; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc10g09310 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g09310
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description60S ribosomal protein L27
Genome locationchr10:6920571..6922538
RNA-Seq ExpressionMoc10g09310
SyntenyMoc10g09310
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001141 - Ribosomal protein L27e
IPR008991 - Translation protein SH3-like domain superfamily
IPR038655 - Ribosomal protein L27e superfamily
IPR041991 - Eukaryotic Ribosomal Protein L27, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649234.1 hypothetical protein Csa_014974 [Cucumis sativus]2.6e-6596.3Show/hide
Query:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLKPNKAV+VLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYP+KVIRKDS+KKTAKKSRVKAF+KLVNYRHLMPTRYTLDVDLKDVVT+DSL
Subjt:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
        QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
Subjt:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

XP_004147739.1 60S ribosomal protein L27 [Cucumis sativus]2.0e-6597.04Show/hide
Query:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLKPNKAV+VLQGRYAGRKAVI+RAFDDGTRDRAYGHCLVAGIKKYP+KVIRKDS+KKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL
Subjt:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
        QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
Subjt:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

XP_004147740.1 60S ribosomal protein L27 [Cucumis sativus]2.6e-6596.3Show/hide
Query:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLKPNKAV+VLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYP+KVIRKDS+KKTAKKSRVKAF+KLVNYRHLMPTRYTLDVDLKDVVT+DSL
Subjt:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
        QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
Subjt:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

XP_008451849.1 PREDICTED: 60S ribosomal protein L27-like [Cucumis melo]5.8e-6596.3Show/hide
Query:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLKPNKAV+VLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYP+KVIRKDS+KKTAKKSRVKAF+KLVNYRHLMPTRYTLDVDLKDVVTIDSL
Subjt:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
        QSKDKKV+AAKETKKRFEERFKTGKNRWFFTKLRF
Subjt:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

XP_008451854.1 PREDICTED: 60S ribosomal protein L27 [Cucumis melo]5.8e-6596.3Show/hide
Query:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLKPNKAV+VLQGRYAGRKAVI+RAFDDGTRDRAYGHCLVAGIKKYP+KVIRKDS+KKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL
Subjt:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
        QSKDKKV+AAKETKKRFEERFKTGKNRWFFTKLRF
Subjt:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

TrEMBL top hitse value%identityAlignment
A0A0A0KVB4 60S ribosomal protein L271.3e-6596.3Show/hide
Query:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLKPNKAV+VLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYP+KVIRKDS+KKTAKKSRVKAF+KLVNYRHLMPTRYTLDVDLKDVVT+DSL
Subjt:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
        QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
Subjt:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

A0A0A0KXF9 60S ribosomal protein L279.6e-6697.04Show/hide
Query:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLKPNKAV+VLQGRYAGRKAVI+RAFDDGTRDRAYGHCLVAGIKKYP+KVIRKDS+KKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL
Subjt:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
        QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
Subjt:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

A0A1S3BSF6 60S ribosomal protein L272.8e-6596.3Show/hide
Query:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLKPNKAV+VLQGRYAGRKAVI+RAFDDGTRDRAYGHCLVAGIKKYP+KVIRKDS+KKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL
Subjt:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
        QSKDKKV+AAKETKKRFEERFKTGKNRWFFTKLRF
Subjt:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

A0A5A7V5M7 60S ribosomal protein L272.8e-6596.3Show/hide
Query:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLKPNKAV+VLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYP+KVIRKDS+KKTAKKSRVKAF+KLVNYRHLMPTRYTLDVDLKDVVTIDSL
Subjt:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
        QSKDKKV+AAKETKKRFEERFKTGKNRWFFTKLRF
Subjt:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

A0A5A7VAJ2 60S ribosomal protein L272.8e-6596.3Show/hide
Query:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLKPNKAV+VLQGRYAGRKAVI+RAFDDGTRDRAYGHCLVAGIKKYP+KVIRKDS+KKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL
Subjt:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
        QSKDKKV+AAKETKKRFEERFKTGKNRWFFTKLRF
Subjt:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

SwissProt top hitse value%identityAlignment
P41101 60S ribosomal protein L275.3e-5376.98Show/hide
Query:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDL----KDVVT
        M KFLKPNKAV++LQG+YAGRKAVI+RAFD+GTRDR YGHCLVAGI +YP KVIRKDS+KK  KKSRVKAF+KLVNY H+MPTRYTLD DL    KDVV 
Subjt:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDL----KDVVT

Query:  IDSLQSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
         D LQ++DKKVT A+ TK R  ERFKTGKNRWFFTKLRF
Subjt:  IDSLQSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

P51419 60S ribosomal protein L27-34.9e-5982.96Show/hide
Query:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLK NKAV++LQGRYAG+KAVII++FDDG RDR YGHCLVAG+KKYPSKVIRKDS+KKTAKKSRVK F+KLVNY+HLMPTRYTLDVDLK+V T+D+L
Subjt:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
        QSKDKKV A KE K + EERFKTGKNRWFFTKLRF
Subjt:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

Q05462 60S ribosomal protein L275.8e-6085.19Show/hide
Query:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLKPNKAV++LQGRYAG+KAVI++ FDDGTR++ YGHCLVAGIKK+PSKVI+KDS+KKTAKKSRVKAFVKLVNY+HLMPTRYTLDVDLKD V  D L
Subjt:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
        QSKDKKVTA KETKK  EERFKTGKNRWFFTKLRF
Subjt:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

Q8LCL3 60S ribosomal protein L27-24.9e-5982.96Show/hide
Query:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLK NKAV++LQGRYAG+KAVII++FDDGT DR YGHCLVAG+KKYPSKVIRKDS+KKTAKKSRVK F+KLVNY+HLMPTRYTLDVDLK+V T+D+L
Subjt:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
        +SKDKKVTA KE K + EERFKTGKNRWFFTKLRF
Subjt:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

Q9SKX8 60S ribosomal protein L27-19.6e-5575.56Show/hide
Query:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVK +KP KAV++LQGRY G+KAVI+++FDDGT ++ YGHCLVAG+KKYPSKVIRKDS+KKTAKKSRVK F K++NY+H+MPTRYTLD+DLK+VV+ D++
Subjt:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
         SKDKKVTA KE K +FEERFKTGKNRWFFTKLRF
Subjt:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

Arabidopsis top hitse value%identityAlignment
AT2G32220.1 Ribosomal L27e protein family6.8e-5675.56Show/hide
Query:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVK +KP KAV++LQGRY G+KAVI+++FDDGT ++ YGHCLVAG+KKYPSKVIRKDS+KKTAKKSRVK F K++NY+H+MPTRYTLD+DLK+VV+ D++
Subjt:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
         SKDKKVTA KE K +FEERFKTGKNRWFFTKLRF
Subjt:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

AT3G22230.1 Ribosomal L27e protein family3.5e-6082.96Show/hide
Query:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLK NKAV++LQGRYAG+KAVII++FDDGT DR YGHCLVAG+KKYPSKVIRKDS+KKTAKKSRVK F+KLVNY+HLMPTRYTLDVDLK+V T+D+L
Subjt:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
        +SKDKKVTA KE K + EERFKTGKNRWFFTKLRF
Subjt:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

AT4G15000.1 Ribosomal L27e protein family3.5e-6082.96Show/hide
Query:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLK NKAV++LQGRYAG+KAVII++FDDG RDR YGHCLVAG+KKYPSKVIRKDS+KKTAKKSRVK F+KLVNY+HLMPTRYTLDVDLK+V T+D+L
Subjt:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
        QSKDKKV A KE K + EERFKTGKNRWFFTKLRF
Subjt:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

AT4G15000.2 Ribosomal L27e protein family1.6e-5281.3Show/hide
Query:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLK NKAV++LQGRYAG+KAVII++FDDG RDR YGHCLVAG+KKYPSKVIRKDS+KKTAKKSRVK F+KLVNY+HLMPTRYTLDVDLK+V T+D+L
Subjt:  MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVTAAKETKKRFEERFKT
        QSKDKKV A KE K + EERFKT
Subjt:  QSKDKKVTAAKETKKRFEERFKT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAGTTTCTCAAGCCGAACAAGGCCGTCGTCGTTCTTCAAGGCCGCTATGCCGGCCGGAAGGCGGTGATAATTCGCGCCTTCGACGACGGCACCCGAGAT
CGGGCCTATGGCCACTGCTTGGTTGCGGGAATCAAGAAGTATCCGAGCAAGGTCATCCGCAAGGACTCTTCTAAGAAGACCGCCAAGAAATCGCGAGTCAAGGCC
TTCGTCAAGCTCGTCAACTACAGGCATCTAATGCCCACCAGGTACACTCTCGATGTAGATCTTAAGGATGTCGTCACCATCGATTCCTTGCAGTCGAAGGACAAG
AAGGTTACGGCCGCTAAGGAGACCAAGAAGAGGTTCGAGGAGAGGTTCAAGACGGGCAAGAACAGGTGGTTTTTCACCAAGCTCAGGTTCGTCTGCCGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAAGTTTCTCAAGCCGAACAAGGCCGTCGTCGTTCTTCAAGGCCGCTATGCCGGCCGGAAGGCGGTGATAATTCGCGCCTTCGACGACGGCACCCGAGAT
CGGGCCTATGGCCACTGCTTGGTTGCGGGAATCAAGAAGTATCCGAGCAAGGTCATCCGCAAGGACTCTTCTAAGAAGACCGCCAAGAAATCGCGAGTCAAGGCC
TTCGTCAAGCTCGTCAACTACAGGCATCTAATGCCCACCAGGTACACTCTCGATGTAGATCTTAAGGATGTCGTCACCATCGATTCCTTGCAGTCGAAGGACAAG
AAGGTTACGGCCGCTAAGGAGACCAAGAAGAGGTTCGAGGAGAGGTTCAAGACGGGCAAGAACAGGTGGTTTTTCACCAAGCTCAGGTTCGTCTGCCGGTAA
Protein sequenceShow/hide protein sequence
MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDK
KVTAAKETKKRFEERFKTGKNRWFFTKLRFVCR