDDNGDGESFPKLTKSSAGCWR

Query:  ERFG--FRRSHIGPKKQS
        ER G  F RS    KK S
Subjt:  ERFG--FRRSHIGPKKQS

AT5G66800.1 unknown protein2.2e-1536.09Show/hide
Query:  MDPRISFSNDFIETQQPLKLENIYREAPV----------SSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR-KTTLRDELKVNEDDDNGDGE-------
        M PRISFSNDF+E +   +     R +P+          S +FEF+V + +M+PADE+F +G+LLP K++++ + TLR+EL V ED++ G  +       
Subjt:  MDPRISFSNDFIETQQPLKLENIYREAPV----------SSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR-KTTLRDELKVNEDDDNGDGE-------

Query:  ------SFPKLTKSSAGCWRERFGFRRSHIGPK
              S    + SS G W+   G +R+H+G K
Subjt:  ------SFPKLTKSSAGCWRERFGFRRSHIGPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCAAGAATTTCCTTCTCAAATGACTTTATTGAAACTCAACAGCCATTGAAGCTTGAGAACATCTACAGAGAAGCACCTGTTTCTTCTGATTTTGAGTTCACTGT
GAAGGACAGAAGCATGATTCCTGCAGATGAGATTTTCTTTCAGGGGAGGCTGCTGCCATTGAAGGACAGTTCAAGGAAGACAACTTTGAGGGATGAGCTGAAAGTCAATG
AAGATGATGATAATGGTGATGGTGAAAGTTTTCCTAAGCTAACAAAAAGCTCTGCAGGCTGCTGGAGGGAGAGATTTGGTTTCAGGAGATCCCATATTGGGCCAAAGAAA
CAGAGTAGAAGTGAAGGGGTTCTCAAAACTGTACCAGAGGAAGAGAAAACTAGTGTGTTTCTTCATGAGGACCTCATAAATATTGCAAGGAAAAATGGGAATTGTTACTT
GAAGAAAGCTAACCCACAGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCCAAGAATTTCCTTCTCAAATGACTTTATTGAAACTCAACAGCCATTGAAGCTTGAGAACATCTACAGAGAAGCACCTGTTTCTTCTGATTTTGAGTTCACTGT
GAAGGACAGAAGCATGATTCCTGCAGATGAGATTTTCTTTCAGGGGAGGCTGCTGCCATTGAAGGACAGTTCAAGGAAGACAACTTTGAGGGATGAGCTGAAAGTCAATG
AAGATGATGATAATGGTGATGGTGAAAGTTTTCCTAAGCTAACAAAAAGCTCTGCAGGCTGCTGGAGGGAGAGATTTGGTTTCAGGAGATCCCATATTGGGCCAAAGAAA
CAGAGTAGAAGTGAAGGGGTTCTCAAAACTGTACCAGAGGAAGAGAAAACTAGTGTGTTTCTTCATGAGGACCTCATAAATATTGCAAGGAAAAATGGGAATTGTTACTT
GAAGAAAGCTAACCCACAGAGATGA
Protein sequenceShow/hide protein sequence
MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSRKTTLRDELKVNEDDDNGDGESFPKLTKSSAGCWRERFGFRRSHIGPKK
QSRSEGVLKTVPEEEKTSVFLHEDLINIARKNGNCYLKKANPQR