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Moc10g11330 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g11330
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr10:8654566..8664545
RNA-Seq ExpressionMoc10g11330
SyntenyMoc10g11330
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156048.1 uncharacterized protein LOC111023016 [Momordica charantia]1.5e-1175.44Show/hide
Query:  GEPVTSLNEMTDLSDEVRSSPGHRLNSTTLDREELAEEVESVLLTAEDRRVNIGTRL
        GEPVT LN+ TDLS E R SPGHRLNSTTLDR   AEEVESV LT E++RVNIGT+L
Subjt:  GEPVTSLNEMTDLSDEVRSSPGHRLNSTTLDREELAEEVESVLLTAEDRRVNIGTRL

XP_022156571.1 uncharacterized protein LOC111023448 [Momordica charantia]7.2e-4373.64Show/hide
Query:  MNLDESHQCFKKKNLKEVVDHSGEAGPSHDHQLNPNTLDRGEPLSGLNKATDLSGEVRPSPGHRLNPTTLDRGEPVTSLNEMTDLSDEVRSSPGHRLNST
        MN DESH+CF++K+LK+  DH  EA PS D QLNP TLD GEP+SGLNKATDLSG+ RPSPG+RLNPTTLD+G PV  L + TDLS + R SPGHRLNST
Subjt:  MNLDESHQCFKKKNLKEVVDHSGEAGPSHDHQLNPNTLDRGEPLSGLNKATDLSGEVRPSPGHRLNPTTLDRGEPVTSLNEMTDLSDEVRSSPGHRLNST

Query:  TLDREELAEEVESVLLTAEDRRVNIGTRL
        TLDR E AEEVESV LTAEDRRVNIGT+L
Subjt:  TLDREELAEEVESVLLTAEDRRVNIGTRL

XP_022158042.1 uncharacterized protein LOC111024621 [Momordica charantia]8.0e-1036.84Show/hide
Query:  ESHQCFKKKNLKEVVDHSGEAGPSHDHQLNPNTLDRGEPLSGL--------NKATDLSGEVRPSPGHRLNPTTLDRGEPVTSLNEMTDLSDEVRSSPGHR
        E  QCF++++L+   +  GE  PS DHQ NP T D+GEP+ G+        ++A D  GE+  SP    +PT  DRGEP                     
Subjt:  ESHQCFKKKNLKEVVDHSGEAGPSHDHQLNPNTLDRGEPLSGL--------NKATDLSGEVRPSPGHRLNPTTLDRGEPVTSLNEMTDLSDEVRSSPGHR

Query:  LNSTTLDREELAEEVESVLLTAEDRRVNIGTRL
                    +EVES+ LT++DRRVNIGTRL
Subjt:  LNSTTLDREELAEEVESVLLTAEDRRVNIGTRL

TrEMBL top hitse value%identityAlignment
A0A6J1DPJ5 uncharacterized protein LOC1110230167.1e-1275.44Show/hide
Query:  GEPVTSLNEMTDLSDEVRSSPGHRLNSTTLDREELAEEVESVLLTAEDRRVNIGTRL
        GEPVT LN+ TDLS E R SPGHRLNSTTLDR   AEEVESV LT E++RVNIGT+L
Subjt:  GEPVTSLNEMTDLSDEVRSSPGHRLNSTTLDREELAEEVESVLLTAEDRRVNIGTRL

A0A6J1DVC6 Ribonuclease H3.5e-4373.64Show/hide
Query:  MNLDESHQCFKKKNLKEVVDHSGEAGPSHDHQLNPNTLDRGEPLSGLNKATDLSGEVRPSPGHRLNPTTLDRGEPVTSLNEMTDLSDEVRSSPGHRLNST
        MN DESH+CF++K+LK+  DH  EA PS D QLNP TLD GEP+SGLNKATDLSG+ RPSPG+RLNPTTLD+G PV  L + TDLS + R SPGHRLNST
Subjt:  MNLDESHQCFKKKNLKEVVDHSGEAGPSHDHQLNPNTLDRGEPLSGLNKATDLSGEVRPSPGHRLNPTTLDRGEPVTSLNEMTDLSDEVRSSPGHRLNST

Query:  TLDREELAEEVESVLLTAEDRRVNIGTRL
        TLDR E AEEVESV LTAEDRRVNIGT+L
Subjt:  TLDREELAEEVESVLLTAEDRRVNIGTRL

A0A6J1DW49 uncharacterized protein LOC1110246213.9e-1036.84Show/hide
Query:  ESHQCFKKKNLKEVVDHSGEAGPSHDHQLNPNTLDRGEPLSGL--------NKATDLSGEVRPSPGHRLNPTTLDRGEPVTSLNEMTDLSDEVRSSPGHR
        E  QCF++++L+   +  GE  PS DHQ NP T D+GEP+ G+        ++A D  GE+  SP    +PT  DRGEP                     
Subjt:  ESHQCFKKKNLKEVVDHSGEAGPSHDHQLNPNTLDRGEPLSGL--------NKATDLSGEVRPSPGHRLNPTTLDRGEPVTSLNEMTDLSDEVRSSPGHR

Query:  LNSTTLDREELAEEVESVLLTAEDRRVNIGTRL
                    +EVES+ LT++DRRVNIGTRL
Subjt:  LNSTTLDREELAEEVESVLLTAEDRRVNIGTRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCTTGATGAGAGCCATCAGTGCTTCAAAAAGAAGAACCTGAAAGAAGTGGTCGATCACTCGGGTGAGGCAGGACCGAGCCATGATCATCAACTTAATCCA
AACACCCTTGACAGGGGAGAACCATTGTCGGGCCTAAATAAAGCAACAGACCTCTCAGGTGAGGTAAGGCCGAGCCCTGGTCATCGACTTAATCCGACCACCCTT
GACAGAGGAGAACCAGTGACGAGCCTGAATGAAATGACCGACCTCTCGGATGAGGTAAGGTCGAGCCCTGGTCATCGACTTAATTCGACCACCCTTGACAGGGAA
GAACTGGCTGAGGAGGTAGAATCTGTCCTTCTGACAGCCGAAGATCGACGGGTCAACATCGGAACCAGGTTGGTTCGACCCACAAAAAGGGGAACAAGACGCAAG
TTGAAGAGGGTTGGTTTGGCTATAATGGGCGTCGGCTCGGTAATTAGATCCCAATACCGAGGTGACGAAACTTGCCCTTACCATCACAAGACCACGTATGTCCTT
CTCCTCCAATCAAGATATGCCACTGTGAAGCTGAAAATCACCTCCAACATTGCCCCCCCTATGTTGAGCTATGTCGGGGTGATTGTCAGCCAAGAATTGACGGTT
CGAAAGGTCAGCTTCACTGGTGAGCACGAGGCCACCAGACAAATTGAGGAACTAAAGGCTGAACTAGCGAAGGCTCGAACAGAGATCGATGAGTTGACCAAATCA
ACCTCATCTATAGAAAAATTCCTTAGTCAGACTGATCAAAAGGTAAAAATGAAGGATTTTGATGCTCTCAAGTTAGCCATAAAGAAGTTCCCTGAGTTCGATGAT
CTAGTGTTGGACCTAGCTAATGAAGGCTTCAACATCACCATTGCTGAGGTGAAGAATCTTGCTCCCGACTTAGACCTCGCCCCGGTGTACCAGGCGTACGAGCCC
GCAATAGAGGAGGATGAGGACGAGGCTCGATCAAAAAGTTTGATGGTGTCCTTGCTGATCAGCAGGAGGCCGATGGCGACACTTGATTCTCTTACCTTCTTTTCT
CCCTTTTTCTTTATGGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATCTTGATGAGAGCCATCAGTGCTTCAAAAAGAAGAACCTGAAAGAAGTGGTCGATCACTCGGGTGAGGCAGGACCGAGCCATGATCATCAACTTAATCCA
AACACCCTTGACAGGGGAGAACCATTGTCGGGCCTAAATAAAGCAACAGACCTCTCAGGTGAGGTAAGGCCGAGCCCTGGTCATCGACTTAATCCGACCACCCTT
GACAGAGGAGAACCAGTGACGAGCCTGAATGAAATGACCGACCTCTCGGATGAGGTAAGGTCGAGCCCTGGTCATCGACTTAATTCGACCACCCTTGACAGGGAA
GAACTGGCTGAGGAGGTAGAATCTGTCCTTCTGACAGCCGAAGATCGACGGGTCAACATCGGAACCAGGTTGGTTCGACCCACAAAAAGGGGAACAAGACGCAAG
TTGAAGAGGGTTGGTTTGGCTATAATGGGCGTCGGCTCGGTAATTAGATCCCAATACCGAGGTGACGAAACTTGCCCTTACCATCACAAGACCACGTATGTCCTT
CTCCTCCAATCAAGATATGCCACTGTGAAGCTGAAAATCACCTCCAACATTGCCCCCCCTATGTTGAGCTATGTCGGGGTGATTGTCAGCCAAGAATTGACGGTT
CGAAAGGTCAGCTTCACTGGTGAGCACGAGGCCACCAGACAAATTGAGGAACTAAAGGCTGAACTAGCGAAGGCTCGAACAGAGATCGATGAGTTGACCAAATCA
ACCTCATCTATAGAAAAATTCCTTAGTCAGACTGATCAAAAGGTAAAAATGAAGGATTTTGATGCTCTCAAGTTAGCCATAAAGAAGTTCCCTGAGTTCGATGAT
CTAGTGTTGGACCTAGCTAATGAAGGCTTCAACATCACCATTGCTGAGGTGAAGAATCTTGCTCCCGACTTAGACCTCGCCCCGGTGTACCAGGCGTACGAGCCC
GCAATAGAGGAGGATGAGGACGAGGCTCGATCAAAAAGTTTGATGGTGTCCTTGCTGATCAGCAGGAGGCCGATGGCGACACTTGATTCTCTTACCTTCTTTTCT
CCCTTTTTCTTTATGGCTTAA
Protein sequenceShow/hide protein sequence
MNLDESHQCFKKKNLKEVVDHSGEAGPSHDHQLNPNTLDRGEPLSGLNKATDLSGEVRPSPGHRLNPTTLDRGEPVTSLNEMTDLSDEVRSSPGHRLNSTTLDRE
ELAEEVESVLLTAEDRRVNIGTRLVRPTKRGTRRKLKRVGLAIMGVGSVIRSQYRGDETCPYHHKTTYVLLLQSRYATVKLKITSNIAPPMLSYVGVIVSQELTV
RKVSFTGEHEATRQIEELKAELAKARTEIDELTKSTSSIEKFLSQTDQKVKMKDFDALKLAIKKFPEFDDLVLDLANEGFNITIAEVKNLAPDLDLAPVYQAYEP
AIEEDEDEARSKSLMVSLLISRRPMATLDSLTFFSPFFFMA