; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc10g06480 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g06480
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionTetratricopeptide-like helical
Genome locationchr10:4671153..4671554
RNA-Seq ExpressionMoc10g06480
SyntenyMoc10g06480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577295.1 hypothetical protein SDJN03_24869, partial [Cucurbita argyrosperma subsp. sororia]2.3e-2656.15Show/hide
Query:  VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAW
        VSLEALAMAG+ S+ WAMDAEEWERNE EN V PPHLLADED+D D    ++TST  N  FP  G F S RR+D GA  ++CF  I+C    KS+EKRA 
Subjt:  VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAW

Query:  NFLRSMGTMVGAIVGFLMVMTTKIITSQGS
        N + S+  +V  I+GFL+V   KII++  S
Subjt:  NFLRSMGTMVGAIVGFLMVMTTKIITSQGS

KAG6600647.1 hypothetical protein SDJN03_05880, partial [Cucurbita argyrosperma subsp. sororia]6.9e-2356.82Show/hide
Query:  VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAW
        VSLEALAMAG+DS+  AMDAEEWERNE E + IPPHLLADED ++D+          + KFPA     S  RKD+G GGV C P IM  + RK  EKR  
Subjt:  VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAW

Query:  NFLRSMGTMVGAIVGFLMVMTTKIITSQGSKS
        N L SM  +  A+VGFLM MT KII S+ SKS
Subjt:  NFLRSMGTMVGAIVGFLMVMTTKIITSQGSKS

KAG7015383.1 hypothetical protein SDJN02_23018, partial [Cucurbita argyrosperma subsp. argyrosperma]6.6e-2655.38Show/hide
Query:  VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAW
        VSLEALAMAG+ S+ WAMDAEEWERNE EN V PPHLLADED+D D    ++TST  N  FP  G F S  R+D GA  ++CF  I+C    KS+EKRA 
Subjt:  VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAW

Query:  NFLRSMGTMVGAIVGFLMVMTTKIITSQGS
        N + S+  +V  I+GFL+V   KII++  S
Subjt:  NFLRSMGTMVGAIVGFLMVMTTKIITSQGS

TYK16880.1 Tetratricopeptide-like helical [Cucumis melo var. makuwa]3.4e-2253.44Show/hide
Query:  VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAW
        VSLEALAMAG+DS+ W MDA+EWERNE +  V+PPHLLADE++D+D +   +TST  N  F   G FG  RR+D  A G      I      K IEKRA 
Subjt:  VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAW

Query:  NFLRSMGTMVGAIVGFLMVMTTKIITSQGSK
        N + S+  +V  I+GFLMVMT KII++Q SK
Subjt:  NFLRSMGTMVGAIVGFLMVMTTKIITSQGSK

XP_022943015.1 uncharacterized protein LOC111447880 [Cucurbita moschata]1.1e-2561.36Show/hide
Query:  VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAW
        VSLEALAMAG+DS+ WAMDAEEWERNE E   IPPHLLADED     DE D  ST    KFPA     S  RKDDG GGV C P IM  + RK  EKR  
Subjt:  VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAW

Query:  NFLRSMGTMVGAIVGFLMVMTTKIITSQGSKS
        N L SM  +  A+VGFLM MT KII S+ SKS
Subjt:  NFLRSMGTMVGAIVGFLMVMTTKIITSQGSKS

TrEMBL top hitse value%identityAlignment
A0A0A0KU90 Uncharacterized protein1.9e-1050Show/hide
Query:  VSLEALAMAGMDSDLWAMDAEEWERN--ETEN-HVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEK
        VSLEALAMAG+DS+ WAMDAEEW+ N  + EN  +IPPHLLADEDE+                  A  L  SG RKDDG   V+C         RK +EK
Subjt:  VSLEALAMAGMDSDLWAMDAEEWERN--ETEN-HVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEK

Query:  RA
        RA
Subjt:  RA

A0A0A0KWE7 Uncharacterized protein1.0e-2455.97Show/hide
Query:  VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKD---DGAGGVYCFPAIMCQYFRKSIEK
        VSLEALAMAG+DS+ WAMDAEEWERNE +  V+PPHLLADE++D+D DE   TST  N  FP  G F   R +D   DG  G +    I C    K IEK
Subjt:  VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKD---DGAGGVYCFPAIMCQYFRKSIEK

Query:  RAWNFLRSMGTMVGAIVGFLMVMTTKIITSQGSK
        RA N + S+  +V  I+GFLMVMT KII++Q SK
Subjt:  RAWNFLRSMGTMVGAIVGFLMVMTTKIITSQGSK

A0A5A7TS68 Tetratricopeptide-like helical5.9e-2052.03Show/hide
Query:  VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAW
        VSLEALAMAG+DS+ W MDA+EWERNE +  V+PPHLLADE++D+D +   +TST  N  F   G FG  RR+D  A G +    I      K IEKRA 
Subjt:  VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAW

Query:  NFLRSMGTMVGAIVGFLMVMTTK
        N + S+  +V  I+GFLMVMT +
Subjt:  NFLRSMGTMVGAIVGFLMVMTTK

A0A5D3CZU0 Tetratricopeptide-like helical1.7e-2253.44Show/hide
Query:  VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAW
        VSLEALAMAG+DS+ W MDA+EWERNE +  V+PPHLLADE++D+D +   +TST  N  F   G FG  RR+D  A G      I      K IEKRA 
Subjt:  VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAW

Query:  NFLRSMGTMVGAIVGFLMVMTTKIITSQGSK
        N + S+  +V  I+GFLMVMT KII++Q SK
Subjt:  NFLRSMGTMVGAIVGFLMVMTTKIITSQGSK

A0A6J1FX98 uncharacterized protein LOC1114478805.5e-2661.36Show/hide
Query:  VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAW
        VSLEALAMAG+DS+ WAMDAEEWERNE E   IPPHLLADED     DE D  ST    KFPA     S  RKDDG GGV C P IM  + RK  EKR  
Subjt:  VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAW

Query:  NFLRSMGTMVGAIVGFLMVMTTKIITSQGSKS
        N L SM  +  A+VGFLM MT KII S+ SKS
Subjt:  NFLRSMGTMVGAIVGFLMVMTTKIITSQGSKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G22320.1 unknown protein1.8e-0547.06Show/hide
Query:  LEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADE--DEDKDKDERD
        +EALAMAG+D   W +  EEWE  E+   V+P HLLAD+  +E++++D +D
Subjt:  LEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADE--DEDKDKDERD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCTTTAGAAGCTTTGGCCATGGCGGGGATGGATTCTGATTTGTGGGCTATGGATGCTGAAGAATGGGAAAGAAATGAGACCGAGAATCATGTCATTCCG
CCGCATTTGTTAGCGGACGAGGATGAGGACAAGGACAAAGACGAGAGAGACATGACGAGTACGACGGGTAACTGTAAGTTTCCGGCCGTTGGATTATTCGGCAGC
GGGCGGAGGAAAGATGACGGTGCTGGTGGTGTGTACTGCTTTCCGGCGATTATGTGCCAATATTTCAGAAAAAGCATAGAGAAGAGAGCGTGGAATTTTCTGAGG
TCAATGGGAACAATGGTGGGAGCTATTGTAGGGTTTCTTATGGTGATGACTACGAAGATAATAACTTCACAAGGATCCAAGTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTCTTTAGAAGCTTTGGCCATGGCGGGGATGGATTCTGATTTGTGGGCTATGGATGCTGAAGAATGGGAAAGAAATGAGACCGAGAATCATGTCATTCCG
CCGCATTTGTTAGCGGACGAGGATGAGGACAAGGACAAAGACGAGAGAGACATGACGAGTACGACGGGTAACTGTAAGTTTCCGGCCGTTGGATTATTCGGCAGC
GGGCGGAGGAAAGATGACGGTGCTGGTGGTGTGTACTGCTTTCCGGCGATTATGTGCCAATATTTCAGAAAAAGCATAGAGAAGAGAGCGTGGAATTTTCTGAGG
TCAATGGGAACAATGGTGGGAGCTATTGTAGGGTTTCTTATGGTGATGACTACGAAGATAATAACTTCACAAGGATCCAAGTCCTAA
Protein sequenceShow/hide protein sequence
MVSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAWNFLR
SMGTMVGAIVGFLMVMTTKIITSQGSKS