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Moc10g12360 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g12360
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr10:9392993..9393490
RNA-Seq ExpressionMoc10g12360
SyntenyMoc10g12360
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0071704 - organic substance metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051442.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]3.1e-3347.37Show/hide
Query:  MTAEEKETMEELAYGTIILNLSDNIMRQVIDFKTAYEIWNKLDTIFLSKDLPNKAYLGEIFFTYKMENSISLSENLNEFKKISSNFKNPGEKIRDENEAF
        +T  E+ET+EE+AY T+I+N++DN++RQVI+  TA+  W KL +++  KDLPNK ++ E  F++K   + +L ENL+EFKK+++     GEK+  ENEA 
Subjt:  MTAEEKETMEELAYGTIILNLSDNIMRQVIDFKTAYEIWNKLDTIFLSKDLPNKAYLGEIFFTYKMENSISLSENLNEFKKISSNFKNPGEKIRDENEAF

Query:  ILLNSLLEAYKEDKVALKYGRESITTYGIVSTVKTKELELMETKRKNYSAEG
        IL+NS+ + YKE K  LKYGRE+IT   +++T+K+KELEL    + + +AEG
Subjt:  ILLNSLLEAYKEDKVALKYGRESITTYGIVSTVKTKELELMETKRKNYSAEG

XP_038880370.1 uncharacterized protein LOC120072018 [Benincasa hispida]4.8e-3459.52Show/hide
Query:  MTAEEKETMEELAYGTIILNLSDNIMRQVIDFKTAYEIWNKLDTIFLSKDLPNKAYLGEIFFTYKMENSISLSENLNEFKKISSNFKNPGEKIRDENEAF
        ++  +KET+E  AYGTIILN++D+I+RQ++D  TAY +WNKL+ I+L+KDLPNKA+  E FFTYK++ + SL++NLNEFK++SS F++  + IR+ENEAF
Subjt:  MTAEEKETMEELAYGTIILNLSDNIMRQVIDFKTAYEIWNKLDTIFLSKDLPNKAYLGEIFFTYKMENSISLSENLNEFKKISSNFKNPGEKIRDENEAF

Query:  ILLNSLLEAYKEDKVALKYGRESITT
        ILLNSL E++K+ K  LKYGRE ITT
Subjt:  ILLNSLLEAYKEDKVALKYGRESITT

XP_038885928.1 uncharacterized protein LOC120076236 [Benincasa hispida]6.7e-4460.26Show/hide
Query:  EKETMEELAYGTIILNLSDNIMRQVIDFKTAYEIWNKLDTIFLSKDLPNKAYLGEIFFTYKMENSISLSENLNEFKKISSNFKNPGEKIRDENEAFILLN
        EKET+E  AYGTI+LN+ D+++RQ++D  TAY +WNKL+ I+L+KDLPNKA+L E FFTYKM+ + SL++NLNEFK +SS+F++ G+ I +ENEAFILLN
Subjt:  EKETMEELAYGTIILNLSDNIMRQVIDFKTAYEIWNKLDTIFLSKDLPNKAYLGEIFFTYKMENSISLSENLNEFKKISSNFKNPGEKIRDENEAFILLN

Query:  SLLEAYKEDKVALKYGRESITTYGIVSTVKTKELELMETKRKNYSAEGHFAKGKYK
        SL E +K+ K ALKYGRE ITTY I+S V  KELEL  TK+     EG F KG  K
Subjt:  SLLEAYKEDKVALKYGRESITTYGIVSTVKTKELELMETKRKNYSAEGHFAKGKYK

XP_038887098.1 uncharacterized protein LOC120077280 [Benincasa hispida]3.9e-3656.43Show/hide
Query:  MTAEEKETMEELAYGTIILNLSDNIMRQVIDFKTAYEIWNKLDTIFLSKDLPNKAYLGEIFFTYKMENSISLSENLNEFKKISSNFKNPGEKIRDENEAF
        ++  EKET+E  AYGTIILN++D+++RQ++D  T Y +WNKL+ I+L+KD PNK +L E FFTYKM+ + SL++NLNEFK++SS F++ G+ I +ENEAF
Subjt:  MTAEEKETMEELAYGTIILNLSDNIMRQVIDFKTAYEIWNKLDTIFLSKDLPNKAYLGEIFFTYKMENSISLSENLNEFKKISSNFKNPGEKIRDENEAF

Query:  ILLNSLLEAYKEDKVALKYGRESITTYGIVSTVKTKELEL
        IL NSL E +K+ K ALKY R+ IT   I+S V+ KELEL
Subjt:  ILLNSLLEAYKEDKVALKYGRESITTYGIVSTVKTKELEL

XP_038890043.1 uncharacterized protein LOC120079747 [Benincasa hispida]4.1e-4156.71Show/hide
Query:  MTAEEKETMEELAYGTIILNLSDNIMRQVIDFKTAYEIWNKLDTIFLSKDLPNKAYLGEIFFTYKMENSISLSENLNEFKKISSNFKNPGEKIRDENEAF
        +T  EKET+E  A GTI+LN++DN++RQVI+  TAY +WNKL+ I+L+KDL NKA+L E FFTYKM+ + SL++ LNEFK++SS F++ G  I +ENEAF
Subjt:  MTAEEKETMEELAYGTIILNLSDNIMRQVIDFKTAYEIWNKLDTIFLSKDLPNKAYLGEIFFTYKMENSISLSENLNEFKKISSNFKNPGEKIRDENEAF

Query:  ILLNSLLEAYKEDKVALKYGRESITTYGIVSTVKTKELELMETKRKNYSAEGHFAKGKYKNKWK
        ILLNSL E++K+ K A+KYGRE ITT  I+S V+ +ELEL  +K+     EG F+KGK KN  K
Subjt:  ILLNSLLEAYKEDKVALKYGRESITTYGIVSTVKTKELELMETKRKNYSAEGHFAKGKYKNKWK

TrEMBL top hitse value%identityAlignment
A0A5A7U6R2 Retrovirus-related Pol polyprotein from transposon TNT 1-941.5e-3347.37Show/hide
Query:  MTAEEKETMEELAYGTIILNLSDNIMRQVIDFKTAYEIWNKLDTIFLSKDLPNKAYLGEIFFTYKMENSISLSENLNEFKKISSNFKNPGEKIRDENEAF
        +T  E+ET+EE+AY T+I+N++DN++RQVI+  TA+  W KL +++  KDLPNK ++ E  F++K   + +L ENL+EFKK+++     GEK+  ENEA 
Subjt:  MTAEEKETMEELAYGTIILNLSDNIMRQVIDFKTAYEIWNKLDTIFLSKDLPNKAYLGEIFFTYKMENSISLSENLNEFKKISSNFKNPGEKIRDENEAF

Query:  ILLNSLLEAYKEDKVALKYGRESITTYGIVSTVKTKELELMETKRKNYSAEG
        IL+NS+ + YKE K  LKYGRE+IT   +++T+K+KELEL    + + +AEG
Subjt:  ILLNSLLEAYKEDKVALKYGRESITTYGIVSTVKTKELELMETKRKNYSAEG

A0A5C7GXL9 Sucrose-phosphate phosphatase3.2e-3149.66Show/hide
Query:  MTAEEKETMEELAYGTIILNLSDNIMRQVIDFKTAYEIWNKLDTIFLSKDLPNKAYLGEIFFTYKMENSISLSENLNEFKKISSNFKNPG--EKIRDENE
        +T E+K+ M E+A GTIILNLSDN++R++ D KTA ++W KL++++L+K L NK YL E  F +KM+ S  L +NL++FKK++    N G  EK+ DENE
Subjt:  MTAEEKETMEELAYGTIILNLSDNIMRQVIDFKTAYEIWNKLDTIFLSKDLPNKAYLGEIFFTYKMENSISLSENLNEFKKISSNFKNPG--EKIRDENE

Query:  AFILLNSLLEAYKEDKVALKYGRESITTYGIVSTVKTKELELMETKRKN
        A ILLNSL +++K+ K A+KYGR S++    +S +K+KELEL   K+ N
Subjt:  AFILLNSLLEAYKEDKVALKYGRESITTYGIVSTVKTKELELMETKRKN

A0A5C7HB65 gag_pre-integrs domain-containing protein1.4e-3148.12Show/hide
Query:  MTAEEKETMEELAYGTIILNLSDNIMRQVIDFKTAYEIWNKLDTIFLSKDLPNKAYLGEIFFTYKMENSISLSENLNEFKKISSNFKNPG--EKIRDENE
        +T E+K+ M E+A GTIILNLSDN++R++ D KTA ++W KL++++L+K L NK YL E  F +KM+ S  L +NL++FKK++    N G  EK+ DENE
Subjt:  MTAEEKETMEELAYGTIILNLSDNIMRQVIDFKTAYEIWNKLDTIFLSKDLPNKAYLGEIFFTYKMENSISLSENLNEFKKISSNFKNPG--EKIRDENE

Query:  AFILLNSLLEAYKEDKVALKYGRESITTYGIVSTVKTKELELMETKRKNYSAEGHFAKGK
        A ILLNSL +++K+ K A+KYGR S++    +S +K+KELEL   K+ N   E  F +G+
Subjt:  AFILLNSLLEAYKEDKVALKYGRESITTYGIVSTVKTKELELMETKRKNYSAEGHFAKGK

A0A5D3CAI4 Retrovirus-related Pol polyprotein from transposon TNT 1-941.8e-3159.17Show/hide
Query:  IWNKLDTIFLSKDLPNKAYLGEIFFTYKMENSISLSENLNEFKKISSNFKNPGEKIRDENEAFILLNSLLEAYKEDKVALKYGRESITTYGIVSTVKTKE
        +W KLD ++ SKDLPN+AY+ E FFT+KM+++ SL ENL EFKK+SS+FK  G+KI DENE+FILLNSL EAYKE K+AL+YGR+ ITT G++S ++T+E
Subjt:  IWNKLDTIFLSKDLPNKAYLGEIFFTYKMENSISLSENLNEFKKISSNFKNPGEKIRDENEAFILLNSLLEAYKEDKVALKYGRESITTYGIVSTVKTKE

Query:  LELMETKRKNYSAEGHFAKG
        L+L   +R   + EG F+KG
Subjt:  LELMETKRKNYSAEGHFAKG

A0A5D3DNU1 Putative gag-pol polyprotein1.4e-3147.88Show/hide
Query:  MTAEEKETMEELAYGTIILNLSDNIMRQVIDFKTAYEIWNKLDTIFLSKDLPNKAYLGEIFFTYKMENSISLSENLNEFKKISSNFKNPGEKIRDENEAF
        +T  EK  M+E+AY TI+L LSD ++R V +  T  E+W KL++++L+K LPNK Y+ E FF YKM+ S SL ENL+EF+KI  +  N GEK+ DEN+A 
Subjt:  MTAEEKETMEELAYGTIILNLSDNIMRQVIDFKTAYEIWNKLDTIFLSKDLPNKAYLGEIFFTYKMENSISLSENLNEFKKISSNFKNPGEKIRDENEAF

Query:  ILLNSLLEAYKEDKVALKYGRESITTYGIVSTVKTKELELMETKRKNYSAEGHFAKGKYKNK-WK
        ILLNSL E Y+E K A+KYGR+S+T   ++  +KT+ LE+   K++    E   A+G+ + K WK
Subjt:  ILLNSLLEAYKEDKVALKYGRESITTYGIVSTVKTKELELMETKRKNYSAEGHFAKGKYKNK-WK

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.3e-1329.12Show/hide
Query:  MTAEEKETMEELAYGTIILNLSDNIMRQVIDFKTAYEIWNKLDTIFLSKDLPNKAYLGEIFFTYKMENSISLSENLNEFKKISSNFKNPGEKIRDENEAF
        M AE+   ++E A   I L+LSD+++  +ID  TA  IW +L+++++SK L NK YL +  +   M    +   +LN F  + +   N G KI +E++A 
Subjt:  MTAEEKETMEELAYGTIILNLSDNIMRQVIDFKTAYEIWNKLDTIFLSKDLPNKAYLGEIFFTYKMENSISLSENLNEFKKISSNFKNPGEKIRDENEAF

Query:  ILLNSLLEAYKEDKVALKYGRESITTYGIVSTVKTKEL------------------ELMETKRKNYSAEGHFAKGKYKNKWK
        +LLNSL  +Y      + +G+ +I    + S +   E                      +    NY   G  A+GK KN+ K
Subjt:  ILLNSLLEAYKEDKVALKYGRESITTYGIVSTVKTKEL------------------ELMETKRKNYSAEGHFAKGKYKNKWK

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGCCGAAGAAAAAGAAACCATGGAGGAGCTAGCTTATGGAACGATTATCCTTAATCTCAGTGATAATATTATGCGACAGGTAATCGACTTCAAAACAGCT
TATGAAATCTGGAACAAATTAGATACCATTTTTCTTTCAAAAGACCTACCTAACAAGGCTTATTTGGGAGAAATATTTTTCACTTACAAAATGGAAAATTCAATA
TCTCTAAGTGAGAATCTCAATGAATTCAAGAAGATATCTTCAAATTTCAAGAACCCTGGAGAGAAAATAAGAGATGAAAACGAGGCATTCATCTTGCTGAATTCA
CTTCTAGAGGCATATAAAGAAGACAAAGTAGCATTAAAATATGGCAGAGAATCAATAACTACATATGGCATAGTATCAACCGTCAAAACAAAAGAATTGGAACTG
ATGGAGACAAAAAGGAAAAATTACAGTGCAGAGGGACACTTCGCTAAAGGCAAGTATAAGAATAAATGGAAGGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGACTGCCGAAGAAAAAGAAACCATGGAGGAGCTAGCTTATGGAACGATTATCCTTAATCTCAGTGATAATATTATGCGACAGGTAATCGACTTCAAAACAGCT
TATGAAATCTGGAACAAATTAGATACCATTTTTCTTTCAAAAGACCTACCTAACAAGGCTTATTTGGGAGAAATATTTTTCACTTACAAAATGGAAAATTCAATA
TCTCTAAGTGAGAATCTCAATGAATTCAAGAAGATATCTTCAAATTTCAAGAACCCTGGAGAGAAAATAAGAGATGAAAACGAGGCATTCATCTTGCTGAATTCA
CTTCTAGAGGCATATAAAGAAGACAAAGTAGCATTAAAATATGGCAGAGAATCAATAACTACATATGGCATAGTATCAACCGTCAAAACAAAAGAATTGGAACTG
ATGGAGACAAAAAGGAAAAATTACAGTGCAGAGGGACACTTCGCTAAAGGCAAGTATAAGAATAAATGGAAGGAATAA
Protein sequenceShow/hide protein sequence
MTAEEKETMEELAYGTIILNLSDNIMRQVIDFKTAYEIWNKLDTIFLSKDLPNKAYLGEIFFTYKMENSISLSENLNEFKKISSNFKNPGEKIRDENEAFILLNS
LLEAYKEDKVALKYGRESITTYGIVSTVKTKELELMETKRKNYSAEGHFAKGKYKNKWKE