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Moc10g14010 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g14010
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionEnzymatic polyprotein
Genome locationchr10:10742540..10743596
RNA-Seq ExpressionMoc10g14010
SyntenyMoc10g14010
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056776.1 Enzymatic polyprotein [Cucumis melo var. makuwa]3.7e-1433.16Show/hide
Query:  TINDSIDWDSLTYRDISNIVKAICLNMCKELKTQKKIVKNPCYRIELNAFCKKYGHEVSEPSRPRKKNKRMTDHRYQKYRDNKYKGKFLKRHTSNKRQSN
        ++N  IDW +LTY DIS+ V+ IC+N+C E K   K++K+  YR EL  FCK+YG         +KK KR +  ++  +R +K K +   R    +R  N
Subjt:  TINDSIDWDSLTYRDISNIVKAICLNMCKELKTQKKIVKNPCYRIELNAFCKKYGHEVSEPSRPRKKNKRMTDHRYQKYRDNKYKGKFLKRHTSNKRQSN

Query:  QRTSKRQTKGDWNQVKCFKCKKRGHFANKCPSSKKATKHKVNEIDADNL---NKSDHESDEESESTQKPATIQDLQGEIKTLKQELW
        +  SK+      + + CFKC ++GH+AN+CP   K     ++E    +L    +SD ++  ++ES+ +   I  LQ E  + ++E +
Subjt:  QRTSKRQTKGDWNQVKCFKCKKRGHFANKCPSSKKATKHKVNEIDADNL---NKSDHESDEESESTQKPATIQDLQGEIKTLKQELW

KAA0057417.1 Enzymatic polyprotein [Cucumis melo var. makuwa]2.4e-1330.48Show/hide
Query:  TINDSIDWDSLTYRDISNIVKAICLNMCKELKTQKKIVKNPCYRIELNAFCKKYGHEVSEPSRPRKKNKRMTDHRYQKYRDNKYKGKFLKRHTSNKRQSN
        ++N  IDW +LTY DIS+ V+ IC+N+C E K   K++K+  YR EL  FCK+YG         +KK K  +   +++ +    +    ++H  NK +  
Subjt:  TINDSIDWDSLTYRDISNIVKAICLNMCKELKTQKKIVKNPCYRIELNAFCKKYGHEVSEPSRPRKKNKRMTDHRYQKYRDNKYKGKFLKRHTSNKRQSN

Query:  QRTSKRQTKGDWNQVKCFKCKKRGHFANKCPSSKKATKHKVNEIDADNL---NKSDHESDEESESTQKPATIQDLQGEIKTLKQELW
        +R S +          CFKC ++GH+AN+CP   K     ++E    ++    +SD ++  ++ES+ +   I  LQ E  + ++E +
Subjt:  QRTSKRQTKGDWNQVKCFKCKKRGHFANKCPSSKKATKHKVNEIDADNL---NKSDHESDEESESTQKPATIQDLQGEIKTLKQELW

KAA0068171.1 Enzymatic polyprotein [Cucumis melo var. makuwa]4.8e-1431.55Show/hide
Query:  TINDSIDWDSLTYRDISNIVKAICLNMCKELKTQKKIVKNPCYRIELNAFCKKYGHEVSEPSRPRKKNKRMTDHRYQKYRDNKYKGKFLKRHTSNKRQSN
        ++N  IDW +LTY DIS+ ++ IC+N+C E K   K++K+  YR EL  FCK+YG         +KK KR +  ++ +   ++      +RH    +   
Subjt:  TINDSIDWDSLTYRDISNIVKAICLNMCKELKTQKKIVKNPCYRIELNAFCKKYGHEVSEPSRPRKKNKRMTDHRYQKYRDNKYKGKFLKRHTSNKRQSN

Query:  QRTSKRQTKGDWNQVKCFKCKKRGHFANKCPSSKKATKHKVNEIDADNL---NKSDHESDEESESTQKPATIQDLQGEIKTLKQELW
        + +SK  T        CFKC ++GH+AN+CP   K     V+E    +L    ++D E+  ++ES+ +   I  LQ E  + ++E +
Subjt:  QRTSKRQTKGDWNQVKCFKCKKRGHFANKCPSSKKATKHKVNEIDADNL---NKSDHESDEESESTQKPATIQDLQGEIKTLKQELW

TYJ97599.1 Enzymatic polyprotein [Cucumis melo var. makuwa]2.8e-1433.16Show/hide
Query:  TINDSIDWDSLTYRDISNIVKAICLNMCKELKTQKKIVKNPCYRIELNAFCKKYGHEVSEPSRPRKKNKRMTDHRYQKYRDNKYKGKFLKRHTSNKRQSN
        ++N  IDW +LTY DIS+ V+ IC+N+C E K   K++K+  YR EL  FCK+YG         +KK KR +  ++ +    K K K  +     KR  N
Subjt:  TINDSIDWDSLTYRDISNIVKAICLNMCKELKTQKKIVKNPCYRIELNAFCKKYGHEVSEPSRPRKKNKRMTDHRYQKYRDNKYKGKFLKRHTSNKRQSN

Query:  QRTSKRQTKGDWNQVKCFKCKKRGHFANKCPSSKKATKHKVNEIDADNL---NKSDHESDEESESTQKPATIQDLQGEIKTLKQELW
        +  SK+      + + CFKC ++GH+AN+CP   K     ++E    +L    +SD ++  ++ES+ +   I  LQ E  + ++E +
Subjt:  QRTSKRQTKGDWNQVKCFKCKKRGHFANKCPSSKKATKHKVNEIDADNL---NKSDHESDEESESTQKPATIQDLQGEIKTLKQELW

TYK21091.1 Enzymatic polyprotein [Cucumis melo var. makuwa]4.8e-1431.55Show/hide
Query:  TINDSIDWDSLTYRDISNIVKAICLNMCKELKTQKKIVKNPCYRIELNAFCKKYGHEVSEPSRPRKKNKRMTDHRYQKYRDNKYKGKFLKRHTSNKRQSN
        ++N  IDW +LTY DIS+ ++ IC+N+C E K   K++K+  YR EL  FCK+YG         +KK KR +  ++ +   ++      +RH    +   
Subjt:  TINDSIDWDSLTYRDISNIVKAICLNMCKELKTQKKIVKNPCYRIELNAFCKKYGHEVSEPSRPRKKNKRMTDHRYQKYRDNKYKGKFLKRHTSNKRQSN

Query:  QRTSKRQTKGDWNQVKCFKCKKRGHFANKCPSSKKATKHKVNEIDADNL---NKSDHESDEESESTQKPATIQDLQGEIKTLKQELW
        + +SK  T        CFKC ++GH+AN+CP   K     V+E    +L    ++D E+  ++ES+ +   I  LQ E  + ++E +
Subjt:  QRTSKRQTKGDWNQVKCFKCKKRGHFANKCPSSKKATKHKVNEIDADNL---NKSDHESDEESESTQKPATIQDLQGEIKTLKQELW

TrEMBL top hitse value%identityAlignment
A0A5A7UR29 Enzymatic polyprotein1.8e-1433.16Show/hide
Query:  TINDSIDWDSLTYRDISNIVKAICLNMCKELKTQKKIVKNPCYRIELNAFCKKYGHEVSEPSRPRKKNKRMTDHRYQKYRDNKYKGKFLKRHTSNKRQSN
        ++N  IDW +LTY DIS+ V+ IC+N+C E K   K++K+  YR EL  FCK+YG         +KK KR +  ++  +R +K K +   R    +R  N
Subjt:  TINDSIDWDSLTYRDISNIVKAICLNMCKELKTQKKIVKNPCYRIELNAFCKKYGHEVSEPSRPRKKNKRMTDHRYQKYRDNKYKGKFLKRHTSNKRQSN

Query:  QRTSKRQTKGDWNQVKCFKCKKRGHFANKCPSSKKATKHKVNEIDADNL---NKSDHESDEESESTQKPATIQDLQGEIKTLKQELW
        +  SK+      + + CFKC ++GH+AN+CP   K     ++E    +L    +SD ++  ++ES+ +   I  LQ E  + ++E +
Subjt:  QRTSKRQTKGDWNQVKCFKCKKRGHFANKCPSSKKATKHKVNEIDADNL---NKSDHESDEESESTQKPATIQDLQGEIKTLKQELW

A0A5A7URX9 Enzymatic polyprotein1.2e-1330.48Show/hide
Query:  TINDSIDWDSLTYRDISNIVKAICLNMCKELKTQKKIVKNPCYRIELNAFCKKYGHEVSEPSRPRKKNKRMTDHRYQKYRDNKYKGKFLKRHTSNKRQSN
        ++N  IDW +LTY DIS+ V+ IC+N+C E K   K++K+  YR EL  FCK+YG         +KK K  +   +++ +    +    ++H  NK +  
Subjt:  TINDSIDWDSLTYRDISNIVKAICLNMCKELKTQKKIVKNPCYRIELNAFCKKYGHEVSEPSRPRKKNKRMTDHRYQKYRDNKYKGKFLKRHTSNKRQSN

Query:  QRTSKRQTKGDWNQVKCFKCKKRGHFANKCPSSKKATKHKVNEIDADNL---NKSDHESDEESESTQKPATIQDLQGEIKTLKQELW
        +R S +          CFKC ++GH+AN+CP   K     ++E    ++    +SD ++  ++ES+ +   I  LQ E  + ++E +
Subjt:  QRTSKRQTKGDWNQVKCFKCKKRGHFANKCPSSKKATKHKVNEIDADNL---NKSDHESDEESESTQKPATIQDLQGEIKTLKQELW

A0A5A7VRE0 Reverse transcriptase2.3e-1431.55Show/hide
Query:  TINDSIDWDSLTYRDISNIVKAICLNMCKELKTQKKIVKNPCYRIELNAFCKKYGHEVSEPSRPRKKNKRMTDHRYQKYRDNKYKGKFLKRHTSNKRQSN
        ++N  IDW +LTY DIS+ ++ IC+N+C E K   K++K+  YR EL  FCK+YG         +KK KR +  ++ +   ++      +RH    +   
Subjt:  TINDSIDWDSLTYRDISNIVKAICLNMCKELKTQKKIVKNPCYRIELNAFCKKYGHEVSEPSRPRKKNKRMTDHRYQKYRDNKYKGKFLKRHTSNKRQSN

Query:  QRTSKRQTKGDWNQVKCFKCKKRGHFANKCPSSKKATKHKVNEIDADNL---NKSDHESDEESESTQKPATIQDLQGEIKTLKQELW
        + +SK  T        CFKC ++GH+AN+CP   K     V+E    +L    ++D E+  ++ES+ +   I  LQ E  + ++E +
Subjt:  QRTSKRQTKGDWNQVKCFKCKKRGHFANKCPSSKKATKHKVNEIDADNL---NKSDHESDEESESTQKPATIQDLQGEIKTLKQELW

A0A5D3BEY3 Enzymatic polyprotein1.4e-1433.16Show/hide
Query:  TINDSIDWDSLTYRDISNIVKAICLNMCKELKTQKKIVKNPCYRIELNAFCKKYGHEVSEPSRPRKKNKRMTDHRYQKYRDNKYKGKFLKRHTSNKRQSN
        ++N  IDW +LTY DIS+ V+ IC+N+C E K   K++K+  YR EL  FCK+YG         +KK KR +  ++ +    K K K  +     KR  N
Subjt:  TINDSIDWDSLTYRDISNIVKAICLNMCKELKTQKKIVKNPCYRIELNAFCKKYGHEVSEPSRPRKKNKRMTDHRYQKYRDNKYKGKFLKRHTSNKRQSN

Query:  QRTSKRQTKGDWNQVKCFKCKKRGHFANKCPSSKKATKHKVNEIDADNL---NKSDHESDEESESTQKPATIQDLQGEIKTLKQELW
        +  SK+      + + CFKC ++GH+AN+CP   K     ++E    +L    +SD ++  ++ES+ +   I  LQ E  + ++E +
Subjt:  QRTSKRQTKGDWNQVKCFKCKKRGHFANKCPSSKKATKHKVNEIDADNL---NKSDHESDEESESTQKPATIQDLQGEIKTLKQELW

A0A5D3DBS1 Reverse transcriptase2.3e-1431.55Show/hide
Query:  TINDSIDWDSLTYRDISNIVKAICLNMCKELKTQKKIVKNPCYRIELNAFCKKYGHEVSEPSRPRKKNKRMTDHRYQKYRDNKYKGKFLKRHTSNKRQSN
        ++N  IDW +LTY DIS+ ++ IC+N+C E K   K++K+  YR EL  FCK+YG         +KK KR +  ++ +   ++      +RH    +   
Subjt:  TINDSIDWDSLTYRDISNIVKAICLNMCKELKTQKKIVKNPCYRIELNAFCKKYGHEVSEPSRPRKKNKRMTDHRYQKYRDNKYKGKFLKRHTSNKRQSN

Query:  QRTSKRQTKGDWNQVKCFKCKKRGHFANKCPSSKKATKHKVNEIDADNL---NKSDHESDEESESTQKPATIQDLQGEIKTLKQELW
        + +SK  T        CFKC ++GH+AN+CP   K     V+E    +L    ++D E+  ++ES+ +   I  LQ E  + ++E +
Subjt:  QRTSKRQTKGDWNQVKCFKCKKRGHFANKCPSSKKATKHKVNEIDADNL---NKSDHESDEESESTQKPATIQDLQGEIKTLKQELW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCATCAACGACAGTATCGACTGGGATTCTCTCACATATAGAGATATCAGTAATATTGTCAAAGCCATCTGTCTCAACATGTGCAAAGAGTTAAAAACTCAA
AAGAAGATTGTGAAGAATCCTTGTTACAGAATTGAATTGAATGCTTTCTGCAAGAAATACGGACATGAAGTTTCCGAGCCATCAAGACCTCGGAAGAAAAACAAG
CGGATGACTGATCATCGCTATCAGAAATACCGCGACAACAAGTATAAAGGGAAGTTCCTCAAACGACATACTTCCAACAAGAGACAATCTAATCAAAGAACGTCC
AAGCGACAAACTAAGGGAGATTGGAATCAAGTAAAATGCTTCAAATGCAAGAAACGAGGGCACTTTGCCAACAAATGCCCATCGTCGAAGAAAGCCACGAAGCAT
AAAGTCAATGAGATTGATGCTGACAATCTCAACAAGTCTGATCATGAATCTGATGAAGAATCAGAATCAACCCAGAAACCAGCCACTATTCAAGACTTGCAAGGA
GAAATCAAAACTCTAAAGCAAGAATTATGGGAAGATCGATTAAGACTACATGATCTCGAAACTGCTGTTGAGCTTTTACAAAATCAGAAAGAGATCCTAAAGTCT
GACATAAGGAATCAAACGACCTATGCTCAAGATGATGCATTCTTTGCATATGATGGTGAACGAGAAACTTCACATAATCTTGAGGATACTACCGGACAAGTTAAT
TCATAA
mRNA sequenceShow/hide mRNA sequence
ATGACCATCAACGACAGTATCGACTGGGATTCTCTCACATATAGAGATATCAGTAATATTGTCAAAGCCATCTGTCTCAACATGTGCAAAGAGTTAAAAACTCAA
AAGAAGATTGTGAAGAATCCTTGTTACAGAATTGAATTGAATGCTTTCTGCAAGAAATACGGACATGAAGTTTCCGAGCCATCAAGACCTCGGAAGAAAAACAAG
CGGATGACTGATCATCGCTATCAGAAATACCGCGACAACAAGTATAAAGGGAAGTTCCTCAAACGACATACTTCCAACAAGAGACAATCTAATCAAAGAACGTCC
AAGCGACAAACTAAGGGAGATTGGAATCAAGTAAAATGCTTCAAATGCAAGAAACGAGGGCACTTTGCCAACAAATGCCCATCGTCGAAGAAAGCCACGAAGCAT
AAAGTCAATGAGATTGATGCTGACAATCTCAACAAGTCTGATCATGAATCTGATGAAGAATCAGAATCAACCCAGAAACCAGCCACTATTCAAGACTTGCAAGGA
GAAATCAAAACTCTAAAGCAAGAATTATGGGAAGATCGATTAAGACTACATGATCTCGAAACTGCTGTTGAGCTTTTACAAAATCAGAAAGAGATCCTAAAGTCT
GACATAAGGAATCAAACGACCTATGCTCAAGATGATGCATTCTTTGCATATGATGGTGAACGAGAAACTTCACATAATCTTGAGGATACTACCGGACAAGTTAAT
TCATAA
Protein sequenceShow/hide protein sequence
MTINDSIDWDSLTYRDISNIVKAICLNMCKELKTQKKIVKNPCYRIELNAFCKKYGHEVSEPSRPRKKNKRMTDHRYQKYRDNKYKGKFLKRHTSNKRQSNQRTS
KRQTKGDWNQVKCFKCKKRGHFANKCPSSKKATKHKVNEIDADNLNKSDHESDEESESTQKPATIQDLQGEIKTLKQELWEDRLRLHDLETAVELLQNQKEILKS
DIRNQTTYAQDDAFFAYDGERETSHNLEDTTGQVNS