; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc10g12860 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g12860
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUbiquitin family protein
Genome locationchr10:9772068..9774566
RNA-Seq ExpressionMoc10g12860
SyntenyMoc10g12860
Gene Ontology termsGO:0005622 - intracellular (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR019956 - Ubiquitin domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PHJ18160.1 ubiquitin-60s ribosomal protein l40 isoform x1 [Cystoisospora suis]8.1e-0950Show/hide
Query:  MCGQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHLFVTDQS
        + G+   LDV P+DTI  VKAKI  ++G   D QRL F  K L+D RTL++YN+Q +S LHLF + +S
Subjt:  MCGQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHLFVTDQS

RYF39137.1 IPTL-CTERM sorting domain-containing protein, partial [Comamonadaceae bacterium]1.8e-0840.7Show/hide
Query:  MCGQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHLFVTDQSLLGTNQGSTPTTPITSNI
        + G+   L+V P+D+I  VK+KI  ++G   D QRL F  K L+D RTLA+YN+Q +S LHL +     + T + +T T  IT+ +
Subjt:  MCGQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHLFVTDQSLLGTNQGSTPTTPITSNI

SFQ52505.1 Ubiquitin family protein, partial [Lachnospiraceae bacterium XBB1006]1.2e-0944.44Show/hide
Query:  GQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHLFVTDQSLLGTNQ-GSTPTTPITSNIFLAPTKTSSMIVLG
        G+   LDV P+DTI  VKAKI  ++G   D QRL F  K L+D+RTLA+YN+Q +S LHL V+D  +  T + G  PT         APT  + +I  G
Subjt:  GQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHLFVTDQSLLGTNQ-GSTPTTPITSNIFLAPTKTSSMIVLG

WP_107173700.1 ubiquitin family protein [Acidovorax avenae]1.8e-0840.7Show/hide
Query:  MCGQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHLFVTDQSLLGTNQGSTPTTPITSNI
        + G+   LDV P+D+I  VKAKI  +KG   + QRL F  K L+D RTL++YN+Q +S +HL +     + T   +T T  IT+ +
Subjt:  MCGQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHLFVTDQSLLGTNQGSTPTTPITSNI

XP_023520422.1 polyubiquitin-like [Cucurbita pepo subsp. pepo]1.1e-0858.33Show/hide
Query:  GQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHL
        G    LDVLP+DTI  VKAKI  + G   D  RL F  KILDD RT+A YN+Q DSA+HL
Subjt:  GQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHL

TrEMBL top hitse value%identityAlignment
A0A1I5Z802 Ubiquitin family protein (Fragment)6.0e-1044.44Show/hide
Query:  GQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHLFVTDQSLLGTNQ-GSTPTTPITSNIFLAPTKTSSMIVLG
        G+   LDV P+DTI  VKAKI  ++G   D QRL F  K L+D+RTLA+YN+Q +S LHL V+D  +  T + G  PT         APT  + +I  G
Subjt:  GQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHLFVTDQSLLGTNQ-GSTPTTPITSNIFLAPTKTSSMIVLG

A0A2C6KBF5 Ubiquitin3.9e-0950Show/hide
Query:  MCGQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHLFVTDQS
        + G+   LDV P+DTI  VKAKI  ++G   D QRL F  K L+D RTL++YN+Q +S LHLF + +S
Subjt:  MCGQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHLFVTDQS

A0A2R4E3V4 IPTL-CTERM sorting domain-containing protein8.7e-0940.7Show/hide
Query:  MCGQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHLFVTDQSLLGTNQGSTPTTPITSNI
        + G+   LDV P+D+I  VKAKI  +KG   + QRL F  K L+D RTL++YN+Q +S +HL +     + T   +T T  IT+ +
Subjt:  MCGQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHLFVTDQSLLGTNQGSTPTTPITSNI

A0A4Q3N5H0 IPTL-CTERM sorting domain-containing protein (Fragment)8.7e-0940.7Show/hide
Query:  MCGQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHLFVTDQSLLGTNQGSTPTTPITSNI
        + G+   L+V P+D+I  VK+KI  ++G   D QRL F  K L+D RTLA+YN+Q +S LHL +     + T + +T T  IT+ +
Subjt:  MCGQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHLFVTDQSLLGTNQGSTPTTPITSNI

W5P3M9 60S ribosomal protein L401.1e-0853.23Show/hide
Query:  MCGQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHL
        + G+   L+V P+DTI +VKAKI  E+G   D QRL F SK L+D RTL++YN+Q +S LHL
Subjt:  MCGQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHL

SwissProt top hitse value%identityAlignment
P18101 Ubiquitin-60S ribosomal protein L405.8e-1050Show/hide
Query:  MCGQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHL
        + G+   L+V P+DTI  VKAKI  ++G   D QRL F  K L+D RTL++YN+Q +S LHL
Subjt:  MCGQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHL

P46575 Ubiquitin-60S ribosomal protein L402.0e-1051.61Show/hide
Query:  MCGQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHL
        + G+   LDV P+DTI  VKAKI  ++G   D QRL F  K L+D RTL++YN+Q +S LHL
Subjt:  MCGQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHL

P63048 Ubiquitin-60S ribosomal protein L405.8e-1050Show/hide
Query:  MCGQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHL
        + G+   L+V P+DTI  VKAKI  ++G   D QRL F  K L+D RTL++YN+Q +S LHL
Subjt:  MCGQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHL

P63050 Ubiquitin-60S ribosomal protein L405.8e-1050Show/hide
Query:  MCGQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHL
        + G+   L+V P+DTI  VKAKI  ++G   D QRL F  K L+D RTL++YN+Q +S LHL
Subjt:  MCGQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHL

P63052 Ubiquitin-60S ribosomal protein L405.8e-1050Show/hide
Query:  MCGQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHL
        + G+   L+V P+DTI  VKAKI  ++G   D QRL F  K L+D RTL++YN+Q +S LHL
Subjt:  MCGQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHL

Arabidopsis top hitse value%identityAlignment
AT1G23410.1 Ribosomal protein S27a / Ubiquitin family protein2.0e-1050Show/hide
Query:  MCGQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHL
        + G+   L+V  +DTI  VKAKI  ++G   D QRL F  K L+D RTLA+YN+Q +S LHL
Subjt:  MCGQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHL

AT1G31340.1 related to ubiquitin 12.0e-1050Show/hide
Query:  MCGQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHL
        + G+   L+V  +DTI  VKAKI  ++G   D QRL F  K L+D RTLA+YN+Q +S LHL
Subjt:  MCGQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHL

AT1G53930.1 Ubiquitin-like superfamily protein1.6e-1051.61Show/hide
Query:  MCGQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHL
        + G+R  L+V   DTI  +KAKI  ++G  VD QRL F  K L+D  TLA+YN+Q DS LHL
Subjt:  MCGQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHL

AT2G47110.1 ubiquitin 62.0e-1050Show/hide
Query:  MCGQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHL
        + G+   L+V  +DTI  VKAKI  ++G   D QRL F  K L+D RTLA+YN+Q +S LHL
Subjt:  MCGQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHL

AT5G37640.1 ubiquitin 91.6e-1045.12Show/hide
Query:  LDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHLFVT----DQSLLGTNQGSTPTTPITSN
        +DV+ +DTI  VKAKI   +G  +D QRL F  K+LDD RTLA+Y++Q DS LHL +      Q  + T  G T T  + S+
Subjt:  LDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHLFVT----DQSLLGTNQGSTPTTPITSN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCGGGCAGAGATTCGGTTTAGATGTTCTACCGACGGACACGATTGCTGCTGTGAAGGCTAAAATACACAGGGAAAAGGGTTTTGGTGTGGACACTCAACGGCTCAC
TTTTGGAAGCAAAATTCTGGACGATCATCGAACTCTCGCAGAGTATAACGTGCAGGCAGACTCAGCATTGCATCTGTTTGTAACTGATCAAAGTCTTCTTGGCACCAACC
AAGGCTCAACTCCAACTACACCGATAACTTCCAACATCTTCTTGGCACCGACCAAGACTTCATCTATGATTGTCTTGGGATTGCACAATCTTACGTGGTCTTGTCCCCCA
GACGTTAGAGACATAGCACGTACTCCCACTCGATCTAAGTGGTCCTGGGACGTTTCCTTCTTCACTCGCACCCAACGAATTTTGAAGAAAGATCTCCACTCTAATGACTT
AACACTCCCACCTAAGTCTGTTGCCACTATAGAGACATCACTCTTGACTTTAGCACCCACTGTAGTCTTCCCTGCACTATTTCACCTAAGCTGCTTCATCAGCTCACTAA
ACCGTCTGACAACTGAGGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCGGGCAGAGATTCGGTTTAGATGTTCTACCGACGGACACGATTGCTGCTGTGAAGGCTAAAATACACAGGGAAAAGGGTTTTGGTGTGGACACTCAACGGCTCAC
TTTTGGAAGCAAAATTCTGGACGATCATCGAACTCTCGCAGAGTATAACGTGCAGGCAGACTCAGCATTGCATCTGTTTGTAACTGATCAAAGTCTTCTTGGCACCAACC
AAGGCTCAACTCCAACTACACCGATAACTTCCAACATCTTCTTGGCACCGACCAAGACTTCATCTATGATTGTCTTGGGATTGCACAATCTTACGTGGTCTTGTCCCCCA
GACGTTAGAGACATAGCACGTACTCCCACTCGATCTAAGTGGTCCTGGGACGTTTCCTTCTTCACTCGCACCCAACGAATTTTGAAGAAAGATCTCCACTCTAATGACTT
AACACTCCCACCTAAGTCTGTTGCCACTATAGAGACATCACTCTTGACTTTAGCACCCACTGTAGTCTTCCCTGCACTATTTCACCTAAGCTGCTTCATCAGCTCACTAA
ACCGTCTGACAACTGAGGCTTGA
Protein sequenceShow/hide protein sequence
MCGQRFGLDVLPTDTIAAVKAKIHREKGFGVDTQRLTFGSKILDDHRTLAEYNVQADSALHLFVTDQSLLGTNQGSTPTTPITSNIFLAPTKTSSMIVLGLHNLTWSCPP
DVRDIARTPTRSKWSWDVSFFTRTQRILKKDLHSNDLTLPPKSVATIETSLLTLAPTVVFPALFHLSCFISSLNRLTTEA