; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc10g09200 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g09200
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionTransposon Ty3-G Gag-Pol polyprotein
Genome locationchr10:6810974..6811714
RNA-Seq ExpressionMoc10g09200
SyntenyMoc10g09200
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045000.1 uncharacterized protein E6C27_scaffold74G003100 [Cucumis melo var. makuwa]7.1e-5854.34Show/hide
Query:  SKVKTNKNPPIAIKEAADQGDVYNNISNLVTEMRIVANRQIDMEHRSKINDFFVCEPPCFGQETDPYAAKYWILKLETIFDCIDCSDEQRVSFAVLKLND
        S VKTN N  +A + + + G+VY+ I NLV+E+RI+A +Q D E  +K + FF CEPP FG++TDP  A+ WIL LE IFD I CSD+Q+VSFA L+L D
Subjt:  SKVKTNKNPPIAIKEAADQGDVYNNISNLVTEMRIVANRQIDMEHRSKINDFFVCEPPCFGQETDPYAAKYWILKLETIFDCIDCSDEQRVSFAVLKLND

Query:  SALSWWIVAERHLK-DEVTVTWEKFKELFFMRYFPRWMQHQKYAELCSLEQGDRTVAEYDVEFIKLCSLVYDFIGSEAWETSLH------DIRIQICLLR
        +A SWW+V    L+ D VTVTWEK KELF  RY PRW++ +K+ ELC+LEQGD TVAEYD +FIKL SL ++FI  EAWE  L       DIR QIC   
Subjt:  SALSWWIVAERHLK-DEVTVTWEKFKELFFMRYFPRWMQHQKYAELCSLEQGDRTVAEYDVEFIKLCSLVYDFIGSEAWETSLH------DIRIQICLLR

Query:  DTTYPQVRDMALNLERRLN
        + +Y +VR++AL  E+R+N
Subjt:  DTTYPQVRDMALNLERRLN

TYK16471.1 uncharacterized protein E5676_scaffold21G002740 [Cucumis melo var. makuwa]1.4e-5854.79Show/hide
Query:  SKVKTNKNPPIAIKEAADQGDVYNNISNLVTEMRIVANRQIDMEHRSKINDFFVCEPPCFGQETDPYAAKYWILKLETIFDCIDCSDEQRVSFAVLKLND
        S VKTN N  +A + + + G+VY+ I NLV+E+RI+A +Q D E  +K + FF CEPP FG++TDP  A+ WIL LE IFD I CSD+Q+VSFA L+L D
Subjt:  SKVKTNKNPPIAIKEAADQGDVYNNISNLVTEMRIVANRQIDMEHRSKINDFFVCEPPCFGQETDPYAAKYWILKLETIFDCIDCSDEQRVSFAVLKLND

Query:  SALSWWIVAERHLK-DEVTVTWEKFKELFFMRYFPRWMQHQKYAELCSLEQGDRTVAEYDVEFIKLCSLVYDFIGSEAWETSLH------DIRIQICLLR
        +A SWW+V    L+ D VTVTWEKFKELF  RY PRW++ +K+ ELC+LEQGD TVAEYD +FIKL SL ++FI  EAWE  L       DIR QIC   
Subjt:  SALSWWIVAERHLK-DEVTVTWEKFKELFFMRYFPRWMQHQKYAELCSLEQGDRTVAEYDVEFIKLCSLVYDFIGSEAWETSLH------DIRIQICLLR

Query:  DTTYPQVRDMALNLERRLN
        + +Y +VR++AL  E+R+N
Subjt:  DTTYPQVRDMALNLERRLN

XP_004147729.1 uncharacterized protein LOC101209793 [Cucumis sativus]2.7e-5753.42Show/hide
Query:  SKVKTNKNPPIAIKEAADQGDVYNNISNLVTEMRIVANRQIDMEHRSKINDFFVCEPPCFGQETDPYAAKYWILKLETIFDCIDCSDEQRVSFAVLKLND
        S VKTN +  +A + + + G+VY+ I NLV+EMRI+A +Q D E  +K + FF CEPP FG++TDP  A+ WIL LE IFD I CSDE +VSFA L+L D
Subjt:  SKVKTNKNPPIAIKEAADQGDVYNNISNLVTEMRIVANRQIDMEHRSKINDFFVCEPPCFGQETDPYAAKYWILKLETIFDCIDCSDEQRVSFAVLKLND

Query:  SALSWWIVAERHLK-DEVTVTWEKFKELFFMRYFPRWMQHQKYAELCSLEQGDRTVAEYDVEFIKLCSLVYDFIGSEAWETSLH------DIRIQICLLR
        +A SWW+V    L+ D VTVTW+KFKELF  RY P W++ +K+ ELC+LEQGD TVAEYD +FIKL SL ++FI  EAWE  L       DIR Q+CLL 
Subjt:  SALSWWIVAERHLK-DEVTVTWEKFKELFFMRYFPRWMQHQKYAELCSLEQGDRTVAEYDVEFIKLCSLVYDFIGSEAWETSLH------DIRIQICLLR

Query:  DTTYPQVRDMALNLERRLN
        + +  ++R++AL +E+R+N
Subjt:  DTTYPQVRDMALNLERRLN

XP_022136421.1 uncharacterized protein LOC111008132 [Momordica charantia]2.2e-139100Show/hide
Query:  MAESKVKTIKNPPVAIKLEAAERGDVAESKVKTNKNPPIAIKEAADQGDVYNNISNLVTEMRIVANRQIDMEHRSKINDFFVCEPPCFGQETDPYAAKYW
        MAESKVKTIKNPPVAIKLEAAERGDVAESKVKTNKNPPIAIKEAADQGDVYNNISNLVTEMRIVANRQIDMEHRSKINDFFVCEPPCFGQETDPYAAKYW
Subjt:  MAESKVKTIKNPPVAIKLEAAERGDVAESKVKTNKNPPIAIKEAADQGDVYNNISNLVTEMRIVANRQIDMEHRSKINDFFVCEPPCFGQETDPYAAKYW

Query:  ILKLETIFDCIDCSDEQRVSFAVLKLNDSALSWWIVAERHLKDEVTVTWEKFKELFFMRYFPRWMQHQKYAELCSLEQGDRTVAEYDVEFIKLCSLVYDF
        ILKLETIFDCIDCSDEQRVSFAVLKLNDSALSWWIVAERHLKDEVTVTWEKFKELFFMRYFPRWMQHQKYAELCSLEQGDRTVAEYDVEFIKLCSLVYDF
Subjt:  ILKLETIFDCIDCSDEQRVSFAVLKLNDSALSWWIVAERHLKDEVTVTWEKFKELFFMRYFPRWMQHQKYAELCSLEQGDRTVAEYDVEFIKLCSLVYDF

Query:  IGSEAWETSLHDIRIQICLLRDTTYPQVRDMALNLERRLNAQEDQD
        IGSEAWETSLHDIRIQICLLRDTTYPQVRDMALNLERRLNAQEDQD
Subjt:  IGSEAWETSLHDIRIQICLLRDTTYPQVRDMALNLERRLNAQEDQD

XP_022931358.1 uncharacterized protein LOC111437567 isoform X1 [Cucurbita moschata]1.3e-5452.04Show/hide
Query:  VKTNKNPPIAIKEAADQGDVYNNISNLVTE-MRIVANRQIDMEHRSKINDFFVCEPPCFGQETDPYAAKYWILKLETIFDCIDCSDEQRVSFAVLKLNDS
        +KTN+ P IA + A + GDV + I +L+ E +R+VA RQ + EH SK N FFVC+PP FG++TDP  AK W+L LE IFDCI CSDEQ+VSFA L+L DS
Subjt:  VKTNKNPPIAIKEAADQGDVYNNISNLVTE-MRIVANRQIDMEHRSKINDFFVCEPPCFGQETDPYAAKYWILKLETIFDCIDCSDEQRVSFAVLKLNDS

Query:  ALSWWIVAERHLK-DEVTVTWEKFKELFFMRYFPRWMQHQKYAELCSLEQGDRTVAEYDVEFIKLCSLVYDFIGSEAWETSLH------DIRIQICLLRD
        ALSWWIV++R+L  D   VTWEKFK+LF+ RYFP W++H+K+ EL  L QG+RTV EYD EFI L SLV +    ++ E  L       DI  Q+C   +
Subjt:  ALSWWIVAERHLK-DEVTVTWEKFKELFFMRYFPRWMQHQKYAELCSLEQGDRTVAEYDVEFIKLCSLVYDFIGSEAWETSLH------DIRIQICLLRD

Query:  TTYPQVRDMALNLERRLNAQE
         +Y  +R+ AL +E+ LN ++
Subjt:  TTYPQVRDMALNLERRLNAQE

TrEMBL top hitse value%identityAlignment
A0A0A0L042 Retrotrans_gag domain-containing protein1.3e-5753.42Show/hide
Query:  SKVKTNKNPPIAIKEAADQGDVYNNISNLVTEMRIVANRQIDMEHRSKINDFFVCEPPCFGQETDPYAAKYWILKLETIFDCIDCSDEQRVSFAVLKLND
        S VKTN +  +A + + + G+VY+ I NLV+EMRI+A +Q D E  +K + FF CEPP FG++TDP  A+ WIL LE IFD I CSDE +VSFA L+L D
Subjt:  SKVKTNKNPPIAIKEAADQGDVYNNISNLVTEMRIVANRQIDMEHRSKINDFFVCEPPCFGQETDPYAAKYWILKLETIFDCIDCSDEQRVSFAVLKLND

Query:  SALSWWIVAERHLK-DEVTVTWEKFKELFFMRYFPRWMQHQKYAELCSLEQGDRTVAEYDVEFIKLCSLVYDFIGSEAWETSLH------DIRIQICLLR
        +A SWW+V    L+ D VTVTW+KFKELF  RY P W++ +K+ ELC+LEQGD TVAEYD +FIKL SL ++FI  EAWE  L       DIR Q+CLL 
Subjt:  SALSWWIVAERHLK-DEVTVTWEKFKELFFMRYFPRWMQHQKYAELCSLEQGDRTVAEYDVEFIKLCSLVYDFIGSEAWETSLH------DIRIQICLLR

Query:  DTTYPQVRDMALNLERRLN
        + +  ++R++AL +E+R+N
Subjt:  DTTYPQVRDMALNLERRLN

A0A5A7TP79 Retrotrans_gag domain-containing protein3.5e-5854.34Show/hide
Query:  SKVKTNKNPPIAIKEAADQGDVYNNISNLVTEMRIVANRQIDMEHRSKINDFFVCEPPCFGQETDPYAAKYWILKLETIFDCIDCSDEQRVSFAVLKLND
        S VKTN N  +A + + + G+VY+ I NLV+E+RI+A +Q D E  +K + FF CEPP FG++TDP  A+ WIL LE IFD I CSD+Q+VSFA L+L D
Subjt:  SKVKTNKNPPIAIKEAADQGDVYNNISNLVTEMRIVANRQIDMEHRSKINDFFVCEPPCFGQETDPYAAKYWILKLETIFDCIDCSDEQRVSFAVLKLND

Query:  SALSWWIVAERHLK-DEVTVTWEKFKELFFMRYFPRWMQHQKYAELCSLEQGDRTVAEYDVEFIKLCSLVYDFIGSEAWETSLH------DIRIQICLLR
        +A SWW+V    L+ D VTVTWEK KELF  RY PRW++ +K+ ELC+LEQGD TVAEYD +FIKL SL ++FI  EAWE  L       DIR QIC   
Subjt:  SALSWWIVAERHLK-DEVTVTWEKFKELFFMRYFPRWMQHQKYAELCSLEQGDRTVAEYDVEFIKLCSLVYDFIGSEAWETSLH------DIRIQICLLR

Query:  DTTYPQVRDMALNLERRLN
        + +Y +VR++AL  E+R+N
Subjt:  DTTYPQVRDMALNLERRLN

A0A5D3CX20 Retrotrans_gag domain-containing protein7.0e-5954.79Show/hide
Query:  SKVKTNKNPPIAIKEAADQGDVYNNISNLVTEMRIVANRQIDMEHRSKINDFFVCEPPCFGQETDPYAAKYWILKLETIFDCIDCSDEQRVSFAVLKLND
        S VKTN N  +A + + + G+VY+ I NLV+E+RI+A +Q D E  +K + FF CEPP FG++TDP  A+ WIL LE IFD I CSD+Q+VSFA L+L D
Subjt:  SKVKTNKNPPIAIKEAADQGDVYNNISNLVTEMRIVANRQIDMEHRSKINDFFVCEPPCFGQETDPYAAKYWILKLETIFDCIDCSDEQRVSFAVLKLND

Query:  SALSWWIVAERHLK-DEVTVTWEKFKELFFMRYFPRWMQHQKYAELCSLEQGDRTVAEYDVEFIKLCSLVYDFIGSEAWETSLH------DIRIQICLLR
        +A SWW+V    L+ D VTVTWEKFKELF  RY PRW++ +K+ ELC+LEQGD TVAEYD +FIKL SL ++FI  EAWE  L       DIR QIC   
Subjt:  SALSWWIVAERHLK-DEVTVTWEKFKELFFMRYFPRWMQHQKYAELCSLEQGDRTVAEYDVEFIKLCSLVYDFIGSEAWETSLH------DIRIQICLLR

Query:  DTTYPQVRDMALNLERRLN
        + +Y +VR++AL  E+R+N
Subjt:  DTTYPQVRDMALNLERRLN

A0A6J1C495 uncharacterized protein LOC1110081321.0e-139100Show/hide
Query:  MAESKVKTIKNPPVAIKLEAAERGDVAESKVKTNKNPPIAIKEAADQGDVYNNISNLVTEMRIVANRQIDMEHRSKINDFFVCEPPCFGQETDPYAAKYW
        MAESKVKTIKNPPVAIKLEAAERGDVAESKVKTNKNPPIAIKEAADQGDVYNNISNLVTEMRIVANRQIDMEHRSKINDFFVCEPPCFGQETDPYAAKYW
Subjt:  MAESKVKTIKNPPVAIKLEAAERGDVAESKVKTNKNPPIAIKEAADQGDVYNNISNLVTEMRIVANRQIDMEHRSKINDFFVCEPPCFGQETDPYAAKYW

Query:  ILKLETIFDCIDCSDEQRVSFAVLKLNDSALSWWIVAERHLKDEVTVTWEKFKELFFMRYFPRWMQHQKYAELCSLEQGDRTVAEYDVEFIKLCSLVYDF
        ILKLETIFDCIDCSDEQRVSFAVLKLNDSALSWWIVAERHLKDEVTVTWEKFKELFFMRYFPRWMQHQKYAELCSLEQGDRTVAEYDVEFIKLCSLVYDF
Subjt:  ILKLETIFDCIDCSDEQRVSFAVLKLNDSALSWWIVAERHLKDEVTVTWEKFKELFFMRYFPRWMQHQKYAELCSLEQGDRTVAEYDVEFIKLCSLVYDF

Query:  IGSEAWETSLHDIRIQICLLRDTTYPQVRDMALNLERRLNAQEDQD
        IGSEAWETSLHDIRIQICLLRDTTYPQVRDMALNLERRLNAQEDQD
Subjt:  IGSEAWETSLHDIRIQICLLRDTTYPQVRDMALNLERRLNAQEDQD

A0A6J1EYB6 uncharacterized protein LOC111437567 isoform X16.1e-5552.04Show/hide
Query:  VKTNKNPPIAIKEAADQGDVYNNISNLVTE-MRIVANRQIDMEHRSKINDFFVCEPPCFGQETDPYAAKYWILKLETIFDCIDCSDEQRVSFAVLKLNDS
        +KTN+ P IA + A + GDV + I +L+ E +R+VA RQ + EH SK N FFVC+PP FG++TDP  AK W+L LE IFDCI CSDEQ+VSFA L+L DS
Subjt:  VKTNKNPPIAIKEAADQGDVYNNISNLVTE-MRIVANRQIDMEHRSKINDFFVCEPPCFGQETDPYAAKYWILKLETIFDCIDCSDEQRVSFAVLKLNDS

Query:  ALSWWIVAERHLK-DEVTVTWEKFKELFFMRYFPRWMQHQKYAELCSLEQGDRTVAEYDVEFIKLCSLVYDFIGSEAWETSLH------DIRIQICLLRD
        ALSWWIV++R+L  D   VTWEKFK+LF+ RYFP W++H+K+ EL  L QG+RTV EYD EFI L SLV +    ++ E  L       DI  Q+C   +
Subjt:  ALSWWIVAERHLK-DEVTVTWEKFKELFFMRYFPRWMQHQKYAELCSLEQGDRTVAEYDVEFIKLCSLVYDFIGSEAWETSLH------DIRIQICLLRD

Query:  TTYPQVRDMALNLERRLNAQE
         +Y  +R+ AL +E+ LN ++
Subjt:  TTYPQVRDMALNLERRLNAQE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAATCGAAAGTGAAGACCATTAAAAACCCCCCAGTTGCAATCAAGCTGGAAGCTGCAGAACGAGGAGATGTGGCTGAATCAAAAGTAAAAACCAACAAA
AACCCCCCAATTGCAATCAAGGAAGCTGCAGATCAAGGAGATGTTTACAACAACATTTCCAATTTGGTTACCGAAATGAGGATTGTTGCGAATAGACAGATTGAT
ATGGAGCATAGGAGCAAAATTAATGACTTCTTTGTCTGTGAACCTCCTTGTTTTGGTCAGGAAACCGATCCTTACGCTGCTAAATACTGGATTTTGAAGCTGGAA
ACTATCTTTGATTGCATAGATTGTTCAGATGAGCAGAGGGTTTCTTTTGCTGTCCTGAAGCTAAATGATTCTGCACTCTCTTGGTGGATAGTGGCAGAAAGACAC
TTGAAAGATGAAGTTACAGTGACATGGGAGAAGTTTAAGGAATTATTCTTTATGAGGTACTTCCCACGATGGATGCAACACCAGAAGTATGCCGAACTCTGTAGT
CTGGAACAGGGAGATAGAACCGTAGCAGAGTACGACGTAGAGTTCATCAAGTTGTGTTCTCTTGTCTACGATTTCATTGGTAGTGAGGCTTGGGAGACTTCCCTG
CATGATATTAGGATACAGATTTGCTTATTACGTGACACCACCTACCCCCAGGTGAGGGACATGGCGTTAAATCTGGAACGCCGCCTCAACGCTCAAGAGGATCAA
GATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAATCGAAAGTGAAGACCATTAAAAACCCCCCAGTTGCAATCAAGCTGGAAGCTGCAGAACGAGGAGATGTGGCTGAATCAAAAGTAAAAACCAACAAA
AACCCCCCAATTGCAATCAAGGAAGCTGCAGATCAAGGAGATGTTTACAACAACATTTCCAATTTGGTTACCGAAATGAGGATTGTTGCGAATAGACAGATTGAT
ATGGAGCATAGGAGCAAAATTAATGACTTCTTTGTCTGTGAACCTCCTTGTTTTGGTCAGGAAACCGATCCTTACGCTGCTAAATACTGGATTTTGAAGCTGGAA
ACTATCTTTGATTGCATAGATTGTTCAGATGAGCAGAGGGTTTCTTTTGCTGTCCTGAAGCTAAATGATTCTGCACTCTCTTGGTGGATAGTGGCAGAAAGACAC
TTGAAAGATGAAGTTACAGTGACATGGGAGAAGTTTAAGGAATTATTCTTTATGAGGTACTTCCCACGATGGATGCAACACCAGAAGTATGCCGAACTCTGTAGT
CTGGAACAGGGAGATAGAACCGTAGCAGAGTACGACGTAGAGTTCATCAAGTTGTGTTCTCTTGTCTACGATTTCATTGGTAGTGAGGCTTGGGAGACTTCCCTG
CATGATATTAGGATACAGATTTGCTTATTACGTGACACCACCTACCCCCAGGTGAGGGACATGGCGTTAAATCTGGAACGCCGCCTCAACGCTCAAGAGGATCAA
GATTAA
Protein sequenceShow/hide protein sequence
MAESKVKTIKNPPVAIKLEAAERGDVAESKVKTNKNPPIAIKEAADQGDVYNNISNLVTEMRIVANRQIDMEHRSKINDFFVCEPPCFGQETDPYAAKYWILKLE
TIFDCIDCSDEQRVSFAVLKLNDSALSWWIVAERHLKDEVTVTWEKFKELFFMRYFPRWMQHQKYAELCSLEQGDRTVAEYDVEFIKLCSLVYDFIGSEAWETSL
HDIRIQICLLRDTTYPQVRDMALNLERRLNAQEDQD