; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc10g07090 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g07090
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description40S ribosomal protein SA
Genome locationchr10:5132783..5135737
RNA-Seq ExpressionMoc10g07090
SyntenyMoc10g07090
Gene Ontology termsGO:0000028 - ribosomal small subunit assembly (biological process)
GO:0002181 - cytoplasmic translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001865 - Ribosomal protein S2
IPR005707 - Ribosomal protein S2, eukaryotic/archaeal
IPR018130 - Ribosomal protein S2, conserved site
IPR023591 - Ribosomal protein S2, flavodoxin-like domain superfamily
IPR027498 - Ribosomal protein S2, eukaryotic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600605.1 40S ribosomal protein SA, partial [Cucurbita argyrosperma subsp. sororia]1.6e-15090.79Show/hide
Query:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGT QRQL+QKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTW+KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+R GHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVP----AAAAAPASNVEWAQEPVAL-GAADGWDAAVARPPAPPVEAGA
        VDLFFYREPEEAKE EEE+AVAPPDYGIADFGAAPL  D+W  DAQW A D+VP    AAAAAP SNVEWA EPVAL GAADGWD A A PPAP +EAGA
Subjt:  VDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVP----AAAAAPASNVEWAQEPVAL-GAADGWDAAVARPPAPPVEAGA

Query:  PPAS
        PPA+
Subjt:  PPAS

XP_022136902.1 40S ribosomal protein SA-like [Momordica charantia]4.3e-169100Show/hide
Query:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVPAAAAAPASNVEWAQEPVALGAADGWDAAVARPPAPPVEAGAPPASD
        VDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVPAAAAAPASNVEWAQEPVALGAADGWDAAVARPPAPPVEAGAPPASD
Subjt:  VDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVPAAAAAPASNVEWAQEPVALGAADGWDAAVARPPAPPVEAGAPPASD

XP_022152685.1 40S ribosomal protein SA-like [Momordica charantia]1.4e-15191.72Show/hide
Query:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MAT TA RQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTW+KLQ+AARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPL-AVDQWA---PDAQWGASDVVPAAAAAPASNVEWAQEPVALGAADGWDAAVARPPAPPVEAGAPP
        VDLFFYREPEEAKE+EEE    PDYGIADFGAAPL A DQWA    DAQWGA DVVPAAAA P SNVEW+QEPVA GAADGWDAAV  PPAP VE GAPP
Subjt:  VDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPL-AVDQWA---PDAQWGASDVVPAAAAAPASNVEWAQEPVALGAADGWDAAVARPPAPPVEAGAPP

Query:  AS
        AS
Subjt:  AS

XP_022942879.1 40S ribosomal protein SA-like [Cucurbita moschata]9.1e-15191.39Show/hide
Query:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGT QRQL+QKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTW+KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+R GHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVP--AAAAAPASNVEWAQEPVAL-GAADGWDAAVARPPAPPVEAGAPP
        VDLFFYREPEEAKE EEE+AVAPPDYGIADFGAAPL  D+W  DAQW A D+VP  AAAAAP SNVEWA EPVAL GAADGWD A A PPAP +EAGAPP
Subjt:  VDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVP--AAAAAPASNVEWAQEPVAL-GAADGWDAAVARPPAPPVEAGAPP

Query:  AS
        A+
Subjt:  AS

XP_022982113.1 40S ribosomal protein SA-like [Cucurbita maxima]2.0e-15091.39Show/hide
Query:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGT QRQL+QKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTW+KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+R GHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVP--AAAAAPASNVEWAQEPVAL-GAADGWDAAVARPPAPPVEAGAPP
        VDLFFYREPEEAKE EEE+AVAPPDYGIADFGAAPL  D+W  DAQW A D+VP  AAAAAP SNVEWA EPVAL GAADGWDAA A PPAP  E GAPP
Subjt:  VDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVP--AAAAAPASNVEWAQEPVAL-GAADGWDAAVARPPAPPVEAGAPP

Query:  AS
        A+
Subjt:  AS

TrEMBL top hitse value%identityAlignment
A0A5A7TNP4 40S ribosomal protein SA3.2e-14990Show/hide
Query:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATG  QRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTW+KLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+R G+KWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVPAAAAAPASNVEWAQEPVALGAADGWDAAVARPPAPPVEAGAPPASD
        VDLFFYREPEE KE EEEEAVAPPDYGIADFG+APLAVDQW PDAQW AS+V P AAAA  SNVEWAQEPV  GAADGW  A+  PPAP +EA APP+SD
Subjt:  VDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVPAAAAAPASNVEWAQEPVALGAADGWDAAVARPPAPPVEAGAPPASD

A0A6J1C6Q9 40S ribosomal protein SA2.1e-169100Show/hide
Query:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVPAAAAAPASNVEWAQEPVALGAADGWDAAVARPPAPPVEAGAPPASD
        VDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVPAAAAAPASNVEWAQEPVALGAADGWDAAVARPPAPPVEAGAPPASD
Subjt:  VDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVPAAAAAPASNVEWAQEPVALGAADGWDAAVARPPAPPVEAGAPPASD

A0A6J1DEM6 40S ribosomal protein SA6.8e-15291.72Show/hide
Query:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MAT TA RQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTW+KLQ+AARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPL-AVDQWA---PDAQWGASDVVPAAAAAPASNVEWAQEPVALGAADGWDAAVARPPAPPVEAGAPP
        VDLFFYREPEEAKE+EEE    PDYGIADFGAAPL A DQWA    DAQWGA DVVPAAAA P SNVEW+QEPVA GAADGWDAAV  PPAP VE GAPP
Subjt:  VDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPL-AVDQWA---PDAQWGASDVVPAAAAAPASNVEWAQEPVALGAADGWDAAVARPPAPPVEAGAPP

Query:  AS
        AS
Subjt:  AS

A0A6J1FSL7 40S ribosomal protein SA4.4e-15191.39Show/hide
Query:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGT QRQL+QKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTW+KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+R GHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVP--AAAAAPASNVEWAQEPVAL-GAADGWDAAVARPPAPPVEAGAPP
        VDLFFYREPEEAKE EEE+AVAPPDYGIADFGAAPL  D+W  DAQW A D+VP  AAAAAP SNVEWA EPVAL GAADGWD A A PPAP +EAGAPP
Subjt:  VDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVP--AAAAAPASNVEWAQEPVAL-GAADGWDAAVARPPAPPVEAGAPP

Query:  AS
        A+
Subjt:  AS

A0A6J1J410 40S ribosomal protein SA9.8e-15191.39Show/hide
Query:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGT QRQL+QKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTW+KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+R GHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVP--AAAAAPASNVEWAQEPVAL-GAADGWDAAVARPPAPPVEAGAPP
        VDLFFYREPEEAKE EEE+AVAPPDYGIADFGAAPL  D+W  DAQW A D+VP  AAAAAP SNVEWA EPVAL GAADGWDAA A PPAP  E GAPP
Subjt:  VDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVP--AAAAAPASNVEWAQEPVAL-GAADGWDAAVARPPAPPVEAGAPP

Query:  AS
        A+
Subjt:  AS

SwissProt top hitse value%identityAlignment
A5BUU4 40S ribosomal protein SA3.4e-12479.74Show/hide
Query:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MAT T  R LSQKE DIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTW+KLQ+AARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR TI  GHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEEE-EEAVAPPDYGIADFGAAPL----AVDQWAP--DA-QWGASDVVPAAA---AAPASN-VEWAQEPVALG-AADGWDAAVARPPA
        VDLFFYREPEE KE+E +E VA PDYGI D+ A  L      D  AP  DA QWGA   VPA A   A P SN  + A  P A+  A DGWDAA A P A
Subjt:  VDLFFYREPEEAKEEE-EEAVAPPDYGIADFGAAPL----AVDQWAP--DA-QWGASDVVPAAA---AAPASN-VEWAQEPVALG-AADGWDAAVARPPA

Query:  --PPVEAGAPP
          PPV  G PP
Subjt:  --PPVEAGAPP

O22518 40S ribosomal protein SA4.1e-12278.16Show/hide
Query:  ATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAI
        A     RQLSQKEADIQMMLAA+VHLGTKNC+FQMERY+FKRRNDGIYIINLGKTW+KLQ+AARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAI
Subjt:  ATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAI

Query:  AGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMV
        AGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIR G KWDVMV
Subjt:  AGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMV

Query:  DLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPLAVD-QWAPDAQWGASDVVPAAAAAPASNVEWAQEPVALGAADG-WDAAVARP---PAPP
        DLFFYREPEEAK++EEE     DY I DF A  +A D QW        SD VP    A    V W     A  AA G W  AV  P   P PP
Subjt:  DLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPLAVD-QWAPDAQWGASDVVPAAAAAPASNVEWAQEPVALGAADG-WDAAVARP---PAPP

O65751 40S ribosomal protein SA7.8e-12178.57Show/hide
Query:  MATGTA-QRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAH
        MAT TA  RQL+QKEADIQMMLAA+VHLGTKNCNFQMERY+FKRRNDGIYIINLGKTWDKL +AAR+IVAIEN QDIIVQSARPYGQRAVLKFAQYTGAH
Subjt:  MATGTA-QRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM YVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIR G KWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPLAVD-QW--APDAQWGASDVVP-AAAAAPASNVEWAQEPVALGAADGWDAAVARPPAPP
        MVDLFFYREPEEAK+ EE+ VA PDY IADF  + +  D QW  A D  W  +D VP    A PA  V WA      G    W  AV  P   P
Subjt:  MVDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPLAVD-QW--APDAQWGASDVVP-AAAAAPASNVEWAQEPVALGAADGWDAAVARPPAPP

O80377 40S ribosomal protein SA1.7e-12379.11Show/hide
Query:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MA+G   R+LS  EADIQMM AAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTW+KL +AARVIV+IENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG I  GHKW+VM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPL-AVDQW--APDAQWGASDVVPAAAAAPASNVEWAQE-PVALGAADGWDAAVARPPAP
        VDLFFYREPEE K++EEE +   DY +AD+ AAP+   DQW   PDAQWG   V PA +A PA    W    P+   A DGWDAA A PP P
Subjt:  VDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPL-AVDQW--APDAQWGASDVVPAAAAAPASNVEWAQE-PVALGAADGWDAAVARPPAP

Q08682 40S ribosomal protein Sa-15.2e-11773.14Show/hide
Query:  MAT--GTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA
        MAT    +  QLSQKEAD++MM AAEVHLGTKNCN+QMERYVFKRRNDGIYI NLGKTW+KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA
Subjt:  MAT--GTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA

Query:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD
        +AIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG KWD
Subjt:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD

Query:  VMVDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAP------LAVDQWA----PDAQWGASDVVPAAAAAPASNVEWAQEPVALGAADGWDAAVARPPAP
        VMVDLFFYREPEE K E+E+   P     A++GA P      +  DQW     PDA W      P +AA  A++  W+ +  A  A  GW+AA     AP
Subjt:  VMVDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAP------LAVDQWA----PDAQWGASDVVPAAAAAPASNVEWAQEPVALGAADGWDAAVARPPAP

Query:  PVEAGAPPA
        P  +GAP A
Subjt:  PVEAGAPPA

Arabidopsis top hitse value%identityAlignment
AT1G72370.1 40s ribosomal protein SA3.7e-11873.14Show/hide
Query:  MAT--GTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA
        MAT    +  QLSQKEAD++MM AAEVHLGTKNCN+QMERYVFKRRNDGIYI NLGKTW+KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA
Subjt:  MAT--GTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA

Query:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD
        +AIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG KWD
Subjt:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD

Query:  VMVDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAP------LAVDQWA----PDAQWGASDVVPAAAAAPASNVEWAQEPVALGAADGWDAAVARPPAP
        VMVDLFFYREPEE K E+E+   P     A++GA P      +  DQW     PDA W      P +AA  A++  W+ +  A  A  GW+AA     AP
Subjt:  VMVDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAP------LAVDQWA----PDAQWGASDVVPAAAAAPASNVEWAQEPVALGAADGWDAAVARPPAP

Query:  PVEAGAPPA
        P  +GAP A
Subjt:  PVEAGAPPA

AT1G72370.2 40s ribosomal protein SA1.1e-11772.82Show/hide
Query:  MAT--GTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA
        MAT    +  QLSQKEAD++MM AAEVHLGTKNCN+QMERYVFKRRNDGIYI NLGKTW+KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA
Subjt:  MAT--GTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA

Query:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD
        +AIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG KWD
Subjt:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD

Query:  VMVDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAP------LAVDQWA----PDAQWGASDVVPAAAAAPASNVEWAQEPVALGAADGWDAAVARPPAP
        VMVDLFFYREPEE K E+E+   P     A++GA P      +  DQW     PDA W      P +AA  A++  W+       A  GW+AA     AP
Subjt:  VMVDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAP------LAVDQWA----PDAQWGASDVVPAAAAAPASNVEWAQEPVALGAADGWDAAVARPPAP

Query:  PVEAGAPPA
        P  +GAP A
Subjt:  PVEAGAPPA

AT3G04770.1 40s ribosomal protein SA B1.8e-10490.91Show/hide
Query:  TAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGR
        TA RQ+S+KEADIQMML+A+VHLGTKNCN+QMERYVFKRR+DGIYIINLGKTWDKLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTG +AIAGR
Subjt:  TAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGR

Query:  HTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVD
        HTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI A  KWDVMV+
Subjt:  HTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVD

AT3G04770.2 40s ribosomal protein SA B4.5e-11676.6Show/hide
Query:  TAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGR
        TA RQ+S+KEADIQMML+A+VHLGTKNCN+QMERYVFKRR+DGIYIINLGKTWDKLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTG +AIAGR
Subjt:  TAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGR

Query:  HTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDLF
        HTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI A  KWDVMVDLF
Subjt:  HTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDLF

Query:  FYREPEEAKEE-EEEAVAPPDYGIADFGAAPLAVDQWA----PDAQWGASDVVPAAAAAPASNVEWAQEPVALGAADGWDAA
        FYREPEEAK+E +EEA    DYG+       +  DQW      DA W + +V    +AAPA         V +  A GW+AA
Subjt:  FYREPEEAKEE-EEEAVAPPDYGIADFGAAPLAVDQWA----PDAQWGASDVVPAAAAAPASNVEWAQEPVALGAADGWDAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTGGAACAGCGCAGCGTCAACTCTCGCAGAAGGAGGCTGACATTCAGATGATGTTAGCCGCCGAGGTTCATCTAGGAACCAAAAATTGCAATTTCCAAATGGA
ACGATACGTTTTCAAGCGCCGGAACGATGGAATATACATTATTAACCTTGGTAAAACATGGGATAAACTTCAGATGGCTGCCAGAGTTATTGTGGCAATTGAGAATCCTC
AGGACATTATTGTTCAGTCTGCCAGGCCTTATGGTCAGAGAGCTGTTTTGAAGTTTGCACAATACACTGGTGCTCATGCTATAGCTGGGAGGCACACCCCTGGAACGTTC
ACCAACCAGCTTCAGACCTCATTCAATGAGCCACGTCTTTTGATACTTACTGATCCTAGAACTGACCATCAGCCCATCAAGGAAGGTGCTCTTGGAAACATTCCTACAAT
TGCTTTTTGCGACACTGATTCGCCAATGCGGTATGTTGATATTGGGATTCCCGCTAATAACAAAGGGAAACATAGCATAGGATGTCTATTCTGGCTTTTGGCGAGGATGG
TTTTGCAGATGCGTGGAACAATCCGTGCTGGGCACAAATGGGATGTGATGGTTGATTTGTTTTTCTATCGGGAGCCTGAGGAGGCTAAGGAGGAAGAAGAAGAGGCTGTT
GCACCCCCTGATTATGGTATTGCAGATTTTGGTGCTGCTCCGCTTGCTGTAGATCAATGGGCTCCTGATGCTCAATGGGGTGCCTCTGATGTGGTTCCAGCTGCTGCTGC
TGCTCCAGCTTCTAATGTTGAATGGGCCCAAGAGCCAGTGGCTTTAGGAGCAGCAGACGGATGGGATGCTGCAGTAGCACGACCACCAGCACCTCCAGTTGAAGCCGGTG
CACCTCCAGCCTCCGATTGCGTTGTCGAGCGTAAGCTGGTTCAGACACTATTTTTATTTGTGTCCTTCCTCGTACACGCCTTGGCGCCGCCTCTCATTGGTGCCCAGATA
TTGGTCCCGCGAGCCGTATTCCCCGATTTTGTGATTGATCTGAAGAAGCAGTACATTCTCTACGCCATCTCCGCTGCGAAGCCGAAGCTGTGTATGCACACCACTTGTTT
GATCTATGGCGTCTCCCTCTTCTCTGCTATGGTATTCTATTCTTACTCTTCTGCTCATGTCGTCTTGGCACTGTGTTCTGACTCTAGGCCTTTGAAGATCGAAGTTGATC
TAATAGATCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACTGGAACAGCGCAGCGTCAACTCTCGCAGAAGGAGGCTGACATTCAGATGATGTTAGCCGCCGAGGTTCATCTAGGAACCAAAAATTGCAATTTCCAAATGGA
ACGATACGTTTTCAAGCGCCGGAACGATGGAATATACATTATTAACCTTGGTAAAACATGGGATAAACTTCAGATGGCTGCCAGAGTTATTGTGGCAATTGAGAATCCTC
AGGACATTATTGTTCAGTCTGCCAGGCCTTATGGTCAGAGAGCTGTTTTGAAGTTTGCACAATACACTGGTGCTCATGCTATAGCTGGGAGGCACACCCCTGGAACGTTC
ACCAACCAGCTTCAGACCTCATTCAATGAGCCACGTCTTTTGATACTTACTGATCCTAGAACTGACCATCAGCCCATCAAGGAAGGTGCTCTTGGAAACATTCCTACAAT
TGCTTTTTGCGACACTGATTCGCCAATGCGGTATGTTGATATTGGGATTCCCGCTAATAACAAAGGGAAACATAGCATAGGATGTCTATTCTGGCTTTTGGCGAGGATGG
TTTTGCAGATGCGTGGAACAATCCGTGCTGGGCACAAATGGGATGTGATGGTTGATTTGTTTTTCTATCGGGAGCCTGAGGAGGCTAAGGAGGAAGAAGAAGAGGCTGTT
GCACCCCCTGATTATGGTATTGCAGATTTTGGTGCTGCTCCGCTTGCTGTAGATCAATGGGCTCCTGATGCTCAATGGGGTGCCTCTGATGTGGTTCCAGCTGCTGCTGC
TGCTCCAGCTTCTAATGTTGAATGGGCCCAAGAGCCAGTGGCTTTAGGAGCAGCAGACGGATGGGATGCTGCAGTAGCACGACCACCAGCACCTCCAGTTGAAGCCGGTG
CACCTCCAGCCTCCGATTGCGTTGTCGAGCGTAAGCTGGTTCAGACACTATTTTTATTTGTGTCCTTCCTCGTACACGCCTTGGCGCCGCCTCTCATTGGTGCCCAGATA
TTGGTCCCGCGAGCCGTATTCCCCGATTTTGTGATTGATCTGAAGAAGCAGTACATTCTCTACGCCATCTCCGCTGCGAAGCCGAAGCTGTGTATGCACACCACTTGTTT
GATCTATGGCGTCTCCCTCTTCTCTGCTATGGTATTCTATTCTTACTCTTCTGCTCATGTCGTCTTGGCACTGTGTTCTGACTCTAGGCCTTTGAAGATCGAAGTTGATC
TAATAGATCTTTGA
Protein sequenceShow/hide protein sequence
MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTF
TNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEEEEEAV
APPDYGIADFGAAPLAVDQWAPDAQWGASDVVPAAAAAPASNVEWAQEPVALGAADGWDAAVARPPAPPVEAGAPPASDCVVERKLVQTLFLFVSFLVHALAPPLIGAQI
LVPRAVFPDFVIDLKKQYILYAISAAKPKLCMHTTCLIYGVSLFSAMVFYSYSSAHVVLALCSDSRPLKIEVDLIDL