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Moc10g12260 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g12260
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionDNA-directed RNA polymerase
Genome locationchr10:9355674..9356265
RNA-Seq ExpressionMoc10g12260
SyntenyMoc10g12260
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA2957421.1 phospholipase A-2-activating, partial [Olea europaea subsp. europaea]6.2e-0744.09Show/hide
Query:  MLSGTPYSFTMFLKNSCAVICAEHIFGVGTKVAYLENLLKITRIALDSPTLGRWVMKSRDTLSQGLDGTGRGSSKPAILVLSTLSCWQMRQVL
        ML G P  FT FLKNS A   A      G KV YLEN    T I  +   LGR +MKS    S G  GTGRGS+KPA         W +++ L
Subjt:  MLSGTPYSFTMFLKNSCAVICAEHIFGVGTKVAYLENLLKITRIALDSPTLGRWVMKSRDTLSQGLDGTGRGSSKPAILVLSTLSCWQMRQVL

KAA0032464.1 uncharacterized protein E6C27_scaffold4060G00050 [Cucumis melo var. makuwa]7.1e-1147.47Show/hide
Query:  MLSGTPYSFTMFLKNSCAVICAEHIFGVGTKVAYLENLLKITRIALDSPTLGRWVMKSRDTLSQGLDGTGRGSSKPAILVLSTLSCWQMRQVLVYCITS
        ML  T ++FT  LKNSC V  AE    VG K AY EN   ITR+   S T  R V+KS +T S GL   G+G +  A     TLSCWQMR V  Y + S
Subjt:  MLSGTPYSFTMFLKNSCAVICAEHIFGVGTKVAYLENLLKITRIALDSPTLGRWVMKSRDTLSQGLDGTGRGSSKPAILVLSTLSCWQMRQVLVYCITS

KAA0054250.1 uncharacterized protein E6C27_scaffold131G002050 [Cucumis melo var. makuwa]1.1e-1159.15Show/hide
Query:  MLSGTPYSFTMFLKNSCAVICAEHIFGVGTKVAYLENLLKITRIALDSPTLGRWVMKSRDTLSQGLDGTGR
        ML GTP++FT  LKN+CAV  AEH      KVAY EN   +T+IA+  P LGRWVMKS +TLSQG  GTG+
Subjt:  MLSGTPYSFTMFLKNSCAVICAEHIFGVGTKVAYLENLLKITRIALDSPTLGRWVMKSRDTLSQGLDGTGR

PHT60301.1 hypothetical protein CQW23_02664 [Capsicum baccatum]2.1e-0742.11Show/hide
Query:  MLSGTPYSFTMFLKNSCAVICAEHIFGVGTKVAYLENLLKITRIALDSPTLGRWVMKSRDTLSQGLDGTGRGSSKPAILVLSTLSCWQMRQVLVY
        M  G P S T  L+N+     A  +      VAYLE     T I      LG+ V+KS  TLS     TG GSS P   + STLSCWQ RQV  Y
Subjt:  MLSGTPYSFTMFLKNSCAVICAEHIFGVGTKVAYLENLLKITRIALDSPTLGRWVMKSRDTLSQGLDGTGRGSSKPAILVLSTLSCWQMRQVLVY

PKI59748.1 hypothetical protein CRG98_019851 [Punica granatum]4.7e-0737.84Show/hide
Query:  FTMFLKNSCAVICAEHIFGVGTKVAYLENLLKITRIALDSPTLGRWVMKSRDTLSQGLDGTGRGSSKPAILVLSTLSCWQMRQVLVYCITSFRKRALMAS
        FT     S A   AE    VG  +AYLENL  +T        LG   +KS +TL  G   TGRGS  PA      LSCW +R V  Y   S   R +++S
Subjt:  FTMFLKNSCAVICAEHIFGVGTKVAYLENLLKITRIALDSPTLGRWVMKSRDTLSQGLDGTGRGSSKPAILVLSTLSCWQMRQVLVYCITSFRKRALMAS

Query:  QTDPINLLAFR
        +  P  L+  R
Subjt:  QTDPINLLAFR

TrEMBL top hitse value%identityAlignment
A0A2G2XSG0 Uncharacterized protein1.0e-0742.11Show/hide
Query:  MLSGTPYSFTMFLKNSCAVICAEHIFGVGTKVAYLENLLKITRIALDSPTLGRWVMKSRDTLSQGLDGTGRGSSKPAILVLSTLSCWQMRQVLVY
        M  G P S T  L+N+     A  +      VAYLE     T I      LG+ V+KS  TLS     TG GSS P   + STLSCWQ RQV  Y
Subjt:  MLSGTPYSFTMFLKNSCAVICAEHIFGVGTKVAYLENLLKITRIALDSPTLGRWVMKSRDTLSQGLDGTGRGSSKPAILVLSTLSCWQMRQVLVY

A0A2I0JTX5 Uncharacterized protein2.3e-0737.84Show/hide
Query:  FTMFLKNSCAVICAEHIFGVGTKVAYLENLLKITRIALDSPTLGRWVMKSRDTLSQGLDGTGRGSSKPAILVLSTLSCWQMRQVLVYCITSFRKRALMAS
        FT     S A   AE    VG  +AYLENL  +T        LG   +KS +TL  G   TGRGS  PA      LSCW +R V  Y   S   R +++S
Subjt:  FTMFLKNSCAVICAEHIFGVGTKVAYLENLLKITRIALDSPTLGRWVMKSRDTLSQGLDGTGRGSSKPAILVLSTLSCWQMRQVLVYCITSFRKRALMAS

Query:  QTDPINLLAFR
        +  P  L+  R
Subjt:  QTDPINLLAFR

A0A2P6SMM0 Uncharacterized protein1.9e-0655.56Show/hide
Query:  SPTLGRWVMKSRDTLSQGLDGTGRGSSKPAILVLSTLSCWQMRQVLVYCITSFR
        SPT GR V+KSR+TLS G  G   GS+ P +   S LSCW ++QVLVY +TS R
Subjt:  SPTLGRWVMKSRDTLSQGLDGTGRGSSKPAILVLSTLSCWQMRQVLVYCITSFR

A0A5A7SMR7 Uncharacterized protein3.4e-1147.47Show/hide
Query:  MLSGTPYSFTMFLKNSCAVICAEHIFGVGTKVAYLENLLKITRIALDSPTLGRWVMKSRDTLSQGLDGTGRGSSKPAILVLSTLSCWQMRQVLVYCITS
        ML  T ++FT  LKNSC V  AE    VG K AY EN   ITR+   S T  R V+KS +T S GL   G+G +  A     TLSCWQMR V  Y + S
Subjt:  MLSGTPYSFTMFLKNSCAVICAEHIFGVGTKVAYLENLLKITRIALDSPTLGRWVMKSRDTLSQGLDGTGRGSSKPAILVLSTLSCWQMRQVLVYCITS

A0A5A7UG58 Uncharacterized protein5.3e-1259.15Show/hide
Query:  MLSGTPYSFTMFLKNSCAVICAEHIFGVGTKVAYLENLLKITRIALDSPTLGRWVMKSRDTLSQGLDGTGR
        ML GTP++FT  LKN+CAV  AEH      KVAY EN   +T+IA+  P LGRWVMKS +TLSQG  GTG+
Subjt:  MLSGTPYSFTMFLKNSCAVICAEHIFGVGTKVAYLENLLKITRIALDSPTLGRWVMKSRDTLSQGLDGTGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTCGGGGACACCCTATAGTTTCACTATGTTCTTGAAGAATAGCTGTGCTGTCATCTGTGCGGAACACATCTTCGGAGTTGGGACAAAGGTTGCATATTTGGAGAA
TCTGTTGAAAATAACAAGGATAGCTTTGGATTCTCCAACCTTGGGCAGGTGGGTGATGAAGTCCAGGGATACGCTCTCCCAAGGCCTTGATGGCACTGGAAGGGGCTCTA
GTAAGCCCGCAATTTTAGTCCTCTCGACTTTGTCTTGTTGGCAGATGAGACAAGTCTTGGTGTATTGCATAACATCGTTTCGCAAGCGTGCCTTGATGGCTTCACAAACA
GACCCCATCAACTTGCTTGCTTTCAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTTCGGGGACACCCTATAGTTTCACTATGTTCTTGAAGAATAGCTGTGCTGTCATCTGTGCGGAACACATCTTCGGAGTTGGGACAAAGGTTGCATATTTGGAGAA
TCTGTTGAAAATAACAAGGATAGCTTTGGATTCTCCAACCTTGGGCAGGTGGGTGATGAAGTCCAGGGATACGCTCTCCCAAGGCCTTGATGGCACTGGAAGGGGCTCTA
GTAAGCCCGCAATTTTAGTCCTCTCGACTTTGTCTTGTTGGCAGATGAGACAAGTCTTGGTGTATTGCATAACATCGTTTCGCAAGCGTGCCTTGATGGCTTCACAAACA
GACCCCATCAACTTGCTTGCTTTCAGATGA
Protein sequenceShow/hide protein sequence
MLSGTPYSFTMFLKNSCAVICAEHIFGVGTKVAYLENLLKITRIALDSPTLGRWVMKSRDTLSQGLDGTGRGSSKPAILVLSTLSCWQMRQVLVYCITSFRKRALMASQT
DPINLLAFR