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Moc10g13260 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g13260
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr10:10111544..10113528
RNA-Seq ExpressionMoc10g13260
SyntenyMoc10g13260
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154103.1 uncharacterized protein LOC111021439 [Momordica charantia]2.3e-1467.14Show/hide
Query:  MDIDEQGQLKENWMSHLIKYLRDGILPTEKIEAQQLQRRAARYVLKDDNLEQK---RPETRQLKPEIIDW
        MDID+QGQ +ENW S LIKYL+DGILPTEKIEAQQLQ+RAARYVLKDDNL ++    P  + L P+  D+
Subjt:  MDIDEQGQLKENWMSHLIKYLRDGILPTEKIEAQQLQRRAARYVLKDDNLEQK---RPETRQLKPEIIDW

XP_022155342.1 uncharacterized protein LOC111022476 [Momordica charantia]2.1e-1583.02Show/hide
Query:  MDIDEQGQLKENWMSHLIKYLRDGILPTEKIEAQQLQRRAARYVLKDDNLEQK
        MDIDEQGQ ++NW SHLIKYLRDGILPTEKIEAQQLQRRA RY+LKDDNL ++
Subjt:  MDIDEQGQLKENWMSHLIKYLRDGILPTEKIEAQQLQRRAARYVLKDDNLEQK

XP_022156571.1 uncharacterized protein LOC111023448 [Momordica charantia]1.5e-1367.14Show/hide
Query:  MDIDEQGQLKENWMSHLIKYLRDGILPTEKIEAQQLQRRAARYVLKDDNLEQK---RPETRQLKPEIIDW
        MDID QGQ +EN  S LIKYL+DGILPTEKIEAQQLQRRAARYVLKDDNL ++    P  + L P+  D+
Subjt:  MDIDEQGQLKENWMSHLIKYLRDGILPTEKIEAQQLQRRAARYVLKDDNLEQK---RPETRQLKPEIIDW

XP_022158579.1 uncharacterized protein LOC111025033 [Momordica charantia]1.7e-1468.57Show/hide
Query:  MDIDEQGQLKENWMSHLIKYLRDGILPTEKIEAQQLQRRAARYVLKDDNLEQ---KRPETRQLKPEIIDW
        MDID QGQ +ENW S LIKYL+DGILPTEKIEAQQLQRRAARYVLKDDNL +     P  + L P+  D+
Subjt:  MDIDEQGQLKENWMSHLIKYLRDGILPTEKIEAQQLQRRAARYVLKDDNLEQ---KRPETRQLKPEIIDW

XP_022159204.1 uncharacterized protein LOC111025623 [Momordica charantia]7.3e-1375.47Show/hide
Query:  MDIDEQGQLKENWMSHLIKYLRDGILPTEKIEAQQLQRRAARYVLKDDNLEQK
        MDIDEQ Q +ENWMSHLIKYL+DGILP E IE QQLQR+AARYVLKD++L ++
Subjt:  MDIDEQGQLKENWMSHLIKYLRDGILPTEKIEAQQLQRRAARYVLKDDNLEQK

TrEMBL top hitse value%identityAlignment
A0A6J1DJC7 Ribonuclease H1.1e-1467.14Show/hide
Query:  MDIDEQGQLKENWMSHLIKYLRDGILPTEKIEAQQLQRRAARYVLKDDNLEQK---RPETRQLKPEIIDW
        MDID+QGQ +ENW S LIKYL+DGILPTEKIEAQQLQ+RAARYVLKDDNL ++    P  + L P+  D+
Subjt:  MDIDEQGQLKENWMSHLIKYLRDGILPTEKIEAQQLQRRAARYVLKDDNLEQK---RPETRQLKPEIIDW

A0A6J1DP30 uncharacterized protein LOC1110224761.0e-1583.02Show/hide
Query:  MDIDEQGQLKENWMSHLIKYLRDGILPTEKIEAQQLQRRAARYVLKDDNLEQK
        MDIDEQGQ ++NW SHLIKYLRDGILPTEKIEAQQLQRRA RY+LKDDNL ++
Subjt:  MDIDEQGQLKENWMSHLIKYLRDGILPTEKIEAQQLQRRAARYVLKDDNLEQK

A0A6J1DVC6 Ribonuclease H7.2e-1467.14Show/hide
Query:  MDIDEQGQLKENWMSHLIKYLRDGILPTEKIEAQQLQRRAARYVLKDDNLEQK---RPETRQLKPEIIDW
        MDID QGQ +EN  S LIKYL+DGILPTEKIEAQQLQRRAARYVLKDDNL ++    P  + L P+  D+
Subjt:  MDIDEQGQLKENWMSHLIKYLRDGILPTEKIEAQQLQRRAARYVLKDDNLEQK---RPETRQLKPEIIDW

A0A6J1DZU0 Ribonuclease H8.5e-1568.57Show/hide
Query:  MDIDEQGQLKENWMSHLIKYLRDGILPTEKIEAQQLQRRAARYVLKDDNLEQ---KRPETRQLKPEIIDW
        MDID QGQ +ENW S LIKYL+DGILPTEKIEAQQLQRRAARYVLKDDNL +     P  + L P+  D+
Subjt:  MDIDEQGQLKENWMSHLIKYLRDGILPTEKIEAQQLQRRAARYVLKDDNLEQ---KRPETRQLKPEIIDW

A0A6J1E1Q5 uncharacterized protein LOC1110256233.6e-1375.47Show/hide
Query:  MDIDEQGQLKENWMSHLIKYLRDGILPTEKIEAQQLQRRAARYVLKDDNLEQK
        MDIDEQ Q +ENWMSHLIKYL+DGILP E IE QQLQR+AARYVLKD++L ++
Subjt:  MDIDEQGQLKENWMSHLIKYLRDGILPTEKIEAQQLQRRAARYVLKDDNLEQK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATCGACGAGCAAGGGCAACTAAAAGAAAACTGGATGAGCCATTTGATCAAATATTTGAGAGATGGGATCTTGCCTACTGAAAAGATAGAGGCCCAGCAG
CTACAACGACGAGCAGCCAGATACGTTCTTAAAGACGACAATCTAGAACAAAAACGACCCGAGACGAGACAATTGAAGCCCGAGATCATCGACTGGGGGAGACCG
ACCCACGACGTAACGGGTCGGCCCAAAGGACGACCTAGAGACGAGGTCGTCATGGCGCCTCGGCGCCTACTTCTCAACAATCGCCTTCGGGCCAAGATACTATGT
GGGCCTCCTTCGCTCGGATCTACATCAGGAGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATATCGACGAGCAAGGGCAACTAAAAGAAAACTGGATGAGCCATTTGATCAAATATTTGAGAGATGGGATCTTGCCTACTGAAAAGATAGAGGCCCAGCAG
CTACAACGACGAGCAGCCAGATACGTTCTTAAAGACGACAATCTAGAACAAAAACGACCCGAGACGAGACAATTGAAGCCCGAGATCATCGACTGGGGGAGACCG
ACCCACGACGTAACGGGTCGGCCCAAAGGACGACCTAGAGACGAGGTCGTCATGGCGCCTCGGCGCCTACTTCTCAACAATCGCCTTCGGGCCAAGATACTATGT
GGGCCTCCTTCGCTCGGATCTACATCAGGAGGTTAA
Protein sequenceShow/hide protein sequence
MDIDEQGQLKENWMSHLIKYLRDGILPTEKIEAQQLQRRAARYVLKDDNLEQKRPETRQLKPEIIDWGRPTHDVTGRPKGRPRDEVVMAPRRLLLNNRLRAKILC
GPPSLGSTSGG