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Moc10g12640 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g12640
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionpolyubiquitin-like
Genome locationchr10:9581907..9582276
RNA-Seq ExpressionMoc10g12640
SyntenyMoc10g12640
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR019956 - Ubiquitin domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD6225216.1 unnamed protein product [Miscanthus lutarioriparius]3.3e-0544.29Show/hide
Query:  KDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV
        K+KM+I ++    K V L V R   +A++KAKI  +EGIP  Q+ L F G++LED  TLADY I+ ++ +
Subjt:  KDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV

CAE8715441.1 unnamed protein product, partial [Polarella glacialis]5.6e-0540.85Show/hide
Query:  PKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV
        P   ++I ++    K++ L V     I D+KAKI  +EGIP  Q++L F+GR+LED  TL+DY I+ +N +
Subjt:  PKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV

KAG2582037.1 hypothetical protein PVAP13_6KG092800 [Panicum virgatum]5.1e-0644.44Show/hide
Query:  RPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV
        RP D M+I L+    K   L V   Y IA++KAKI  +EGIP+ Q+ L F  + LED +TLADY I+ ++++
Subjt:  RPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV

XP_008463442.1 PREDICTED: polyubiquitin-like [Cucumis melo]2.1e-0746.34Show/hide
Query:  MNDKLRRKWLIRKLRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRS
        M+ KLRRKWLI+KLRP+ +M+I ++    + + L V     I D+KAKI A+EG P QQ+ L F G +L+D  TL   G+ S
Subjt:  MNDKLRRKWLIRKLRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRS

XP_022154970.1 ubiquitin-like isoform X1 [Momordica charantia]1.1e-0538.64Show/hide
Query:  MNDKLRRKWLIRKLRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVVCM
        ++ KLR++WL+R L    +M+I +++   K +   +     I  +KAKI A EG P  Q+ L + GR+LED  TLA+Y IRS + + M
Subjt:  MNDKLRRKWLIRKLRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVVCM

TrEMBL top hitse value%identityAlignment
A0A0D2VG82 Uncharacterized protein6.1e-0541.89Show/hide
Query:  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVVC
        LR +  M+I ++    K + L V     I ++KAKI  +EGIP  Q+ L F G++LED  TLADY I+ +N +C
Subjt:  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVVC

A0A1S3CKU5 polyubiquitin-like1.0e-0746.34Show/hide
Query:  MNDKLRRKWLIRKLRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRS
        M+ KLRRKWLI+KLRP+ +M+I ++    + + L V     I D+KAKI A+EG P QQ+ L F G +L+D  TL   G+ S
Subjt:  MNDKLRRKWLIRKLRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRS

A0A5D3BMH5 Polyubiquitin-like1.0e-0746.34Show/hide
Query:  MNDKLRRKWLIRKLRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRS
        M+ KLRRKWLI+KLRP+ +M+I ++    + + L V     I D+KAKI A+EG P QQ+ L F G +L+D  TL   G+ S
Subjt:  MNDKLRRKWLIRKLRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRS

A0A6J1DL46 ubiquitin-like isoform X15.5e-0638.64Show/hide
Query:  MNDKLRRKWLIRKLRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVVCM
        ++ KLR++WL+R L    +M+I +++   K +   +     I  +KAKI A EG P  Q+ L + GR+LED  TLA+Y IRS + + M
Subjt:  MNDKLRRKWLIRKLRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVVCM

S5G9A4 Ac-v-ubi8.0e-0539.13Show/hide
Query:  MKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVVCM
        M+I ++    K +         +ADLK KIA +EG+P+ Q+ L F G++LEDS+T+ADY I+ ++ + M
Subjt:  MKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVVCM

SwissProt top hitse value%identityAlignment
P0CG71 Polyubiquitin-A2.4e-0639.73Show/hide
Query:  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV
        LR +  M+I ++  I K + L V     I ++KAKI  +EGIP  Q+ L F G++LED  TL+DY I+ ++ +
Subjt:  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV

P0CH27 Ubiquitin-60S ribosomal protein L404.1e-0639.73Show/hide
Query:  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV
        LR +  M+I ++    K + L V     I ++KAKI  +EGIP  Q+ L F G++LED  TLADY I+ ++ +
Subjt:  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV

P16709 viral Ubiquitin2.2e-0739.13Show/hide
Query:  MKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVVCM
        M+I ++    K +         +ADLK KIA +EG+P+ Q+ L F G++LEDS+T+ADY I+ ++ + M
Subjt:  MKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVVCM

P69315 Polyubiquitin (Fragment)2.4e-0641.1Show/hide
Query:  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV
        LR +  M+I L+    K + L V     I ++KAKI  +EGIP  Q+ L F G++LED  TLADY I+ ++ +
Subjt:  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV

Q3E7K8 Polyubiquitin 123.1e-0641.1Show/hide
Query:  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV
        LR +  M+I ++    K + L V     I +LKAKI  +EGIP  Q+ L F G++LED  TLADY I+ ++ +
Subjt:  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV

Arabidopsis top hitse value%identityAlignment
AT1G53930.1 Ubiquitin-like superfamily protein9.9e-0840.3Show/hide
Query:  MKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV
        M I ++    + +VL V     I ++KAKI  ++GIP+ Q+ L F+G++LED  TLADY I++D+++
Subjt:  MKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV

AT1G55060.1 ubiquitin 122.2e-0741.1Show/hide
Query:  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV
        LR +  M+I ++    K + L V     I +LKAKI  +EGIP  Q+ L F G++LED  TLADY I+ ++ +
Subjt:  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV

AT4G02890.1 Ubiquitin family protein3.8e-0739.73Show/hide
Query:  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV
        LR +  M+I ++    K + L V     I ++KAKI  +EGIP  Q+ L F G++LED  TLADY I+ ++ +
Subjt:  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV

AT4G05050.1 ubiquitin 113.8e-0739.73Show/hide
Query:  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV
        LR +  M+I ++    K + L V     I ++KAKI  +EGIP  Q+ L F G++LED  TLADY I+ ++ +
Subjt:  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV

AT4G05320.2 polyubiquitin 103.8e-0739.73Show/hide
Query:  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV
        LR +  M+I ++    K + L V     I ++KAKI  +EGIP  Q+ L F G++LED  TLADY I+ ++ +
Subjt:  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGACAAATTGCGAAGAAAATGGTTGATACGGAAACTTCGTCCCAAGGACAAGATGAAGATTTGTTTGAGAGTGGCCATAAACAAGGTAGTTGTTCTATGGGTTTG
GAGATTGTATATGATCGCGGATTTGAAGGCTAAAATTGCAGCAGAAGAAGGTATTCCCATTCAACAAAAAGTCTTGAATTTCCAAGGACGTAGGCTTGAAGATAGCGAAA
CTCTAGCAGACTATGGCATCAGAAGCGATAATGTTGTGTGCATGTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATGACAAATTGCGAAGAAAATGGTTGATACGGAAACTTCGTCCCAAGGACAAGATGAAGATTTGTTTGAGAGTGGCCATAAACAAGGTAGTTGTTCTATGGGTTTG
GAGATTGTATATGATCGCGGATTTGAAGGCTAAAATTGCAGCAGAAGAAGGTATTCCCATTCAACAAAAAGTCTTGAATTTCCAAGGACGTAGGCTTGAAGATAGCGAAA
CTCTAGCAGACTATGGCATCAGAAGCGATAATGTTGTGTGCATGTTTTAG
Protein sequenceShow/hide protein sequence
MNDKLRRKWLIRKLRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVVCMF