CuGenDBv2

Gene ID	Moc10g06580
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Histone H3
Genome location	chr10:4722006..4723894
RNA-Seq Expression	Moc10g06580
Synteny	Moc10g06580
Gene Ontology terms	GO:0006353 - DNA-templated transcription, termination (biological process) GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0000786 - nucleosome (cellular component) GO:0005634 - nucleus (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003690 - double-stranded DNA binding (molecular function) GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domains	IPR000164 - Histone H3/CENP-A IPR007125 - Histone H2A/H2B/H3 IPR009072 - Histone-fold

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6600643.1 hypothetical protein SDJN03_05876, partial [Cucurbita argyrosperma subsp. sororia]

8.9e-63

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRE
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRE
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRE

KAG8097451.1 hypothetical protein GUJ93_ZPchr0013g35923 [Zizania palustris]

8.9e-63

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRE
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRE
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRE

KHG00494.1 Histone H3.3 [Gossypium arboreum]

3.1e-63

99.25

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIREW
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR W
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIREW

PPR83219.1 hypothetical protein GOBAR_AA37497 [Gossypium barbadense]

3.1e-63

99.25

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIREW
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR W
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIREW

RZC44769.1 hypothetical protein C5167_037715 [Papaver somniferum]

8.9e-63

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRE
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRE
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRE

TrEMBL top hits

e value

%identity

Alignment

A0A0B0MLX3 Histone H3.3

1.5e-63

99.25

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIREW
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR W
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIREW

A0A0V0H4H2 Putative ovule protein

7.4e-63

83.14

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRI---REWVLILCKGALVLLELCSNSSGAVRFLFYLQVEYLHG
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRI   R    +LC+     L+  S    +V FL  L   YL G
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRI---REWVLILCKGALVLLELCSNSSGAVRFLFYLQVEYLHG

A0A2P5VWN4 Histone domain-containing protein

1.5e-63

99.25

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIREW
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR W
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIREW

A0A445HHT0 Histone H3.2 (Fragment)

5.6e-63

97.79

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIREWVL
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR+ V+
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIREWVL

A0A4Y7IBI5 Histone domain-containing protein

4.3e-63

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRE
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRE
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRE

SwissProt top hits

e value

%identity

Alignment

P59169 Histone H3.3

5.8e-65

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR

P69245 Histone H3.3

5.8e-65

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR

Q3C2E5 Histone H3.3

5.8e-65

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR

Q6RUR1 Histone H3.3

5.8e-65

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR

Q71V89 Histone H3.3

5.8e-65

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR

Arabidopsis top hits

e value

%identity

Alignment

AT4G40030.1 Histone superfamily protein

4.1e-66

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR

AT4G40030.2 Histone superfamily protein

4.1e-66

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR

AT4G40030.3 Histone superfamily protein

4.1e-66

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR

AT4G40040.1 Histone superfamily protein

4.1e-66

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR

AT4G40040.2 Histone superfamily protein

4.1e-66

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCCCGTACCAAGCAAACTGCTCGTAAGTCTACTGGAGGGAAGGCTCCCAGGAAGCAACTGGCCACCAAGGCCGCCCGTAAGTCAGCCCCAACTACAGGAGGGGTGAA
GAAGCCTCACAGATACCGCCCTGGTACTGTTGCTCTTCGTGAAATCCGTAAGTACCAGAAGAGTACTGAGCTCTTGATTAGGAAGTTGCCATTCCAGAGGTTGGTTCGTG
AAATTGCCCAGGACTTCAAGACTGATCTGCGTTTCCAGAGCCACGCTGTTCTGGCTCTGCAAGAGGCAGCTGAGGCATACCTTGTTGGGTTGTTCGAGGACACCAATCTG
TGCGCCATCCACGCCAAGCGTGTTACCATAATGCCTAAAGATATCCAGTTGGCTAGGAGAATCAGGGAATGGGTCTTGATTCTCTGCAAAGGTGCTCTAGTTCTTCTGGA
GTTGTGCTCTAATTCTTCAGGAGCTGTTAGATTCTTATTCTATTTGCAAGTTGAATATCTTCACGGCTCAACAACTGATCTTTCACATCTTGTGGCCTGCTTATGTTTGA
AGCATGAAAAGAAGATACCCACGATCTCTCGCTATGAGACGCCTATCATCAGTTGGTGTTATGTCTTTGGATTGCTTCCAAATCTTCCTACGTACAATTCTGTTTATGTT
GCTAGCTTATCGAATCCTGATTCTTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL
CAIHAKRVTIMPKDIQLARRIREWVLILCKGALVLLELCSNSSGAVRFLFYLQVEYLHGSTTDLSHLVACLCLKHEKKIPTISRYETPIISWCYVFGLLPNLPTYNSVYV
ASLSNPDS

Moc10g06580 (gene) of Bitter gourd (OHB3-1) v2 genome