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Moc10g10570 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g10570
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRING-type domain-containing protein
Genome locationchr10:8112099..8114854
RNA-Seq ExpressionMoc10g10570
SyntenyMoc10g10570
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577374.1 RING-H2 finger protein ATL8, partial [Cucurbita argyrosperma subsp. sororia]1.3e-2652.71Show/hide
Query:  MPLIVVFGFILTVLVFFSFFGVCIYICFQCYEQGFSEAD----RTGGRENGETAAAVVAMDPEELNREIESAVEKLTKPPGENDDEEEPPS-ELLSECAI
        M +IV+FG  L +LV  +FF +C+YICFQCY  GF E D     +G      T A  VA+D  E+NR I+ A+EKLTKP  E D E++  +  +LS+CAI
Subjt:  MPLIVVFGFILTVLVFFSFFGVCIYICFQCYEQGFSEAD----RTGGRENGETAAAVVAMDPEELNREIESAVEKLTKPPGENDDEEEPPS-ELLSECAI

Query:  CLEEFGDRASCRVFPNCKHMFHTNCIISW
        CLEEF +   CRVFPNCKHMFHT+CI+ W
Subjt:  CLEEFGDRASCRVFPNCKHMFHTNCIISW

KAG6600728.1 putative RING-H2 finger protein ATL19, partial [Cucurbita argyrosperma subsp. sororia]1.7e-2956.82Show/hide
Query:  MPLIVVFGFILTVLVFFSFFGVCIYICFQCYEQGFSEADRTGGRENG-----ETAAAVVAMDPEELNREIESAVEKLTKP---PGENDDEEEPPSELLSE
        MP+IV+FGF+LTVLV FSFF +CIYICFQC+ QGF  A +T  R+NG       A     ++PEELN +    +EKLT P    G  +++ E  S  L+E
Subjt:  MPLIVVFGFILTVLVFFSFFGVCIYICFQCYEQGFSEADRTGGRENG-----ETAAAVVAMDPEELNREIESAVEKLTKP---PGENDDEEEPPSELLSE

Query:  CAICLEEFGDRASCRVFPNCKHMFHTNCIISW
        CAICLE FG+R SCRVFPNCKHMFHT+CII W
Subjt:  CAICLEEFGDRASCRVFPNCKHMFHTNCIISW

KAG7031368.1 RING-H2 finger protein ATL52, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-2956.82Show/hide
Query:  MPLIVVFGFILTVLVFFSFFGVCIYICFQCYEQGFSEADRTGGRENG-----ETAAAVVAMDPEELNREIESAVEKLTKP---PGENDDEEEPPSELLSE
        MP+IV+FGF+LTVLV FSFF +CIYICFQC+ QGF  A +T  R+NG       A     ++PEELN +    +EKLT P    G  +++ E  S  L+E
Subjt:  MPLIVVFGFILTVLVFFSFFGVCIYICFQCYEQGFSEADRTGGRENG-----ETAAAVVAMDPEELNREIESAVEKLTKP---PGENDDEEEPPSELLSE

Query:  CAICLEEFGDRASCRVFPNCKHMFHTNCIISW
        CAICLE FG+R SCRVFPNCKHMFHT+CII W
Subjt:  CAICLEEFGDRASCRVFPNCKHMFHTNCIISW

XP_011652743.1 uncharacterized protein LOC105435076 [Cucumis sativus]2.3e-1846.9Show/hide
Query:  ICFQCYEQ--------GFSEADRTGGRE-----NGETAAAVVAMDPEELNREIESAVEKLTKPPG-ENDDEEEPPSELLSECAICLEEFGDRASCRVFPN
        IC + +E         GFSE+++ G R         T A  +  DPEE NR+++ A+EKLTKP    N +E +     LSEC ICLE+ G+R SCRVFPN
Subjt:  ICFQCYEQ--------GFSEADRTGGRE-----NGETAAAVVAMDPEELNREIESAVEKLTKPPG-ENDDEEEPPSELLSECAICLEEFGDRASCRVFPN

Query:  CKHMFHTNCIISW
        CKH+FHT+CII+W
Subjt:  CKHMFHTNCIISW

XP_023545744.1 RING-H2 finger protein ATL52-like [Cucurbita pepo subsp. pepo]8.1e-1652.53Show/hide
Query:  GFSEADRTGGRENG-----ETAAAVVAMDPEELNREIESAVEKLTKP---PGENDDEEEPPSELLSECAICLEEFGDRASCRVFPNCKHMFHTNCIISW
        GF  A +T  R+NG       A  V  ++PEELN +I  A+EKLT P    G  +++ E     L+ECAICLE FG+R SCRVFPNCKHMFHT+CII W
Subjt:  GFSEADRTGGRENG-----ETAAAVVAMDPEELNREIESAVEKLTKP---PGENDDEEEPPSELLSECAICLEEFGDRASCRVFPNCKHMFHTNCIISW

TrEMBL top hitse value%identityAlignment
A0A0A0L7Y8 RING-type domain-containing protein1.3e-1457.14Show/hide
Query:  MDPEELNREIESAVEKLTKPPG-ENDDEEEPPSELLSECAICLEEFGDRASCRVFPNCKHMFHTNCIISW
        + P E NR+++ A+EKLTKP    N +E +     LSEC ICLE+ G+R SCRVFPNCKH+FHT+CII+W
Subjt:  MDPEELNREIESAVEKLTKPPG-ENDDEEEPPSELLSECAICLEEFGDRASCRVFPNCKHMFHTNCIISW

A0A3S4PGX0 E3 ubiquitin-protein ligase ATL23-like protein2.8e-0648.39Show/hide
Query:  KLTKPPGENDDEE---EPP-----SELLSECAICLEEFGDRASCRVFPNCKHMFHTNCIISW
        +LTK   E++ EE   EPP     ++L S CAICLE+F +   CRV P+CKHMFH  C+ +W
Subjt:  KLTKPPGENDDEE---EPP-----SELLSECAICLEEFGDRASCRVFPNCKHMFHTNCIISW

A0A7J8N2H5 RING-type E3 ubiquitin transferase2.8e-0637.1Show/hide
Query:  VVFGFILTVLVFFSFFGVCIYICFQCYE--QGFSEADRTGGRENGETAAAVV--AMDPEELNREIESAVEKLTKPPGENDDEEEPPSELLSECAICLEEF
        V+FG ++ +   F  F V +  CF C +   G S  D     ENG  ++ VV  AM  +    E++  +  +T       +EEE      SECAICLEEF
Subjt:  VVFGFILTVLVFFSFFGVCIYICFQCYE--QGFSEADRTGGRENGETAAAVV--AMDPEELNREIESAVEKLTKPPGENDDEEEPPSELLSECAICLEEF

Query:  GDRASCRVFPNCKHMFHTNCIISW
             CRV PNCKH +H +CI  W
Subjt:  GDRASCRVFPNCKHMFHTNCIISW

A0A7J9HV15 RING-type E3 ubiquitin transferase8.2e-0636.29Show/hide
Query:  VVFGFILTVLVFFSFFGVCIYICFQCYE--QGFSEADRTGGRENGETAAAVV--AMDPEELNREIESAVEKLTKPPGENDDEEEPPSELLSECAICLEEF
        V+FG ++ +   F  F V +  CF C +   G S  D     ENG  ++ VV  AM  +    E++  +  +T       +EEE      SEC ICLEEF
Subjt:  VVFGFILTVLVFFSFFGVCIYICFQCYE--QGFSEADRTGGRENGETAAAVV--AMDPEELNREIESAVEKLTKPPGENDDEEEPPSELLSECAICLEEF

Query:  GDRASCRVFPNCKHMFHTNCIISW
             CRV PNCKH +H +CI  W
Subjt:  GDRASCRVFPNCKHMFHTNCIISW

A0A7J9MHG3 RING-type E3 ubiquitin transferase2.8e-0637.1Show/hide
Query:  VVFGFILTVLVFFSFFGVCIYICFQCYE--QGFSEADRTGGRENGETAAAVV--AMDPEELNREIESAVEKLTKPPGENDDEEEPPSELLSECAICLEEF
        V+FG ++ +   F  F V +  CF C +   G S  D     ENG  ++ VV  AM  +    E++  +  +T       +EEE      SECAICLEEF
Subjt:  VVFGFILTVLVFFSFFGVCIYICFQCYE--QGFSEADRTGGRENGETAAAVV--AMDPEELNREIESAVEKLTKPPGENDDEEEPPSELLSECAICLEEF

Query:  GDRASCRVFPNCKHMFHTNCIISW
             CRV PNCKH +H +CI  W
Subjt:  GDRASCRVFPNCKHMFHTNCIISW

SwissProt top hitse value%identityAlignment
P93823 RING-H2 finger protein ATL13.9e-0528.91Show/hide
Query:  IVVFGFILTVLVFFSFFGVCIYICFQCYEQGFSEADRTGGRENGETAAAVVAMDPEELNREI-ESAVEKLTKPPGENDD---EEEPPSELLSECAICLEE
        I V G + T  +  S++   I  C   ++       R    +N      ++   P E+NR + ESA+  +     +  D    EE  S+   EC++CL E
Subjt:  IVVFGFILTVLVFFSFFGVCIYICFQCYEQGFSEADRTGGRENGETAAAVVAMDPEELNREI-ESAVEKLTKPPGENDD---EEEPPSELLSECAICLEE

Query:  FGDRASCRVFPNCKHMFHTNCIISWSFG
        F +    R+ PNC H+FH +CI  W  G
Subjt:  FGDRASCRVFPNCKHMFHTNCIISWSFG

Q8LC69 RING-H2 finger protein ATL89.4e-0738.96Show/hide
Query:  ETAAAVVAMDPEELNREIESAVEKLTKPPGENDDEEEPPSELLSECAICLEEFGDRASCRVFPNCKHMFHTNCIISW
        +T    VA   + L +++  ++ KLT  P      + PP+E L ECAICL EF      RV P C H FH +CI +W
Subjt:  ETAAAVVAMDPEELNREIESAVEKLTKPPGENDDEEEPPSELLSECAICLEEFGDRASCRVFPNCKHMFHTNCIISW

Q8LF65 RING-H2 finger protein ATL172.7e-0660.61Show/hide
Query:  ECAICLEEFGDRASCRVFPNCKHMFHTNCIISW
        EC++CL EF D  S RV PNCKH FH +CI  W
Subjt:  ECAICLEEFGDRASCRVFPNCKHMFHTNCIISW

Q9LM69 RING-H2 finger protein ATL802.7e-0636.05Show/hide
Query:  DRTGGRENGETAAAVVAMDPEELNREIESAVEKLTKPPGENDDEEEPPSELLSECAICLEEFGDRASCRVFPNCKHMFHTNCIISW
        +RT      ++    VA   + L +++  ++ KLT  P      E P SE  +ECAICL EF      RV P C H FH  CI +W
Subjt:  DRTGGRENGETAAAVVAMDPEELNREIESAVEKLTKPPGENDDEEEPPSELLSECAICLEEFGDRASCRVFPNCKHMFHTNCIISW

Q9LSW9 RING-H2 finger protein ATL164.2e-0747.92Show/hide
Query:  GENDDEEEPPSELLSECAICLEEFGDRASCRVFPNCKHMFHTNCIISW
        GE ++EEE  S+   EC++CL EF D    R+ PNC H+FH +CI  W
Subjt:  GENDDEEEPPSELLSECAICLEEFGDRASCRVFPNCKHMFHTNCIISW

Arabidopsis top hitse value%identityAlignment
AT1G04360.1 RING/U-box superfamily protein2.8e-0628.91Show/hide
Query:  IVVFGFILTVLVFFSFFGVCIYICFQCYEQGFSEADRTGGRENGETAAAVVAMDPEELNREI-ESAVEKLTKPPGENDD---EEEPPSELLSECAICLEE
        I V G + T  +  S++   I  C   ++       R    +N      ++   P E+NR + ESA+  +     +  D    EE  S+   EC++CL E
Subjt:  IVVFGFILTVLVFFSFFGVCIYICFQCYEQGFSEADRTGGRENGETAAAVVAMDPEELNREI-ESAVEKLTKPPGENDD---EEEPPSELLSECAICLEE

Query:  FGDRASCRVFPNCKHMFHTNCIISWSFG
        F +    R+ PNC H+FH +CI  W  G
Subjt:  FGDRASCRVFPNCKHMFHTNCIISWSFG

AT1G20823.1 RING/U-box superfamily protein1.9e-0736.05Show/hide
Query:  DRTGGRENGETAAAVVAMDPEELNREIESAVEKLTKPPGENDDEEEPPSELLSECAICLEEFGDRASCRVFPNCKHMFHTNCIISW
        +RT      ++    VA   + L +++  ++ KLT  P      E P SE  +ECAICL EF      RV P C H FH  CI +W
Subjt:  DRTGGRENGETAAAVVAMDPEELNREIESAVEKLTKPPGENDDEEEPPSELLSECAICLEEFGDRASCRVFPNCKHMFHTNCIISW

AT1G76410.1 RING/U-box superfamily protein6.7e-0838.96Show/hide
Query:  ETAAAVVAMDPEELNREIESAVEKLTKPPGENDDEEEPPSELLSECAICLEEFGDRASCRVFPNCKHMFHTNCIISW
        +T    VA   + L +++  ++ KLT  P      + PP+E L ECAICL EF      RV P C H FH +CI +W
Subjt:  ETAAAVVAMDPEELNREIESAVEKLTKPPGENDDEEEPPSELLSECAICLEEFGDRASCRVFPNCKHMFHTNCIISW

AT4G15975.1 RING/U-box superfamily protein1.9e-0760.61Show/hide
Query:  ECAICLEEFGDRASCRVFPNCKHMFHTNCIISW
        EC++CL EF D  S RV PNCKH FH +CI  W
Subjt:  ECAICLEEFGDRASCRVFPNCKHMFHTNCIISW

AT5G43420.1 RING/U-box superfamily protein3.0e-0847.92Show/hide
Query:  GENDDEEEPPSELLSECAICLEEFGDRASCRVFPNCKHMFHTNCIISW
        GE ++EEE  S+   EC++CL EF D    R+ PNC H+FH +CI  W
Subjt:  GENDDEEEPPSELLSECAICLEEFGDRASCRVFPNCKHMFHTNCIISW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCTTAATCGTCGTCTTCGGCTTCATCCTCACAGTTCTCGTGTTCTTTTCCTTCTTCGGCGTCTGCATCTACATCTGCTTCCAATGCTACGAGCAGGGATTCTCAGA
GGCCGATCGAACCGGCGGCCGTGAAAATGGAGAAACGGCGGCGGCGGTGGTGGCGATGGATCCGGAGGAACTGAATCGTGAGATTGAATCGGCGGTGGAGAAATTGACGA
AGCCGCCGGGGGAGAACGATGATGAGGAGGAACCGCCGTCGGAATTATTGAGCGAATGCGCGATTTGTTTGGAGGAATTTGGGGATAGGGCTTCGTGCAGAGTTTTCCCC
AATTGCAAACATATGTTTCACACCAATTGCATAATCAGCTGGTCTTTTGGACTTATTCTAGGTGCTCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCCTTAATCGTCGTCTTCGGCTTCATCCTCACAGTTCTCGTGTTCTTTTCCTTCTTCGGCGTCTGCATCTACATCTGCTTCCAATGCTACGAGCAGGGATTCTCAGA
GGCCGATCGAACCGGCGGCCGTGAAAATGGAGAAACGGCGGCGGCGGTGGTGGCGATGGATCCGGAGGAACTGAATCGTGAGATTGAATCGGCGGTGGAGAAATTGACGA
AGCCGCCGGGGGAGAACGATGATGAGGAGGAACCGCCGTCGGAATTATTGAGCGAATGCGCGATTTGTTTGGAGGAATTTGGGGATAGGGCTTCGTGCAGAGTTTTCCCC
AATTGCAAACATATGTTTCACACCAATTGCATAATCAGCTGGTCTTTTGGACTTATTCTAGGTGCTCAGTAA
Protein sequenceShow/hide protein sequence
MPLIVVFGFILTVLVFFSFFGVCIYICFQCYEQGFSEADRTGGRENGETAAAVVAMDPEELNREIESAVEKLTKPPGENDDEEEPPSELLSECAICLEEFGDRASCRVFP
NCKHMFHTNCIISWSFGLILGAQ