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Moc10g09090 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g09090
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionSWIB domain-containing protein
Genome locationchr10:6719620..6721500
RNA-Seq ExpressionMoc10g09090
SyntenyMoc10g09090
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR003121 - SWIB/MDM2 domain
IPR036885 - SWIB/MDM2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE9606954.1 putative transcription regulator SWI/SNF-BAF60b family [Lupinus albus]3.0e-1653.09Show/hide
Query:  SKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEVNKILSPQFNDSSL
        SK  +   +LCKF+GIP  S R +I ++ISKFLKLY  +SPG++KD+IWE+NL+ +L GK+ +G PEV KILSP+F+  ++
Subjt:  SKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEVNKILSPQFNDSSL

KAE9613207.1 putative transcription regulator SWI/SNF-BAF60b family [Lupinus albus]3.0e-1653.09Show/hide
Query:  SKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEVNKILSPQFNDSSL
        SK  +   +LCKF+GIP  S R +I ++ISKFLKLY  +SPG++KD+IWE+NL+ +L GK+ +G PEV KILSP+F+  ++
Subjt:  SKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEVNKILSPQFNDSSL

KAG6577105.1 hypothetical protein SDJN03_24679, partial [Cucurbita argyrosperma subsp. sororia]9.4e-1869.01Show/hide
Query:  PAKITVAAHIL-SKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCG
        P  IT+   ++ +KK+Q KPQLCKFLGIPLV+PRGDIPILI+KFLK YQ QSPG+ KD  WEENLKA L G
Subjt:  PAKITVAAHIL-SKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCG

KAG7015106.1 hypothetical protein SDJN02_22739 [Cucurbita argyrosperma subsp. argyrosperma]3.7e-2275Show/hide
Query:  MAPAKITVAAHILSKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCG
        MAPAKI+V A +LS+K+Q KPQLCKFLGIPL++PRGDIPILI+KFLK YQ QSPG+ KD  WEENLKA L G
Subjt:  MAPAKITVAAHILSKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCG

XP_022136393.1 uncharacterized protein LOC111008113 [Momordica charantia]9.6e-55100Show/hide
Query:  MAPAKITVAAHILSKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEVNKILSPQFNDSSLRNMEME
        MAPAKITVAAHILSKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEVNKILSPQFNDSSLRNMEME
Subjt:  MAPAKITVAAHILSKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEVNKILSPQFNDSSLRNMEME

Query:  RQKDIRHDRR
        RQKDIRHDRR
Subjt:  RQKDIRHDRR

TrEMBL top hitse value%identityAlignment
A0A4P1QT43 SWIB domain-containing protein1.9e-1651.76Show/hide
Query:  SKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEVNKILSPQFNDSSLRNME
        SK  +   +LCKF+GIP  S R +I ++ISKFLKLY  +SPG++KD+IWE+NL+ +L GK+ +G PEV KILSP+F+  ++   E
Subjt:  SKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEVNKILSPQFNDSSLRNME

A0A4P1RHA4 SWIB domain-containing protein1.5e-1653.09Show/hide
Query:  SKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEVNKILSPQFNDSSL
        SK  +   +LCKF+GIP  S R +I ++ISKFLKLY  +SPG++KD+IWE+NL+ +L GK+ +G PEV KILSP+F+  ++
Subjt:  SKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEVNKILSPQFNDSSL

A0A6A4Q0B8 Putative transcription regulator SWI/SNF-BAF60b family1.5e-1653.09Show/hide
Query:  SKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEVNKILSPQFNDSSL
        SK  +   +LCKF+GIP  S R +I ++ISKFLKLY  +SPG++KD+IWE+NL+ +L GK+ +G PEV KILSP+F+  ++
Subjt:  SKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEVNKILSPQFNDSSL

A0A6A5MEA5 Putative transcription regulator SWI/SNF-BAF60b family1.5e-1653.09Show/hide
Query:  SKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEVNKILSPQFNDSSL
        SK  +   +LCKF+GIP  S R +I ++ISKFLKLY  +SPG++KD+IWE+NL+ +L GK+ +G PEV KILSP+F+  ++
Subjt:  SKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEVNKILSPQFNDSSL

A0A6J1C7G5 uncharacterized protein LOC1110081134.6e-55100Show/hide
Query:  MAPAKITVAAHILSKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEVNKILSPQFNDSSLRNMEME
        MAPAKITVAAHILSKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEVNKILSPQFNDSSLRNMEME
Subjt:  MAPAKITVAAHILSKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEVNKILSPQFNDSSLRNMEME

Query:  RQKDIRHDRR
        RQKDIRHDRR
Subjt:  RQKDIRHDRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G17510.1 unknown protein8.2e-0438.33Show/hide
Query:  FLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEVNKIL
        FLGIP +  R +  +L+SK++++ Q +    +K    EE LK +L G+D VG+ E  K+L
Subjt:  FLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEVNKIL

AT1G31760.1 SWIB/MDM2 domain superfamily protein2.0e-0536.62Show/hide
Query:  QLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEVNKILSPQFNDS
        QL  F G   ++ RG     + +++KL+  Q+P  +K+   ++ LK I  GKD VG+ E+ K+LSP F  S
Subjt:  QLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEVNKILSPQFNDS

AT2G35605.1 SWIB/MDM2 domain superfamily protein2.8e-0438.46Show/hide
Query:  ISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEVNKILSPQFNDSS
        I +++KL   Q+P  +++ + +E LK I  GKD VG  E++K+LS  F  S+
Subjt:  ISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEVNKILSPQFNDSS

AT3G03590.1 SWIB/MDM2 domain superfamily protein1.8e-0636.36Show/hide
Query:  APAKITVAAHILSKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEVNKILSPQF
        +PAK T  +  + K     P L +FLG    S R D    I  ++K +  Q+P  +++   +E LK I  GKD VG  E++K+LSP F
Subjt:  APAKITVAAHILSKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEVNKILSPQF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCCGCCAAGATTACTGTCGCCGCTCATATTCTCAGCAAGAAACTTCAATTCAAACCTCAGCTCTGCAAGTTCCTCGGCATTCCTCTCGTTTCTCCCCGC
GGCGATATTCCCATCCTAATCTCCAAGTTCCTCAAGCTCTATCAACCTCAGAGCCCTGGACTCAGAAAGGACAGGATCTGGGAGGAGAACTTGAAAGCCATATTA
TGCGGAAAAGACGGAGTTGGGATGCCAGAGGTTAACAAAATACTCTCTCCGCAATTCAATGATTCAAGTCTAAGAAATATGGAAATGGAACGTCAAAAAGATATC
AGGCATGACAGAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCCGCCAAGATTACTGTCGCCGCTCATATTCTCAGCAAGAAACTTCAATTCAAACCTCAGCTCTGCAAGTTCCTCGGCATTCCTCTCGTTTCTCCCCGC
GGCGATATTCCCATCCTAATCTCCAAGTTCCTCAAGCTCTATCAACCTCAGAGCCCTGGACTCAGAAAGGACAGGATCTGGGAGGAGAACTTGAAAGCCATATTA
TGCGGAAAAGACGGAGTTGGGATGCCAGAGGTTAACAAAATACTCTCTCCGCAATTCAATGATTCAAGTCTAAGAAATATGGAAATGGAACGTCAAAAAGATATC
AGGCATGACAGAAGATGA
Protein sequenceShow/hide protein sequence
MAPAKITVAAHILSKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEVNKILSPQFNDSSLRNMEMERQKDI
RHDRR