; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc10g07970 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g07970
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description40S ribosomal protein S10-1-like
Genome locationchr10:5830988..5836045
RNA-Seq ExpressionMoc10g07970
SyntenyMoc10g07970
Gene Ontology termsGO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005326 - Plectin/S10, N-terminal
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR037447 - 40S Ribosomal protein S10


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK16623.1 40S ribosomal protein S10-1-like [Cucumis melo var. makuwa]3.2e-9197.24Show/hide
Query:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
        IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
Subjt:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP

Query:  FGGPPGDRPRGPPRFE-GERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA-SPNLP
        FGGPPGDRPRGPPRFE GERRFGDRDGYRGGPRGPGG+FGGDKGGAPADYRPSFGGPGGRPGFGRGAG YGGGAA S NLP
Subjt:  FGGPPGDRPRGPPRFE-GERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA-SPNLP

XP_004146529.1 40S ribosomal protein S10-1 [Cucumis sativus]1.1e-9197.79Show/hide
Query:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
        IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
Subjt:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP

Query:  FGGPPGDRPRGPPRFE-GERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA-SPNLP
        FGGPPGDRPRGPPRFE GERRFGDRDGYRGGPRGPGG+FGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA S NLP
Subjt:  FGGPPGDRPRGPPRFE-GERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA-SPNLP

XP_008452010.1 PREDICTED: 40S ribosomal protein S10-1-like [Cucumis melo]3.2e-9197.24Show/hide
Query:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
        IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
Subjt:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP

Query:  FGGPPGDRPRGPPRFE-GERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA-SPNLP
        FGGPPGDRPRGPPRFE GERRFGDRDGYRGGPRGPGG+FGGDKGGAPADYRPSFGGPGGRPGFGRGAG YGGGAA S NLP
Subjt:  FGGPPGDRPRGPPRFE-GERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA-SPNLP

XP_022136909.1 40S ribosomal protein S10-1-like [Momordica charantia]7.5e-96100Show/hide
Query:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
        IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
Subjt:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP

Query:  FGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAASPNLP
        FGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAASPNLP
Subjt:  FGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAASPNLP

XP_022982956.1 40S ribosomal protein S10-1-like [Cucurbita maxima]5.5e-9197.24Show/hide
Query:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
        IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
Subjt:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP

Query:  FGGPPGDRPRGPPRFE-GERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGA-ASPNLP
        FGGPPGDRPRGPPRFE GERRFGDRDGYRGGPRGP G+FGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGA AS NLP
Subjt:  FGGPPGDRPRGPPRFE-GERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGA-ASPNLP

TrEMBL top hitse value%identityAlignment
A0A0A0KUQ3 S10_plectin domain-containing protein5.4e-9297.79Show/hide
Query:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
        IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
Subjt:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP

Query:  FGGPPGDRPRGPPRFE-GERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA-SPNLP
        FGGPPGDRPRGPPRFE GERRFGDRDGYRGGPRGPGG+FGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA S NLP
Subjt:  FGGPPGDRPRGPPRFE-GERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA-SPNLP

A0A1S3BST3 40S ribosomal protein S10-1-like1.6e-9197.24Show/hide
Query:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
        IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
Subjt:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP

Query:  FGGPPGDRPRGPPRFE-GERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA-SPNLP
        FGGPPGDRPRGPPRFE GERRFGDRDGYRGGPRGPGG+FGGDKGGAPADYRPSFGGPGGRPGFGRGAG YGGGAA S NLP
Subjt:  FGGPPGDRPRGPPRFE-GERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA-SPNLP

A0A5D3CXK7 40S ribosomal protein S10-1-like1.6e-9197.24Show/hide
Query:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
        IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
Subjt:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP

Query:  FGGPPGDRPRGPPRFE-GERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA-SPNLP
        FGGPPGDRPRGPPRFE GERRFGDRDGYRGGPRGPGG+FGGDKGGAPADYRPSFGGPGGRPGFGRGAG YGGGAA S NLP
Subjt:  FGGPPGDRPRGPPRFE-GERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA-SPNLP

A0A6J1C5N2 40S ribosomal protein S10-1-like3.6e-96100Show/hide
Query:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
        IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
Subjt:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP

Query:  FGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAASPNLP
        FGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAASPNLP
Subjt:  FGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAASPNLP

A0A6J1JA51 40S ribosomal protein S10-1-like2.7e-9197.24Show/hide
Query:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
        IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
Subjt:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP

Query:  FGGPPGDRPRGPPRFE-GERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGG-AASPNLP
        FGGPPGDRPRGPPRFE GERRFGDRDGYRGGPRGP G+FGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGG AAS NLP
Subjt:  FGGPPGDRPRGPPRFE-GERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGG-AASPNLP

SwissProt top hitse value%identityAlignment
P0DKK8 40S ribosomal protein S10-13.7e-7480.11Show/hide
Query:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
        II +KNR EI KYLFQEGV YAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETF+W +YYWYLTNDGIE LR YLNLPSEIVPATLKK A+P GRP
Subjt:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP

Query:  FG-GPPGDRPRGPPRFEGER-RFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGR-GAGSYGGGAASPNL
        FG GPPGDRPRGPPRFEG+R RFGDRDGYRGGPRG  GDFGG+KGGAPA+++PSF   GGRPGFGR G G +G G  S ++
Subjt:  FG-GPPGDRPRGPPRFEGER-RFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGR-GAGSYGGGAASPNL

P0DKK9 40S ribosomal protein S10-23.7e-7480.11Show/hide
Query:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
        II +KNR EI KYLFQEGV YAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETF+W +YYWYLTNDGIE LR YLNLPSEIVPATLKK A+P GRP
Subjt:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP

Query:  FG-GPPGDRPRGPPRFEGER-RFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGR-GAGSYGGGAASPNL
        FG GPPGDRPRGPPRFEG+R RFGDRDGYRGGPRG  GDFGG+KGGAPA+++PSF   GGRPGFGR G G +G G  S ++
Subjt:  FG-GPPGDRPRGPPRFEGER-RFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGR-GAGSYGGGAASPNL

Q9FFS8 40S ribosomal protein S10-29.5e-7079.67Show/hide
Query:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        IISE NRREISKYLF+EGV +AKKD+NL +HP I+ VPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GR
Subjt:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAASPNLP
        PFGG  GDRPRGPPR +GERRFGDRDGYRGGP+  GG++ GDK GAPADY+P F GG GG R GFGRGAG +GGGAA  +LP
Subjt:  PFGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAASPNLP

Q9LTF2 40S ribosomal protein S10-37.3e-7079.55Show/hide
Query:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
        IISE NR+EI KYLF+EGVC+AKKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRP
Subjt:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP

Query:  FGGPPGDRPRGPPRFEGER-RFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAS
        FGGPPGDR RGP    G+R RFGDRDGYR GPR  GG+FGG+KGGAPADY+PSF G G   GFGRGAG Y   A S
Subjt:  FGGPPGDRPRGPPRFEGER-RFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAS

Q9SW09 40S ribosomal protein S10-13.2e-7380.68Show/hide
Query:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
        IISE NRREI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRP
Subjt:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP

Query:  FGGPPGDRPRGPPRFEGER-RFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAS
        FGGPPGDR RGPPR +G+R RFGDRDGYRGGPRG     G +KGGAPAD++PSF G GGRPGFGRGAG Y   A S
Subjt:  FGGPPGDRPRGPPRFEGER-RFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAS

Arabidopsis top hitse value%identityAlignment
AT4G25740.1 RNA binding Plectin/S10 domain-containing protein2.3e-7480.68Show/hide
Query:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
        IISE NRREI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRP
Subjt:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP

Query:  FGGPPGDRPRGPPRFEGER-RFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAS
        FGGPPGDR RGPPR +G+R RFGDRDGYRGGPRG     G +KGGAPAD++PSF G GGRPGFGRGAG Y   A S
Subjt:  FGGPPGDRPRGPPRFEGER-RFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAS

AT4G25740.2 RNA binding Plectin/S10 domain-containing protein5.0e-5867.43Show/hide
Query:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
        IISE NRREI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRP
Subjt:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP

Query:  FGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAS
        FGGP G                                G +KGGAPAD++PSF G GGRPGFGRGAG Y   A S
Subjt:  FGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAS

AT5G41520.1 RNA binding Plectin/S10 domain-containing protein6.8e-7179.67Show/hide
Query:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        IISE NRREISKYLF+EGV +AKKD+NL +HP I+ VPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GR
Subjt:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAASPNLP
        PFGG  GDRPRGPPR +GERRFGDRDGYRGGP+  GG++ GDK GAPADY+P F GG GG R GFGRGAG +GGGAA  +LP
Subjt:  PFGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAASPNLP

AT5G41520.2 RNA binding Plectin/S10 domain-containing protein2.1e-5180.29Show/hide
Query:  MQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGGDKGG
        MQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GRPFGG  GDRPRGPPR +GERRFGDRDGYRGGP+  GG++ GDK G
Subjt:  MQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGGDKGG

Query:  APADYRPSF-GGPGG-RPGFGRGAGSYGGGAASPNLP
        APADY+P F GG GG R GFGRGAG +GGGAA  +LP
Subjt:  APADYRPSF-GGPGG-RPGFGRGAGSYGGGAASPNLP

AT5G52650.1 RNA binding Plectin/S10 domain-containing protein5.2e-7179.55Show/hide
Query:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
        IISE NR+EI KYLF+EGVC+AKKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRP
Subjt:  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP

Query:  FGGPPGDRPRGPPRFEGER-RFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAS
        FGGPPGDR RGP    G+R RFGDRDGYR GPR  GG+FGG+KGGAPADY+PSF G G   GFGRGAG Y   A S
Subjt:  FGGPPGDRPRGPPRFEGER-RFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACAACAGTGTATTTCAGATTGCAGCTCGAACTCGGCCTCCGGACCGATCTGAATACTTGGGCGAACCTGCACAAAAAGGTGAGCACTCCGACGATCAAATT
ATTTCAGAGAAGAACCGTAGGGAGATCTCCAAGTATCTCTTTCAAGAGGGAGTCTGTTATGCCAAGAAGGACTACAATTTGGCCAAGCACCCAGAAATCGATGTG
CCTAATTTGCAGGTTATAAAGTTGATGCAGAGCTTCAAGTCCAAGGAATATGTTCGCGAGACATTTGCTTGGATGCATTACTACTGGTACCTCACCAATGATGGC
ATTGAGTTCCTCCGGACTTACCTCAATCTTCCTTCTGAAATTGTCCCTGCAACCTTGAAAAAACAAGCCAAGCCAGCTGGTAGGCCCTTTGGCGGACCACCTGGC
GATCGCCCACGGGGTCCACCACGTTTTGAGGGCGAGCGGAGGTTTGGTGACCGGGATGGCTACCGTGGAGGTCCTCGTGGACCTGGTGGTGATTTTGGTGGTGAC
AAGGGTGGAGCACCTGCAGACTACAGGCCTTCTTTTGGGGGTCCTGGTGGAAGGCCGGGCTTTGGCCGTGGGGCTGGTAGCTATGGTGGAGGAGCTGCAAGCCCA
AACCTTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCACAACAGTGTATTTCAGATTGCAGCTCGAACTCGGCCTCCGGACCGATCTGAATACTTGGGCGAACCTGCACAAAAAGGTGAGCACTCCGACGATCAAATT
ATTTCAGAGAAGAACCGTAGGGAGATCTCCAAGTATCTCTTTCAAGAGGGAGTCTGTTATGCCAAGAAGGACTACAATTTGGCCAAGCACCCAGAAATCGATGTG
CCTAATTTGCAGGTTATAAAGTTGATGCAGAGCTTCAAGTCCAAGGAATATGTTCGCGAGACATTTGCTTGGATGCATTACTACTGGTACCTCACCAATGATGGC
ATTGAGTTCCTCCGGACTTACCTCAATCTTCCTTCTGAAATTGTCCCTGCAACCTTGAAAAAACAAGCCAAGCCAGCTGGTAGGCCCTTTGGCGGACCACCTGGC
GATCGCCCACGGGGTCCACCACGTTTTGAGGGCGAGCGGAGGTTTGGTGACCGGGATGGCTACCGTGGAGGTCCTCGTGGACCTGGTGGTGATTTTGGTGGTGAC
AAGGGTGGAGCACCTGCAGACTACAGGCCTTCTTTTGGGGGTCCTGGTGGAAGGCCGGGCTTTGGCCGTGGGGCTGGTAGCTATGGTGGAGGAGCTGCAAGCCCA
AACCTTCCTTGA
Protein sequenceShow/hide protein sequence
MHNSVFQIAARTRPPDRSEYLGEPAQKGEHSDDQIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDG
IEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAASP
NLP